RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	NCKAP5L	Q9HCH0	1330 aa		11.44	□□□□□ -0.58
CNOT2-238	ENST00000552422	VARS2	Q5ST30	1063 aa	Known RBP	11.44	□□□□□ -0.58
CNOT2-238	ENST00000552422	SPRYD3	Q8NCJ5	442 aa		11.44	□□□□□ -0.58
CNOT2-238	ENST00000552422	NUDT7	P0C024	238 aa		11.43	□□□□□ -0.58
CNOT2-238	ENST00000552422	PPP1R15B	Q5SWA1	713 aa		11.43	□□□□□ -0.58
CNOT2-238	ENST00000552422	GRIN2B	Q13224	1484 aa		11.43	□□□□□ -0.58
CNOT2-238	ENST00000552422	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.43	□□□□□ -0.58
CNOT2-238	ENST00000552422	LARP6	Q9BRS8	491 aa	Known RBP	11.42	□□□□□ -0.58
CNOT2-238	ENST00000552422	SNAPC4	Q5SXM2	1469 aa		11.41	□□□□□ -0.58
CNOT2-238	ENST00000552422	CFAP44	Q96MT7	982 aa		11.4	□□□□□ -0.58
CNOT2-238	ENST00000552422	ERICH3	Q5RHP9	1530 aa		11.4	□□□□□ -0.59
CNOT2-238	ENST00000552422	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-238	ENST00000552422	ADAMTS12	P58397	1594 aa		11.39	□□□□□ -0.59
CNOT2-238	ENST00000552422	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.39	□□□□□ -0.59
CNOT2-238	ENST00000552422	CADPS2	Q86UW7	1296 aa		11.39	□□□□□ -0.59
CNOT2-238	ENST00000552422	PTCD2	Q8WV60	388 aa	Known RBP	11.39	□□□□□ -0.59
CNOT2-238	ENST00000552422	DDX27	Q96GQ7	796 aa	Known RBP	11.39	□□□□□ -0.59
CNOT2-238	ENST00000552422	TBC1D12	O60347	775 aa		11.38	□□□□□ -0.59
CNOT2-238	ENST00000552422	SYNJ2	O15056	1496 aa		11.37	□□□□□ -0.59
CNOT2-238	ENST00000552422	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CNOT2-238	ENST00000552422	LHX6	Q9UPM6	363 aa		11.35	□□□□□ -0.59
CNOT2-238	ENST00000552422	CUL7	Q14999	1698 aa		11.35	□□□□□ -0.59
CNOT2-238	ENST00000552422	MFSD10	Q14728	455 aa		11.34	□□□□□ -0.59
CNOT2-238	ENST00000552422	ZNF687	Q8N1G0	1237 aa		11.34	□□□□□ -0.59
CNOT2-238	ENST00000552422	KRTAP3-3	Q9BYR6	98 aa		11.34	□□□□□ -0.59
CNOT2-238	ENST00000552422	KRTAP3-2	Q9BYR7	98 aa		11.34	□□□□□ -0.59
CNOT2-238	ENST00000552422	KIF27	Q86VH2	1401 aa		11.33	□□□□□ -0.6
CNOT2-238	ENST00000552422	OXER1	Q8TDS5	423 aa		11.32	□□□□□ -0.6
CNOT2-238	ENST00000552422	CLASP1	Q7Z460	1538 aa		11.31	□□□□□ -0.6
CNOT2-238	ENST00000552422	GRIN2A	Q12879	1464 aa		11.31	□□□□□ -0.6
CNOT2-238	ENST00000552422	FHAD1	B1AJZ9	1412 aa		11.3	□□□□□ -0.6
CNOT2-238	ENST00000552422	KDM4F	A0A1W2PPD8	638 aa		11.28	□□□□□ -0.6
CNOT2-238	ENST00000552422	CEP170	Q5SW79	1584 aa		11.28	□□□□□ -0.6
CNOT2-238	ENST00000552422	PSD	A5PKW4	1024 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-238	ENST00000552422	SPNS2	Q8IVW8	549 aa		11.27	□□□□□ -0.61
CNOT2-238	ENST00000552422	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.27	□□□□□ -0.61
CNOT2-238	ENST00000552422	RIMBP3C	A6NJZ7	1639 aa		11.26	□□□□□ -0.61
CNOT2-238	ENST00000552422	RIMBP3B	A6NNM3	1639 aa		11.26	□□□□□ -0.61
CNOT2-238	ENST00000552422	RIMBP3	Q9UFD9	1639 aa		11.26	□□□□□ -0.61
CNOT2-238	ENST00000552422	IGF1R	P08069	1367 aa		11.26	□□□□□ -0.61
CNOT2-238	ENST00000552422	NUP160	Q12769	1436 aa		11.25	□□□□□ -0.61
CNOT2-238	ENST00000552422	RUSC2	Q8N2Y8	1516 aa		11.25	□□□□□ -0.61
CNOT2-238	ENST00000552422	MAP3K9	P80192	1104 aa		11.24	□□□□□ -0.61
CNOT2-238	ENST00000552422	SHROOM2	Q13796	1616 aa		11.24	□□□□□ -0.61
CNOT2-238	ENST00000552422	ARHGEF11	O15085	1522 aa		11.23	□□□□□ -0.61
CNOT2-238	ENST00000552422	EMILIN3	Q9NT22	766 aa		11.22	□□□□□ -0.61
CNOT2-238	ENST00000552422	PBX2	P40425	430 aa		11.21	□□□□□ -0.61
CNOT2-238	ENST00000552422	PPP4R3B	Q5MIZ7	849 aa		11.21	□□□□□ -0.61
CNOT2-238	ENST00000552422	EVI5	O60447	810 aa		11.2	□□□□□ -0.62
CNOT2-238	ENST00000552422	CTTNBP2	Q8WZ74	1663 aa		11.2	□□□□□ -0.62
CNOT2-238	ENST00000552422	MMRN1	Q13201	1228 aa		11.19	□□□□□ -0.62
CNOT2-238	ENST00000552422	ANKRD13D	Q6ZTN6	518 aa		11.19	□□□□□ -0.62
CNOT2-238	ENST00000552422	AXIN2	Q9Y2T1	843 aa		11.19	□□□□□ -0.62
CNOT2-238	ENST00000552422	CARMIL1	Q5VZK9	1371 aa		11.18	□□□□□ -0.62
CNOT2-238	ENST00000552422	CAMK2B	Q13554	666 aa		11.17	□□□□□ -0.62
CNOT2-238	ENST00000552422	ZNF454	Q8N9F8	522 aa		11.17	□□□□□ -0.62
CNOT2-238	ENST00000552422	WDR70	Q9NW82	654 aa		11.17	□□□□□ -0.62
CNOT2-238	ENST00000552422	LSM11	P83369	360 aa	Known RBP eCLIP	11.16	□□□□□ -0.62	4e-9	■□□□□ 9.5
CNOT2-238	ENST00000552422	POTEE	Q6S8J3	1075 aa		11.16	□□□□□ -0.62
CNOT2-238	ENST00000552422	RAPGEF2	Q9Y4G8	1499 aa		11.16	□□□□□ -0.62
CNOT2-238	ENST00000552422	EEA1	Q15075	1411 aa		11.16	□□□□□ -0.62
CNOT2-238	ENST00000552422	PRX	Q9BXM0	1461 aa		11.15	□□□□□ -0.62
CNOT2-238	ENST00000552422	ARHGAP33	O14559	1287 aa		11.15	□□□□□ -0.62
CNOT2-238	ENST00000552422	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.15	□□□□□ -0.62
CNOT2-238	ENST00000552422	DPYSL4	O14531	572 aa		11.14	□□□□□ -0.63
CNOT2-238	ENST00000552422	KIAA0586	Q9BVV6	1533 aa		11.14	□□□□□ -0.63
CNOT2-238	ENST00000552422	ARAP1	Q96P48	1450 aa		11.13	□□□□□ -0.63
CNOT2-238	ENST00000552422	IQGAP2	Q13576	1575 aa		11.13	□□□□□ -0.63
CNOT2-238	ENST00000552422	ERCC6L2	Q5T890	1561 aa		11.13	□□□□□ -0.63
CNOT2-238	ENST00000552422	FOSB	P53539	338 aa		11.12	□□□□□ -0.63
CNOT2-238	ENST00000552422	KCNH8	Q96L42	1107 aa		11.12	□□□□□ -0.63
CNOT2-238	ENST00000552422	TSHZ2	Q9NRE2	1034 aa		11.12	□□□□□ -0.63
CNOT2-238	ENST00000552422	KIF21B	O75037	1637 aa		11.11	□□□□□ -0.63
CNOT2-238	ENST00000552422	PSEN2	P49810	448 aa		11.11	□□□□□ -0.63
CNOT2-238	ENST00000552422	JPH4	Q96JJ6	628 aa		11.11	□□□□□ -0.63
CNOT2-238	ENST00000552422	E2F4	Q16254	413 aa		11.1	□□□□□ -0.63
CNOT2-238	ENST00000552422	KCNK17	Q96T54	332 aa		11.1	□□□□□ -0.63
CNOT2-238	ENST00000552422	PTGER2	P43116	358 aa		11.08	□□□□□ -0.64
CNOT2-238	ENST00000552422	ZDHHC16	Q969W1	377 aa		11.08	□□□□□ -0.64
CNOT2-238	ENST00000552422	DMRTA1	Q5VZB9	504 aa		11.07	□□□□□ -0.64
CNOT2-238	ENST00000552422	BCL2L12	Q9HB09	334 aa		11.07	□□□□□ -0.64
CNOT2-238	ENST00000552422	MYT1L	Q9UL68	1186 aa		11.07	□□□□□ -0.64
CNOT2-238	ENST00000552422	PRG4	Q92954	1404 aa	Predicted RBP	11.07	□□□□□ -0.64
CNOT2-238	ENST00000552422	UGGT2	Q9NYU1	1516 aa		11.06	□□□□□ -0.64
CNOT2-238	ENST00000552422	ADGRD1	Q6QNK2	874 aa		11.05	□□□□□ -0.64
CNOT2-238	ENST00000552422	RNF166	Q96A37	237 aa	Predicted RBP	11.05	□□□□□ -0.64
CNOT2-238	ENST00000552422	PTPRE	P23469	700 aa		11.04	□□□□□ -0.64
CNOT2-238	ENST00000552422	PLCB2	Q00722	1185 aa		11.04	□□□□□ -0.64
CNOT2-238	ENST00000552422	ADAM33	Q9BZ11	813 aa		11.04	□□□□□ -0.64
CNOT2-238	ENST00000552422	PCDHGA10	Q9Y5H3	936 aa		11.04	□□□□□ -0.64
CNOT2-238	ENST00000552422	KIAA0556	O60303	1618 aa		11.03	□□□□□ -0.64
CNOT2-238	ENST00000552422	PHF14	O94880	888 aa		11.03	□□□□□ -0.64
CNOT2-238	ENST00000552422	TK2	O00142	265 aa		11.02	□□□□□ -0.65
CNOT2-238	ENST00000552422	TYW1B	Q6NUM6	668 aa		11.02	□□□□□ -0.65
CNOT2-238	ENST00000552422	DISP1	Q96F81	1524 aa		11.02	□□□□□ -0.65
CNOT2-238	ENST00000552422	CYB5RL	Q6IPT4	315 aa		11.01	□□□□□ -0.65
CNOT2-238	ENST00000552422	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.01	□□□□□ -0.65
CNOT2-238	ENST00000552422	DDX12P	Q92771	950 aa		11.01	□□□□□ -0.65
CNOT2-238	ENST00000552422	FBXW7	Q969H0	707 aa		11.01	□□□□□ -0.65
CNOT2-238	ENST00000552422	SPDYE16	A6NNV3	312 aa	Predicted RBP	11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms