RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 CENPQQ7L2Z9 268 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-208ENST00000553289 JPH4Q96JJ6 628 aa14.4□□□□□ -0.1
SYNE2-208ENST00000553289 USP35Q9P2H5 1018 aa14.39□□□□□ -0.11
SYNE2-208ENST00000553289 ZBED9Q6R2W3 1325 aa14.39□□□□□ -0.11
SYNE2-208ENST00000553289 ST18O60284 1047 aa14.38□□□□□ -0.11
SYNE2-208ENST00000553289 CCDC146Q8IYE0 955 aa14.38□□□□□ -0.11
SYNE2-208ENST00000553289 E9PSI1 815 aa14.38□□□□□ -0.11
SYNE2-208ENST00000553289 ST20-MTHFSA0A0A6YYL1 179 aa14.37□□□□□ -0.11
SYNE2-208ENST00000553289 PRKRIP1Q9H875 184 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-208ENST00000553289 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
SYNE2-208ENST00000553289 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
SYNE2-208ENST00000553289 PHF14O94880 888 aa14.36□□□□□ -0.11
SYNE2-208ENST00000553289 PANK3Q9H999 370 aa14.36□□□□□ -0.11
SYNE2-208ENST00000553289 KIF3AQ9Y496 699 aa14.36□□□□□ -0.11
SYNE2-208ENST00000553289 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
SYNE2-208ENST00000553289 NGDNQ8NEJ9 315 aaKnown RBP14.35□□□□□ -0.11
SYNE2-208ENST00000553289 CLUAP1Q96AJ1 413 aa14.35□□□□□ -0.11
SYNE2-208ENST00000553289 GZF1Q9H116 711 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-208ENST00000553289 USP47Q96K76 1375 aa14.35□□□□□ -0.11
SYNE2-208ENST00000553289 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
SYNE2-208ENST00000553289 AMPHP49418 695 aa14.35□□□□□ -0.11
SYNE2-208ENST00000553289 CHMP4CQ96CF2 233 aa14.35□□□□□ -0.11
SYNE2-208ENST00000553289 VGFO15240 615 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-208ENST00000553289 EVC2Q86UK5 1308 aa14.34□□□□□ -0.11
SYNE2-208ENST00000553289 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
SYNE2-208ENST00000553289 STAC3Q96MF2 364 aa14.34□□□□□ -0.11
SYNE2-208ENST00000553289 TAF7LQ5H9L4 462 aa14.33□□□□□ -0.12
SYNE2-208ENST00000553289 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
SYNE2-208ENST00000553289 SLC4A10Q6U841 1118 aa14.33□□□□□ -0.12
SYNE2-208ENST00000553289 TRAK1Q9UPV9 953 aa14.33□□□□□ -0.12
SYNE2-208ENST00000553289 RRP1P56182 461 aaKnown RBP14.32□□□□□ -0.12
SYNE2-208ENST00000553289 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
SYNE2-208ENST00000553289 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
SYNE2-208ENST00000553289 HSP90B1P14625 803 aaKnown RBP14.32□□□□□ -0.12
SYNE2-208ENST00000553289 MYOM3Q5VTT5 1437 aa14.31□□□□□ -0.12
SYNE2-208ENST00000553289 KIF16BQ96L93 1317 aa14.31□□□□□ -0.12
SYNE2-208ENST00000553289 CUX1P39880 1505 aa14.31□□□□□ -0.12
SYNE2-208ENST00000553289 PTPRGP23470 1445 aa14.3□□□□□ -0.12
SYNE2-208ENST00000553289 ZNF330Q9Y3S2 320 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-208ENST00000553289 TMX4Q9H1E5 349 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-208ENST00000553289 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
SYNE2-208ENST00000553289 SKOR2Q2VWA4 1001 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-208ENST00000553289 COG3Q96JB2 828 aa14.29□□□□□ -0.12
SYNE2-208ENST00000553289 PDE4AP27815 886 aa14.28□□□□□ -0.12
SYNE2-208ENST00000553289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
SYNE2-208ENST00000553289 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
SYNE2-208ENST00000553289 RUSC2Q8N2Y8 1516 aa14.28□□□□□ -0.12
SYNE2-208ENST00000553289 CLSTN1O94985 981 aa14.27□□□□□ -0.13
SYNE2-208ENST00000553289 AAMPQ13685 434 aa14.26□□□□□ -0.13
SYNE2-208ENST00000553289 DDX19BQ9UMR2 479 aa14.26□□□□□ -0.13
SYNE2-208ENST00000553289 RRP7AQ9Y3A4 280 aaKnown RBP14.25□□□□□ -0.13
SYNE2-208ENST00000553289 FGD6Q6ZV73 1430 aa14.25□□□□□ -0.13
SYNE2-208ENST00000553289 NUTM2DQ5VT03 806 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-208ENST00000553289 ROCK1Q13464 1354 aa14.24□□□□□ -0.13
SYNE2-208ENST00000553289 MIA2Q96PC5 1412 aa14.24□□□□□ -0.13
SYNE2-208ENST00000553289 EXOC6Q8TAG9 804 aa14.23□□□□□ -0.13
SYNE2-208ENST00000553289 ANKRD45Q5TZF3 282 aa14.23□□□□□ -0.13
SYNE2-208ENST00000553289 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
SYNE2-208ENST00000553289 FANCIQ9NVI1 1328 aa14.23□□□□□ -0.13
SYNE2-208ENST00000553289 LRRFIP1Q32MZ4 808 aaKnown RBP14.23□□□□□ -0.13
SYNE2-208ENST00000553289 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
SYNE2-208ENST00000553289 GAPVD1Q14C86 1478 aa14.22□□□□□ -0.13
SYNE2-208ENST00000553289 REC8O95072 547 aa14.22□□□□□ -0.13
SYNE2-208ENST00000553289 IGF1RP08069 1367 aa14.22□□□□□ -0.13
SYNE2-208ENST00000553289 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.13
SYNE2-208ENST00000553289 RUFY2Q8WXA3 655 aa14.21□□□□□ -0.13
SYNE2-208ENST00000553289 SF3A1Q15459 793 aaKnown RBP14.21□□□□□ -0.13
SYNE2-208ENST00000553289 DIAPH1O60610 1272 aaKnown RBP14.21□□□□□ -0.14
SYNE2-208ENST00000553289 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.14
SYNE2-208ENST00000553289 APAF1O14727 1248 aa14.2□□□□□ -0.14
SYNE2-208ENST00000553289 CCDC7Q96M83 1385 aa14.2□□□□□ -0.14
SYNE2-208ENST00000553289 LTV1Q96GA3 475 aaPredicted RBP14.2□□□□□ -0.14
SYNE2-208ENST00000553289 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
SYNE2-208ENST00000553289 RASSF8Q8NHQ8 419 aa14.2□□□□□ -0.14
SYNE2-208ENST00000553289 NOL8Q76FK4 1167 aaKnown RBP14.2□□□□□ -0.14
SYNE2-208ENST00000553289 NOC3LQ8WTT2 800 aaKnown RBP14.19□□□□□ -0.14
SYNE2-208ENST00000553289 COG6Q9Y2V7 657 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 DDX49Q9Y6V7 483 aaKnown RBP14.19□□□□□ -0.14
SYNE2-208ENST00000553289 CNTLNQ9NXG0 1405 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 H3BQV1 296 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 TEFQ10587 303 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 DZIP1LQ8IYY4 767 aaKnown RBP14.19□□□□□ -0.14
SYNE2-208ENST00000553289 RUNDC1Q96C34 613 aa14.19□□□□□ -0.14
SYNE2-208ENST00000553289 GOLGA6L1Q8N7Z2 621 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 PLIN1O60240 522 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 NEXNQ0ZGT2 675 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 TPM3P06753 285 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 GSE1Q14687 1217 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 FAM184AQ8NB25 1140 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
SYNE2-208ENST00000553289 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
SYNE2-208ENST00000553289 LRRC9Q6ZRR7 1453 aa14.17□□□□□ -0.14
SYNE2-208ENST00000553289 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.17□□□□□ -0.14
SYNE2-208ENST00000553289 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
SYNE2-208ENST00000553289 KIF21BO75037 1637 aa14.16□□□□□ -0.14
SYNE2-208ENST00000553289 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
SYNE2-208ENST00000553289 CASKIN1Q8WXD9 1431 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms