RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 PBX2P40425 430 aa7.48□□□□□ -1.21
NPAS3-212ENST00000552696 TSR1Q2NL82 804 aaKnown RBP7.48□□□□□ -1.21
NPAS3-212ENST00000552696 AXIN2Q9Y2T1 843 aa7.48□□□□□ -1.21
NPAS3-212ENST00000552696 TULP1O00294 542 aaPredicted RBP7.47□□□□□ -1.21
NPAS3-212ENST00000552696 RBM26Q5T8P6 1007 aaKnown RBP7.47□□□□□ -1.21
NPAS3-212ENST00000552696 CDHR5Q9HBB8 845 aa7.47□□□□□ -1.21
NPAS3-212ENST00000552696 ARHGAP33O14559 1287 aa7.46□□□□□ -1.22
NPAS3-212ENST00000552696 PTPREP23469 700 aa7.46□□□□□ -1.22
NPAS3-212ENST00000552696 PSEN2P49810 448 aa7.46□□□□□ -1.22
NPAS3-212ENST00000552696 C6orf132Q5T0Z8 1188 aa7.46□□□□□ -1.22
NPAS3-212ENST00000552696 KCNH8Q96L42 1107 aa7.45□□□□□ -1.22
NPAS3-212ENST00000552696 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
NPAS3-212ENST00000552696 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
NPAS3-212ENST00000552696 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
NPAS3-212ENST00000552696 COL9A1P20849 921 aa7.44□□□□□ -1.22
NPAS3-212ENST00000552696 NUTM2FA1L443 756 aa7.43□□□□□ -1.22
NPAS3-212ENST00000552696 DMRTA1Q5VZB9 504 aa7.43□□□□□ -1.22
NPAS3-212ENST00000552696 LMOD2Q6P5Q4 547 aa7.43□□□□□ -1.22
NPAS3-212ENST00000552696 LSM11P83369 360 aaKnown RBP eCLIP7.42□□□□□ -1.22
NPAS3-212ENST00000552696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.42□□□□□ -1.22
NPAS3-212ENST00000552696 GPIHBP1Q8IV16 184 aa7.41□□□□□ -1.22
NPAS3-212ENST00000552696 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
NPAS3-212ENST00000552696 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.22
NPAS3-212ENST00000552696 GPR37O15354 613 aa7.39□□□□□ -1.23
NPAS3-212ENST00000552696 PTGDRQ13258 359 aa7.39□□□□□ -1.23
NPAS3-212ENST00000552696 PROX2Q3B8N5 592 aa7.39□□□□□ -1.23
NPAS3-212ENST00000552696 ANKRD13DQ6ZTN6 518 aa7.39□□□□□ -1.23
NPAS3-212ENST00000552696 FCHSD2O94868 740 aa7.38□□□□□ -1.23
NPAS3-212ENST00000552696 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
NPAS3-212ENST00000552696 CERKQ8TCT0 537 aa7.38□□□□□ -1.23
NPAS3-212ENST00000552696 PRSS12P56730 875 aa7.37□□□□□ -1.23
NPAS3-212ENST00000552696 ADGRD1Q6QNK2 874 aa7.37□□□□□ -1.23
NPAS3-212ENST00000552696 VPS9D1Q9Y2B5 631 aa7.37□□□□□ -1.23
NPAS3-212ENST00000552696 TK2O00142 265 aa7.36□□□□□ -1.23
NPAS3-212ENST00000552696 PADI6Q6TGC4 694 aa7.36□□□□□ -1.23
NPAS3-212ENST00000552696 CDCA7LQ96GN5 454 aa7.36□□□□□ -1.23
NPAS3-212ENST00000552696 SLC4A5Q9BY07 1137 aa7.36□□□□□ -1.23
NPAS3-212ENST00000552696 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
NPAS3-212ENST00000552696 HIC1Q14526 733 aa7.35□□□□□ -1.23
NPAS3-212ENST00000552696 FAM198AQ9UFP1 575 aa7.35□□□□□ -1.23
NPAS3-212ENST00000552696 TSKSQ9UJT2 592 aa7.35□□□□□ -1.23
NPAS3-212ENST00000552696 SPNS2Q8IVW8 549 aa7.34□□□□□ -1.23
NPAS3-212ENST00000552696 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
NPAS3-212ENST00000552696 GNPATO15228 680 aa7.33□□□□□ -1.24
NPAS3-212ENST00000552696 ZC3H15Q8WU90 426 aaKnown RBP7.33□□□□□ -1.24
NPAS3-212ENST00000552696 HRO43593 1189 aa7.32□□□□□ -1.24
NPAS3-212ENST00000552696 FECHP22830 423 aa7.32□□□□□ -1.24
NPAS3-212ENST00000552696 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
NPAS3-212ENST00000552696 KIAA1468Q9P260 1216 aa7.32□□□□□ -1.24
NPAS3-212ENST00000552696 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
NPAS3-212ENST00000552696 ONECUT3O60422 494 aaPredicted RBP7.31□□□□□ -1.24
NPAS3-212ENST00000552696 NBPF26B4DH59 902 aa7.3□□□□□ -1.24
NPAS3-212ENST00000552696 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
NPAS3-212ENST00000552696 PACS2Q86VP3 889 aa7.3□□□□□ -1.24
NPAS3-212ENST00000552696 NBPF3Q9H094 633 aa7.3□□□□□ -1.24
NPAS3-212ENST00000552696 SEPT9Q9UHD8 586 aaPredicted RBP7.3□□□□□ -1.24
NPAS3-212ENST00000552696 BHMG1C9JSJ3 638 aaPredicted RBP7.29□□□□□ -1.24
NPAS3-212ENST00000552696 SMAPO00193 183 aa7.29□□□□□ -1.24
NPAS3-212ENST00000552696 PNMA3Q9UL41 463 aa7.29□□□□□ -1.24
NPAS3-212ENST00000552696 ZMYND10O75800 440 aa7.28□□□□□ -1.24
NPAS3-212ENST00000552696 FAM161AQ3B820 660 aa7.28□□□□□ -1.24
NPAS3-212ENST00000552696 NUDT18Q6ZVK8 323 aa7.28□□□□□ -1.24
NPAS3-212ENST00000552696 TATDN2Q93075 761 aa7.28□□□□□ -1.24
NPAS3-212ENST00000552696 ADGRG1Q9Y653 693 aa7.28□□□□□ -1.24
NPAS3-212ENST00000552696 MAP2K5Q13163 448 aa7.27□□□□□ -1.25
NPAS3-212ENST00000552696 MRPL50Q8N5N7 158 aaKnown RBP7.27□□□□□ -1.25
NPAS3-212ENST00000552696 STAC3Q96MF2 364 aa7.27□□□□□ -1.25
NPAS3-212ENST00000552696 BARGINQ6ZT62 677 aa7.26□□□□□ -1.25
NPAS3-212ENST00000552696 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
NPAS3-212ENST00000552696 CCDC102AQ96A19 550 aa7.25□□□□□ -1.25
NPAS3-212ENST00000552696 MYT1LQ9UL68 1186 aa7.25□□□□□ -1.25
NPAS3-212ENST00000552696 LAPTM4BQ86VI4 370 aa7.24□□□□□ -1.25
NPAS3-212ENST00000552696 RBM46Q8TBY0 533 aaKnown RBP7.24□□□□□ -1.25
NPAS3-212ENST00000552696 EYA1Q99502 592 aa7.24□□□□□ -1.25
NPAS3-212ENST00000552696 GOLGA8CPA6NN73 597 aa7.23□□□□□ -1.25
NPAS3-212ENST00000552696 IRF6O14896 467 aa7.23□□□□□ -1.25
NPAS3-212ENST00000552696 TPRNQ4KMQ1 711 aa7.23□□□□□ -1.25
NPAS3-212ENST00000552696 METTL3Q86U44 580 aaKnown RBP7.23□□□□□ -1.25
NPAS3-212ENST00000552696 KRI1Q8N9T8 703 aaKnown RBP7.23□□□□□ -1.25
NPAS3-212ENST00000552696 MINK1Q8N4C8 1332 aaPredicted RBP7.23□□□□□ -1.25
NPAS3-212ENST00000552696 OATP04181 439 aa7.22□□□□□ -1.25
NPAS3-212ENST00000552696 PXYLP1Q8TE99 480 aa7.22□□□□□ -1.25
NPAS3-212ENST00000552696 ZFRQ96KR1 1074 aaKnown RBP7.22□□□□□ -1.25
NPAS3-212ENST00000552696 RNF166Q96A37 237 aaPredicted RBP7.21□□□□□ -1.26
NPAS3-212ENST00000552696 KCTD12Q96CX2 325 aaKnown RBP7.21□□□□□ -1.26
NPAS3-212ENST00000552696 PHOX2BQ99453 314 aa7.21□□□□□ -1.26
NPAS3-212ENST00000552696 RCCD1A6NED2 376 aa7.2□□□□□ -1.26
NPAS3-212ENST00000552696 DNAJB2P25686 324 aa7.2□□□□□ -1.26
NPAS3-212ENST00000552696 ANKK1Q8NFD2 765 aa7.2□□□□□ -1.26
NPAS3-212ENST00000552696 NLRP7Q8WX94 980 aa7.2□□□□□ -1.26
NPAS3-212ENST00000552696 WNT2BQ93097 391 aa7.2□□□□□ -1.26
NPAS3-212ENST00000552696 SLC24A3Q9HC58 644 aa7.2□□□□□ -1.26
NPAS3-212ENST00000552696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.19□□□□□ -1.26
NPAS3-212ENST00000552696 SAMD7Q7Z3H4 446 aa7.19□□□□□ -1.26
NPAS3-212ENST00000552696 BCAMP50895 628 aa7.18□□□□□ -1.26
NPAS3-212ENST00000552696 SWT1Q5T5J6 900 aaKnown RBP7.18□□□□□ -1.26
NPAS3-212ENST00000552696 LRCH3Q96II8 777 aa7.18□□□□□ -1.26
NPAS3-212ENST00000552696 TMEM134Q9H6X4 195 aa7.18□□□□□ -1.26
NPAS3-212ENST00000552696 THSD4Q6ZMP0 1018 aa7.17□□□□□ -1.26
NPAS3-212ENST00000552696 AK7Q96M32 723 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms