RNA–Protein interactions for RNA: ENST00000553388.1

PSMD10-207, Transcript of proteasome 26S subunit, non-ATPase 10, humanhuman

TSL 1 (best)

Gene PSMD10, Length 1,039 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD10-207ENST00000553388 WNT2BQ93097 391 aa13.43□□□□□ -0.26
PSMD10-207ENST00000553388 AMER1Q5JTC6 1135 aaPredicted RBP13.42□□□□□ -0.26
PSMD10-207ENST00000553388 RABGEF1Q9UJ41 708 aa13.42□□□□□ -0.26
PSMD10-207ENST00000553388 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
PSMD10-207ENST00000553388 GOLGA8CPA6NN73 597 aa13.4□□□□□ -0.26
PSMD10-207ENST00000553388 EPAS1Q99814 870 aa13.4□□□□□ -0.26
PSMD10-207ENST00000553388 DDX12PQ92771 950 aa13.39□□□□□ -0.27
PSMD10-207ENST00000553388 NBPF3Q9H094 633 aa13.39□□□□□ -0.27
PSMD10-207ENST00000553388 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
PSMD10-207ENST00000553388 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
PSMD10-207ENST00000553388 KIAA1468Q9P260 1216 aa13.36□□□□□ -0.27
PSMD10-207ENST00000553388 PDIA6Q15084 440 aa13.34□□□□□ -0.27
PSMD10-207ENST00000553388 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
PSMD10-207ENST00000553388 ONECUT3O60422 494 aaPredicted RBP13.33□□□□□ -0.28
PSMD10-207ENST00000553388 CFAP44Q96MT7 982 aa13.33□□□□□ -0.28
PSMD10-207ENST00000553388 IFFO2Q5TF58 517 aa13.3□□□□□ -0.28
PSMD10-207ENST00000553388 LAPTM4BQ86VI4 370 aa13.3□□□□□ -0.28
PSMD10-207ENST00000553388 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
PSMD10-207ENST00000553388 E2F4Q16254 413 aa13.29□□□□□ -0.28
PSMD10-207ENST00000553388 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
PSMD10-207ENST00000553388 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
PSMD10-207ENST00000553388 BCAMP50895 628 aa13.28□□□□□ -0.28
PSMD10-207ENST00000553388 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
PSMD10-207ENST00000553388 SEPT9Q9UHD8 586 aaPredicted RBP13.28□□□□□ -0.28
PSMD10-207ENST00000553388 ARIH1Q9Y4X5 557 aaPredicted RBP13.28□□□□□ -0.28
PSMD10-207ENST00000553388 SPDYE16A6NNV3 312 aaPredicted RBP13.27□□□□□ -0.29
PSMD10-207ENST00000553388 NBR1Q14596 966 aa13.27□□□□□ -0.29
PSMD10-207ENST00000553388 ZFRQ96KR1 1074 aaKnown RBP13.27□□□□□ -0.29
PSMD10-207ENST00000553388 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
PSMD10-207ENST00000553388 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
PSMD10-207ENST00000553388 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
PSMD10-207ENST00000553388 MAP3K7O43318 606 aa13.22□□□□□ -0.29
PSMD10-207ENST00000553388 FAM98CQ17RN3 349 aaKnown RBP13.19□□□□□ -0.3
PSMD10-207ENST00000553388 WDR70Q9NW82 654 aa13.19□□□□□ -0.3
PSMD10-207ENST00000553388 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
PSMD10-207ENST00000553388 FAM198AQ9UFP1 575 aa13.19□□□□□ -0.3
PSMD10-207ENST00000553388 A0A0G2JS52 829 aa13.18□□□□□ -0.3
PSMD10-207ENST00000553388 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
PSMD10-207ENST00000553388 C3orf80F5H4A9 247 aa13.17□□□□□ -0.3
PSMD10-207ENST00000553388 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
PSMD10-207ENST00000553388 OSBPP22059 807 aa13.16□□□□□ -0.3
PSMD10-207ENST00000553388 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
PSMD10-207ENST00000553388 PACS2Q86VP3 889 aa13.14□□□□□ -0.31
PSMD10-207ENST00000553388 PRSS12P56730 875 aa13.13□□□□□ -0.31
PSMD10-207ENST00000553388 SMAPO00193 183 aa13.12□□□□□ -0.31
PSMD10-207ENST00000553388 RGS20O76081 388 aa13.12□□□□□ -0.31
PSMD10-207ENST00000553388 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
PSMD10-207ENST00000553388 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
PSMD10-207ENST00000553388 NYAP1Q6ZVC0 841 aa13.1□□□□□ -0.31
PSMD10-207ENST00000553388 TSR3Q9UJK0 312 aaKnown RBP13.1□□□□□ -0.31
PSMD10-207ENST00000553388 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
PSMD10-207ENST00000553388 TSHZ2Q9NRE2 1034 aa13.09□□□□□ -0.31
PSMD10-207ENST00000553388 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
PSMD10-207ENST00000553388 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
PSMD10-207ENST00000553388 TATDN2Q93075 761 aa13.06□□□□□ -0.32
PSMD10-207ENST00000553388 NPDC1Q9NQX5 325 aaPredicted RBP13.06□□□□□ -0.32
PSMD10-207ENST00000553388 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
PSMD10-207ENST00000553388 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
PSMD10-207ENST00000553388 KCNC4Q03721 635 aa13.02□□□□□ -0.33
PSMD10-207ENST00000553388 TTC13Q8NBP0 860 aa13.01□□□□□ -0.33
PSMD10-207ENST00000553388 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
PSMD10-207ENST00000553388 PPP4CP60510 307 aa12.99□□□□□ -0.33
PSMD10-207ENST00000553388 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
PSMD10-207ENST00000553388 NBPF26B4DH59 902 aa12.97□□□□□ -0.33
PSMD10-207ENST00000553388 MLLT3P42568 568 aaPredicted RBP12.97□□□□□ -0.33
PSMD10-207ENST00000553388 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
PSMD10-207ENST00000553388 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
PSMD10-207ENST00000553388 PADI6Q6TGC4 694 aa12.95□□□□□ -0.34
PSMD10-207ENST00000553388 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
PSMD10-207ENST00000553388 IRX2Q9BZI1 471 aaPredicted RBP12.94□□□□□ -0.34
PSMD10-207ENST00000553388 EYA1Q99502 592 aa12.89□□□□□ -0.35
PSMD10-207ENST00000553388 MTRQ99707 1265 aa12.88□□□□□ -0.35
PSMD10-207ENST00000553388 APLP1P51693 650 aa12.87□□□□□ -0.35
PSMD10-207ENST00000553388 SWT1Q5T5J6 900 aaKnown RBP12.87□□□□□ -0.35
PSMD10-207ENST00000553388 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
PSMD10-207ENST00000553388 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
PSMD10-207ENST00000553388 PTGDRQ13258 359 aa12.84□□□□□ -0.35
PSMD10-207ENST00000553388 RNF40O75150 1001 aa12.83□□□□□ -0.36
PSMD10-207ENST00000553388 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
PSMD10-207ENST00000553388 PPP1R18Q6NYC8 613 aa12.78□□□□□ -0.36
PSMD10-207ENST00000553388 NKX2-3Q8TAU0 364 aa12.78□□□□□ -0.36
PSMD10-207ENST00000553388 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
PSMD10-207ENST00000553388 SEMA3EO15041 775 aa12.76□□□□□ -0.37
PSMD10-207ENST00000553388 ADGRG1Q9Y653 693 aa12.75□□□□□ -0.37
PSMD10-207ENST00000553388 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
PSMD10-207ENST00000553388 NUTM2FA1L443 756 aa12.72□□□□□ -0.37
PSMD10-207ENST00000553388 COPS2P61201 443 aa12.72□□□□□ -0.37
PSMD10-207ENST00000553388 PRKD2Q9BZL6 878 aa12.71□□□□□ -0.37
PSMD10-207ENST00000553388 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.71□□□□□ -0.37
PSMD10-207ENST00000553388 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
PSMD10-207ENST00000553388 DNAJB2P25686 324 aa12.69□□□□□ -0.38
PSMD10-207ENST00000553388 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
PSMD10-207ENST00000553388 LCE2BO14633 110 aa12.68□□□□□ -0.38
PSMD10-207ENST00000553388 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
PSMD10-207ENST00000553388 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
PSMD10-207ENST00000553388 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
PSMD10-207ENST00000553388 ZPR1O75312 459 aa12.67□□□□□ -0.38
PSMD10-207ENST00000553388 Q6ZNB5 142 aa12.67□□□□□ -0.38
PSMD10-207ENST00000553388 FCHSD2O94868 740 aa12.65□□□□□ -0.38
PSMD10-207ENST00000553388 GFRA3O60609 400 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms