RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ZMYM4Q5VZL5 1548 aa14.87□□□□□ -0.03
PRIM1-208ENST00000552590 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
PRIM1-208ENST00000552590 MAGI2Q86UL8 1455 aa14.82□□□□□ -0.04
PRIM1-208ENST00000552590 HECW1Q76N89 1606 aa14.82□□□□□ -0.04
PRIM1-208ENST00000552590 POTEFA5A3E0 1075 aa14.82□□□□□ -0.04
PRIM1-208ENST00000552590 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
PRIM1-208ENST00000552590 NCKAP5LQ9HCH0 1330 aa14.81□□□□□ -0.04
PRIM1-208ENST00000552590 RGS17Q9UGC6 210 aaPredicted RBP14.8□□□□□ -0.04
PRIM1-208ENST00000552590 SUPT5HO00267 1087 aaKnown RBP14.79□□□□□ -0.04
PRIM1-208ENST00000552590 ATP10AO60312 1499 aa14.79□□□□□ -0.04
PRIM1-208ENST00000552590 CAMSAP1Q5T5Y3 1602 aa14.78□□□□□ -0.04
PRIM1-208ENST00000552590 SPDYE4A6NLX3 237 aa14.77□□□□□ -0.04
PRIM1-208ENST00000552590 TOM1O60784 492 aa14.77□□□□□ -0.04
PRIM1-208ENST00000552590 C3P01024 1663 aa14.77□□□□□ -0.04
PRIM1-208ENST00000552590 C9orf84Q5VXU9 1444 aa14.76□□□□□ -0.05
PRIM1-208ENST00000552590 TRAPPC8Q9Y2L5 1435 aa14.75□□□□□ -0.05
PRIM1-208ENST00000552590 TSPYL2Q9H2G4 693 aaPredicted RBP14.75□□□□□ -0.05
PRIM1-208ENST00000552590 CFAP74Q9C0B2 1584 aa14.74□□□□□ -0.05
PRIM1-208ENST00000552590 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
PRIM1-208ENST00000552590 BMP2KQ9NSY1 1161 aaPredicted RBP14.74□□□□□ -0.05
PRIM1-208ENST00000552590 CTTNBP2Q8WZ74 1663 aa14.73□□□□□ -0.05
PRIM1-208ENST00000552590 FAM9AQ8IZU1 332 aaPredicted RBP14.72□□□□□ -0.05
PRIM1-208ENST00000552590 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
PRIM1-208ENST00000552590 KIF12Q96FN5 646 aa14.7□□□□□ -0.06
PRIM1-208ENST00000552590 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
PRIM1-208ENST00000552590 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
PRIM1-208ENST00000552590 POTEAQ6S8J7 498 aa14.68□□□□□ -0.06
PRIM1-208ENST00000552590 ESF1Q9H501 851 aaKnown RBP14.67□□□□□ -0.06
PRIM1-208ENST00000552590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRIM1-208ENST00000552590 PKD2Q13563 968 aa14.66□□□□□ -0.06
PRIM1-208ENST00000552590 TRPC6Q9Y210 931 aa14.65□□□□□ -0.06
PRIM1-208ENST00000552590 TIE1P35590 1138 aa14.64□□□□□ -0.07
PRIM1-208ENST00000552590 RAPGEF6Q8TEU7 1601 aa14.64□□□□□ -0.07
PRIM1-208ENST00000552590 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
PRIM1-208ENST00000552590 COLQQ9Y215 455 aaPredicted RBP14.63□□□□□ -0.07
PRIM1-208ENST00000552590 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
PRIM1-208ENST00000552590 ALKQ9UM73 1620 aa14.63□□□□□ -0.07
PRIM1-208ENST00000552590 SEC24BO95487 1268 aa14.63□□□□□ -0.07
PRIM1-208ENST00000552590 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
PRIM1-208ENST00000552590 TCOF1Q13428 1488 aaKnown RBP14.62□□□□□ -0.07
PRIM1-208ENST00000552590 NUP153P49790 1475 aaKnown RBP14.6□□□□□ -0.07
PRIM1-208ENST00000552590 PLA2R1Q13018 1463 aa14.6□□□□□ -0.07
PRIM1-208ENST00000552590 MYT1LQ9UL68 1186 aa14.6□□□□□ -0.07
PRIM1-208ENST00000552590 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
PRIM1-208ENST00000552590 CPS1P31327 1500 aa14.59□□□□□ -0.07
PRIM1-208ENST00000552590 ST18O60284 1047 aa14.58□□□□□ -0.08
PRIM1-208ENST00000552590 MMRN1Q13201 1228 aa14.58□□□□□ -0.08
PRIM1-208ENST00000552590 NPATQ14207 1427 aa14.58□□□□□ -0.08
PRIM1-208ENST00000552590 AFAP1Q8N556 730 aa14.57□□□□□ -0.08
PRIM1-208ENST00000552590 SUPT6HQ7KZ85 1726 aaKnown RBP14.57□□□□□ -0.08
PRIM1-208ENST00000552590 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
PRIM1-208ENST00000552590 DIP2CQ9Y2E4 1556 aa14.56□□□□□ -0.08
PRIM1-208ENST00000552590 MAP3K13O43283 966 aa14.56□□□□□ -0.08
PRIM1-208ENST00000552590 PLCH2O75038 1416 aa14.55□□□□□ -0.08
PRIM1-208ENST00000552590 AGLP35573 1532 aa14.55□□□□□ -0.08
PRIM1-208ENST00000552590 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
PRIM1-208ENST00000552590 UPF1Q92900 1129 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRIM1-208ENST00000552590 TTLL13PA6NNM8 815 aa14.53□□□□□ -0.08
PRIM1-208ENST00000552590 REREQ9P2R6 1566 aa14.53□□□□□ -0.08
PRIM1-208ENST00000552590 ZNF518AQ6AHZ1 1483 aa14.53□□□□□ -0.08
PRIM1-208ENST00000552590 SPNS2Q8IVW8 549 aa14.52□□□□□ -0.08
PRIM1-208ENST00000552590 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.08
PRIM1-208ENST00000552590 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.08
PRIM1-208ENST00000552590 CEP170BQ9Y4F5 1589 aaPredicted RBP14.52□□□□□ -0.09
PRIM1-208ENST00000552590 ZMYM3Q14202 1370 aa14.52□□□□□ -0.09
PRIM1-208ENST00000552590 MYO3AQ8NEV4 1616 aa14.51□□□□□ -0.09
PRIM1-208ENST00000552590 EFCAB2Q5VUJ9 269 aa14.51□□□□□ -0.09
PRIM1-208ENST00000552590 ABCA6Q8N139 1617 aa14.51□□□□□ -0.09
PRIM1-208ENST00000552590 KDM5CP41229 1560 aa14.5□□□□□ -0.09
PRIM1-208ENST00000552590 IER5LQ5T953 404 aa14.5□□□□□ -0.09
PRIM1-208ENST00000552590 MROH2AA6NES4 1674 aa14.48□□□□□ -0.09
PRIM1-208ENST00000552590 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
PRIM1-208ENST00000552590 VWDEQ8N2E2 1590 aa14.45□□□□□ -0.1
PRIM1-208ENST00000552590 NEURL4Q96JN8 1562 aa14.45□□□□□ -0.1
PRIM1-208ENST00000552590 TRIM35Q9UPQ4 493 aa14.44□□□□□ -0.1
PRIM1-208ENST00000552590 MLH3Q9UHC1 1453 aa14.43□□□□□ -0.1
PRIM1-208ENST00000552590 POLR1AO95602 1720 aaPredicted RBP14.43□□□□□ -0.1
PRIM1-208ENST00000552590 MYO5CQ9NQX4 1742 aa14.42□□□□□ -0.1
PRIM1-208ENST00000552590 DNMT1P26358 1616 aaKnown RBP14.41□□□□□ -0.1
PRIM1-208ENST00000552590 PRXQ9BXM0 1461 aa14.4□□□□□ -0.1
PRIM1-208ENST00000552590 CLTCQ00610 1675 aaKnown RBP14.4□□□□□ -0.1
PRIM1-208ENST00000552590 LRRC7Q96NW7 1537 aa14.4□□□□□ -0.1
PRIM1-208ENST00000552590 RANGAP1P46060 587 aaPredicted RBP14.39□□□□□ -0.11
PRIM1-208ENST00000552590 RNF17Q9BXT8 1623 aaKnown RBP14.39□□□□□ -0.11
PRIM1-208ENST00000552590 A2ML1A8K2U0 1454 aa14.39□□□□□ -0.11
PRIM1-208ENST00000552590 CDK13Q14004 1512 aaKnown RBP14.39□□□□□ -0.11
PRIM1-208ENST00000552590 TMEM121BQ9BXQ6 578 aaPredicted RBP14.38□□□□□ -0.11
PRIM1-208ENST00000552590 TRIM52Q96A61 297 aa14.38□□□□□ -0.11
PRIM1-208ENST00000552590 ARHGAP5Q13017 1502 aa14.37□□□□□ -0.11
PRIM1-208ENST00000552590 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
PRIM1-208ENST00000552590 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
PRIM1-208ENST00000552590 KIDINS220Q9ULH0 1771 aa14.35□□□□□ -0.11
PRIM1-208ENST00000552590 ANKLE2Q86XL3 938 aa14.35□□□□□ -0.11
PRIM1-208ENST00000552590 SGIP1Q9BQI5 828 aa14.33□□□□□ -0.12
PRIM1-208ENST00000552590 NPHP4O75161 1426 aaPredicted RBP14.32□□□□□ -0.12
PRIM1-208ENST00000552590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRIM1-208ENST00000552590 KIF14Q15058 1648 aa14.31□□□□□ -0.12
PRIM1-208ENST00000552590 GGT6Q6P531 493 aa14.3□□□□□ -0.12
PRIM1-208ENST00000552590 SYNMO15061 1565 aa14.29□□□□□ -0.12
PRIM1-208ENST00000552590 PLCG2P16885 1265 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms