RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 PTPREP23469 700 aa5.54□□□□□ -1.52
TGFBR1-210ENST00000552573 ADGRD1Q6QNK2 874 aa5.54□□□□□ -1.52
TGFBR1-210ENST00000552573 OSBPP22059 807 aa5.53□□□□□ -1.52
TGFBR1-210ENST00000552573 EN1Q05925 392 aaPredicted RBP5.53□□□□□ -1.52
TGFBR1-210ENST00000552573 VSIG10Q8N0Z9 540 aa5.53□□□□□ -1.52
TGFBR1-210ENST00000552573 ZBED2Q9BTP6 218 aa5.53□□□□□ -1.52
TGFBR1-210ENST00000552573 SLC4A5Q9BY07 1137 aa5.53□□□□□ -1.52
TGFBR1-210ENST00000552573 VPS9D1Q9Y2B5 631 aa5.53□□□□□ -1.52
TGFBR1-210ENST00000552573 GRXCR2A6NFK2 248 aa5.52□□□□□ -1.53
TGFBR1-210ENST00000552573 MLLT3P42568 568 aaPredicted RBP5.52□□□□□ -1.53
TGFBR1-210ENST00000552573 NBR1Q14596 966 aa5.52□□□□□ -1.53
TGFBR1-210ENST00000552573 C6orf132Q5T0Z8 1188 aa5.52□□□□□ -1.53
TGFBR1-210ENST00000552573 P3H3Q8IVL6 736 aa5.52□□□□□ -1.53
TGFBR1-210ENST00000552573 RBM33Q96EV2 1170 aaKnown RBP5.52□□□□□ -1.53
TGFBR1-210ENST00000552573 PPP1R3GB7ZBB8 358 aa5.51□□□□□ -1.53
TGFBR1-210ENST00000552573 BHMG1C9JSJ3 638 aaPredicted RBP5.51□□□□□ -1.53
TGFBR1-210ENST00000552573 TSR1Q2NL82 804 aaKnown RBP5.51□□□□□ -1.53
TGFBR1-210ENST00000552573 MYT1LQ9UL68 1186 aa5.5□□□□□ -1.53
TGFBR1-210ENST00000552573 SEMA3EO15041 775 aa5.49□□□□□ -1.53
TGFBR1-210ENST00000552573 PROX2Q3B8N5 592 aa5.49□□□□□ -1.53
TGFBR1-210ENST00000552573 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
TGFBR1-210ENST00000552573 MAP3K7O43318 606 aa5.48□□□□□ -1.53
TGFBR1-210ENST00000552573 RNF166Q96A37 237 aaPredicted RBP5.48□□□□□ -1.53
TGFBR1-210ENST00000552573 CDHR5Q9HBB8 845 aa5.48□□□□□ -1.53
TGFBR1-210ENST00000552573 TESPA1A2RU30 521 aaPredicted RBP5.47□□□□□ -1.53
TGFBR1-210ENST00000552573 NPDC1Q9NQX5 325 aaPredicted RBP5.47□□□□□ -1.53
TGFBR1-210ENST00000552573 FAM198AQ9UFP1 575 aa5.46□□□□□ -1.54
TGFBR1-210ENST00000552573 TRIM6-TRIM34B2RNG4 842 aa5.45□□□□□ -1.54
TGFBR1-210ENST00000552573 ONECUT3O60422 494 aaPredicted RBP5.45□□□□□ -1.54
TGFBR1-210ENST00000552573 RABGEF1Q9UJ41 708 aa5.45□□□□□ -1.54
TGFBR1-210ENST00000552573 TSKSQ9UJT2 592 aa5.45□□□□□ -1.54
TGFBR1-210ENST00000552573 C3orf80F5H4A9 247 aa5.44□□□□□ -1.54
TGFBR1-210ENST00000552573 TTC13Q8NBP0 860 aa5.44□□□□□ -1.54
TGFBR1-210ENST00000552573 KIAA1468Q9P260 1216 aa5.44□□□□□ -1.54
TGFBR1-210ENST00000552573 PRSS12P56730 875 aa5.43□□□□□ -1.54
TGFBR1-210ENST00000552573 CERKQ8TCT0 537 aa5.43□□□□□ -1.54
TGFBR1-210ENST00000552573 CDCA7LQ96GN5 454 aa5.43□□□□□ -1.54
TGFBR1-210ENST00000552573 NBPF3Q9H094 633 aa5.42□□□□□ -1.54
TGFBR1-210ENST00000552573 PTGDRQ13258 359 aa5.41□□□□□ -1.54
TGFBR1-210ENST00000552573 RBM26Q5T8P6 1007 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-210ENST00000552573 MRPL50Q8N5N7 158 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-210ENST00000552573 KCTD12Q96CX2 325 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-210ENST00000552573 RBM27Q9P2N5 1060 aaKnown RBP5.41□□□□□ -1.54
TGFBR1-210ENST00000552573 SEPT9Q9UHD8 586 aaPredicted RBP5.41□□□□□ -1.54
TGFBR1-210ENST00000552573 GPR37O15354 613 aa5.4□□□□□ -1.54
TGFBR1-210ENST00000552573 PADI6Q6TGC4 694 aa5.4□□□□□ -1.54
TGFBR1-210ENST00000552573 LAPTM4BQ86VI4 370 aa5.4□□□□□ -1.54
TGFBR1-210ENST00000552573 THSD4Q6ZMP0 1018 aa5.39□□□□□ -1.55
TGFBR1-210ENST00000552573 STAC3Q96MF2 364 aa5.39□□□□□ -1.55
TGFBR1-210ENST00000552573 NUTM2FA1L443 756 aa5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 SMAPO00193 183 aa5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 FAM98CQ17RN3 349 aaKnown RBP5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 PACS2Q86VP3 889 aa5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 TATDN2Q93075 761 aa5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 WNT2BQ93097 391 aa5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 ZFRQ96KR1 1074 aaKnown RBP5.38□□□□□ -1.55
TGFBR1-210ENST00000552573 SMYD5Q6GMV2 418 aa5.37□□□□□ -1.55
TGFBR1-210ENST00000552573 HCSTQ9UBK5 93 aa5.37□□□□□ -1.55
TGFBR1-210ENST00000552573 FCHSD2O94868 740 aa5.36□□□□□ -1.55
TGFBR1-210ENST00000552573 NUDT18Q6ZVK8 323 aa5.36□□□□□ -1.55
TGFBR1-210ENST00000552573 EYA1Q99502 592 aa5.36□□□□□ -1.55
TGFBR1-210ENST00000552573 PNMA3Q9UL41 463 aa5.36□□□□□ -1.55
TGFBR1-210ENST00000552573 SOWAHBA6NEL2 793 aa5.35□□□□□ -1.55
TGFBR1-210ENST00000552573 GOLGA8CPA6NN73 597 aa5.35□□□□□ -1.55
TGFBR1-210ENST00000552573 NBPF26B4DH59 902 aa5.35□□□□□ -1.55
TGFBR1-210ENST00000552573 BCAMP50895 628 aa5.35□□□□□ -1.55
TGFBR1-210ENST00000552573 ANKK1Q8NFD2 765 aa5.35□□□□□ -1.55
TGFBR1-210ENST00000552573 ADGRG1Q9Y653 693 aa5.35□□□□□ -1.55
TGFBR1-210ENST00000552573 FECHP22830 423 aa5.34□□□□□ -1.55
TGFBR1-210ENST00000552573 PTPN5P54829 565 aa5.34□□□□□ -1.55
TGFBR1-210ENST00000552573 FAM161AQ3B820 660 aa5.34□□□□□ -1.55
TGFBR1-210ENST00000552573 HIC1Q14526 733 aa5.33□□□□□ -1.56
TGFBR1-210ENST00000552573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.33□□□□□ -1.564e-6■□□□□ 9.1
TGFBR1-210ENST00000552573 SAMD7Q7Z3H4 446 aa5.33□□□□□ -1.56
TGFBR1-210ENST00000552573 GNPATO15228 680 aa5.32□□□□□ -1.56
TGFBR1-210ENST00000552573 LRCH3Q96II8 777 aa5.32□□□□□ -1.56
TGFBR1-210ENST00000552573 WBP1LQ9NX94 342 aa5.32□□□□□ -1.56
TGFBR1-210ENST00000552573 GPIHBP1Q8IV16 184 aa5.31□□□□□ -1.56
TGFBR1-210ENST00000552573 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.31□□□□□ -1.56
TGFBR1-210ENST00000552573 SLC24A1O60721 1099 aa5.3□□□□□ -1.56
TGFBR1-210ENST00000552573 SWT1Q5T5J6 900 aaKnown RBP5.3□□□□□ -1.56
TGFBR1-210ENST00000552573 PXYLP1Q8TE99 480 aa5.3□□□□□ -1.56
TGFBR1-210ENST00000552573 TSR3Q9UJK0 312 aaKnown RBP5.3□□□□□ -1.56
TGFBR1-210ENST00000552573 HPS5Q9UPZ3 1129 aa5.3□□□□□ -1.56
TGFBR1-210ENST00000552573 RCCD1A6NED2 376 aa5.29□□□□□ -1.56
TGFBR1-210ENST00000552573 TMEM134Q9H6X4 195 aa5.29□□□□□ -1.56
TGFBR1-210ENST00000552573 DNAJB2P25686 324 aa5.28□□□□□ -1.56
TGFBR1-210ENST00000552573 LMOD2Q6P5Q4 547 aa5.28□□□□□ -1.56
TGFBR1-210ENST00000552573 METTL3Q86U44 580 aaKnown RBP5.28□□□□□ -1.56
TGFBR1-210ENST00000552573 RBM46Q8TBY0 533 aaKnown RBP5.28□□□□□ -1.56
TGFBR1-210ENST00000552573 PHOX2BQ99453 314 aa5.28□□□□□ -1.56
TGFBR1-210ENST00000552573 PLA2G2EQ9NZK7 142 aa5.28□□□□□ -1.56
TGFBR1-210ENST00000552573 OATP04181 439 aa5.27□□□□□ -1.57
TGFBR1-210ENST00000552573 NYAP1Q6ZVC0 841 aa5.27□□□□□ -1.57
TGFBR1-210ENST00000552573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.26□□□□□ -1.57
TGFBR1-210ENST00000552573 TULP1O00294 542 aaPredicted RBP5.26□□□□□ -1.57
TGFBR1-210ENST00000552573 ITGBL1O95965 494 aaPredicted RBP5.26□□□□□ -1.57
TGFBR1-210ENST00000552573 PPP4CP60510 307 aa5.26□□□□□ -1.57
TGFBR1-210ENST00000552573 IFFO2Q5TF58 517 aa5.26□□□□□ -1.57
TGFBR1-210ENST00000552573 APLP1P51693 650 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms