RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
PRKCH-204ENST00000553265 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
PRKCH-204ENST00000553265 AK7Q96M32 723 aa11.83□□□□□ -0.52
PRKCH-204ENST00000553265 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
PRKCH-204ENST00000553265 EPAS1Q99814 870 aa11.82□□□□□ -0.52
PRKCH-204ENST00000553265 GNPATO15228 680 aa11.81□□□□□ -0.52
PRKCH-204ENST00000553265 PTGDRQ13258 359 aa11.81□□□□□ -0.52
PRKCH-204ENST00000553265 GPR153Q6NV75 609 aa11.81□□□□□ -0.52
PRKCH-204ENST00000553265 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
PRKCH-204ENST00000553265 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
PRKCH-204ENST00000553265 SMARCA2P51531 1590 aa11.8□□□□□ -0.52
PRKCH-204ENST00000553265 TYW1BQ6NUM6 668 aa11.8□□□□□ -0.52
PRKCH-204ENST00000553265 FOSBP53539 338 aa11.79□□□□□ -0.52
PRKCH-204ENST00000553265 HIC1Q14526 733 aa11.79□□□□□ -0.52
PRKCH-204ENST00000553265 CCDC102AQ96A19 550 aa11.79□□□□□ -0.52
PRKCH-204ENST00000553265 ERCC6Q03468 1493 aa11.78□□□□□ -0.52
PRKCH-204ENST00000553265 MAP2K5Q13163 448 aa11.78□□□□□ -0.52
PRKCH-204ENST00000553265 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
PRKCH-204ENST00000553265 GPBP1L1Q9HC44 474 aaPredicted RBP11.78□□□□□ -0.52
PRKCH-204ENST00000553265 TRIM66O15016 1216 aa11.77□□□□□ -0.53
PRKCH-204ENST00000553265 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
PRKCH-204ENST00000553265 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
PRKCH-204ENST00000553265 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
PRKCH-204ENST00000553265 NPDC1Q9NQX5 325 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-204ENST00000553265 NESP48681 1621 aa11.75□□□□□ -0.53
PRKCH-204ENST00000553265 FBXW7Q969H0 707 aa11.74□□□□□ -0.53
PRKCH-204ENST00000553265 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
PRKCH-204ENST00000553265 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
PRKCH-204ENST00000553265 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
PRKCH-204ENST00000553265 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
PRKCH-204ENST00000553265 BAZ1AQ9NRL2 1556 aaPredicted RBP11.74□□□□□ -0.53
PRKCH-204ENST00000553265 IRF6O14896 467 aa11.73□□□□□ -0.53
PRKCH-204ENST00000553265 PDE4DQ08499 809 aa11.73□□□□□ -0.53
PRKCH-204ENST00000553265 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
PRKCH-204ENST00000553265 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
PRKCH-204ENST00000553265 SNPHO15079 494 aa11.7□□□□□ -0.54
PRKCH-204ENST00000553265 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
PRKCH-204ENST00000553265 LHX8Q68G74 356 aa11.7□□□□□ -0.54
PRKCH-204ENST00000553265 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
PRKCH-204ENST00000553265 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
PRKCH-204ENST00000553265 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
PRKCH-204ENST00000553265 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
PRKCH-204ENST00000553265 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
PRKCH-204ENST00000553265 LAMC3Q9Y6N6 1575 aa11.66□□□□□ -0.54
PRKCH-204ENST00000553265 KIF21AQ7Z4S6 1674 aa11.65□□□□□ -0.54
PRKCH-204ENST00000553265 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
PRKCH-204ENST00000553265 PARP9Q8IXQ6 854 aa11.63□□□□□ -0.55
PRKCH-204ENST00000553265 COL9A1P20849 921 aa11.62□□□□□ -0.55
PRKCH-204ENST00000553265 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
PRKCH-204ENST00000553265 AMHR2Q16671 573 aa11.62□□□□□ -0.55
PRKCH-204ENST00000553265 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
PRKCH-204ENST00000553265 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
PRKCH-204ENST00000553265 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
PRKCH-204ENST00000553265 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-204ENST00000553265 CERKQ8TCT0 537 aa11.59□□□□□ -0.55
PRKCH-204ENST00000553265 PHOX2BQ99453 314 aa11.59□□□□□ -0.55
PRKCH-204ENST00000553265 CDCA7LQ96GN5 454 aa11.58□□□□□ -0.56
PRKCH-204ENST00000553265 PTPREP23469 700 aa11.57□□□□□ -0.56
PRKCH-204ENST00000553265 PRSS12P56730 875 aa11.57□□□□□ -0.56
PRKCH-204ENST00000553265 REPIN1Q9BWE0 567 aaKnown RBP11.57□□□□□ -0.56
PRKCH-204ENST00000553265 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
PRKCH-204ENST00000553265 KCNK17Q96T54 332 aa11.56□□□□□ -0.56
PRKCH-204ENST00000553265 FAM117AQ9C073 453 aa11.56□□□□□ -0.56
PRKCH-204ENST00000553265 FAM198AQ9UFP1 575 aa11.56□□□□□ -0.56
PRKCH-204ENST00000553265 ADGRG1Q9Y653 693 aa11.56□□□□□ -0.56
PRKCH-204ENST00000553265 MDM2Q00987 491 aaPredicted RBP11.55□□□□□ -0.56
PRKCH-204ENST00000553265 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
PRKCH-204ENST00000553265 RBM27Q9P2N5 1060 aaKnown RBP11.55□□□□□ -0.56
PRKCH-204ENST00000553265 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
PRKCH-204ENST00000553265 ST18O60284 1047 aa11.54□□□□□ -0.56
PRKCH-204ENST00000553265 METTL3Q86U44 580 aaKnown RBP11.54□□□□□ -0.56
PRKCH-204ENST00000553265 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
PRKCH-204ENST00000553265 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
PRKCH-204ENST00000553265 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
PRKCH-204ENST00000553265 TSKSQ9UJT2 592 aa11.52□□□□□ -0.57
PRKCH-204ENST00000553265 ERBB3P21860 1342 aa11.52□□□□□ -0.57
PRKCH-204ENST00000553265 WIZO95785 1651 aa11.52□□□□□ -0.57
PRKCH-204ENST00000553265 WDR62O43379 1518 aa11.51□□□□□ -0.57
PRKCH-204ENST00000553265 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
PRKCH-204ENST00000553265 MS4A1P11836 297 aa11.51□□□□□ -0.57
PRKCH-204ENST00000553265 PROX2Q3B8N5 592 aa11.51□□□□□ -0.57
PRKCH-204ENST00000553265 PXYLP1Q8TE99 480 aa11.51□□□□□ -0.57
PRKCH-204ENST00000553265 PDS5BQ9NTI5 1447 aa11.51□□□□□ -0.57
PRKCH-204ENST00000553265 PSEN2P49810 448 aa11.5□□□□□ -0.57
PRKCH-204ENST00000553265 EMP3P54852 163 aa11.5□□□□□ -0.57
PRKCH-204ENST00000553265 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
PRKCH-204ENST00000553265 OATP04181 439 aa11.49□□□□□ -0.57
PRKCH-204ENST00000553265 GPCPD1Q9NPB8 672 aa11.49□□□□□ -0.57
PRKCH-204ENST00000553265 CLCN1P35523 988 aa11.48□□□□□ -0.57
PRKCH-204ENST00000553265 MRC2Q9UBG0 1479 aa11.48□□□□□ -0.57
PRKCH-204ENST00000553265 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
PRKCH-204ENST00000553265 TMUB1Q9BVT8 246 aa11.47□□□□□ -0.57
PRKCH-204ENST00000553265 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
PRKCH-204ENST00000553265 CADPSQ9ULU8 1353 aa11.46□□□□□ -0.57
PRKCH-204ENST00000553265 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
PRKCH-204ENST00000553265 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
PRKCH-204ENST00000553265 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.57
PRKCH-204ENST00000553265 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.57
PRKCH-204ENST00000553265 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
PRKCH-204ENST00000553265 FAM205CA6NFA0 338 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms