RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.78
PPFIA2-226ENST00000552020 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
PPFIA2-226ENST00000552020 PDIA4P13667 645 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-226ENST00000552020 FECHP22830 423 aa10.15□□□□□ -0.78
PPFIA2-226ENST00000552020 NPM2Q86SE8 214 aaKnown RBP10.15□□□□□ -0.78
PPFIA2-226ENST00000552020 TMEM121BQ9BXQ6 578 aaPredicted RBP10.15□□□□□ -0.78
PPFIA2-226ENST00000552020 G3V3G9 751 aa10.14□□□□□ -0.79
PPFIA2-226ENST00000552020 CLUAP1Q96AJ1 413 aa10.14□□□□□ -0.79
PPFIA2-226ENST00000552020 OSBPP22059 807 aa10.13□□□□□ -0.79
PPFIA2-226ENST00000552020 ILDR1Q86SU0 546 aaPredicted RBP10.13□□□□□ -0.79
PPFIA2-226ENST00000552020 CCDC82Q8N4S0 544 aa10.13□□□□□ -0.79
PPFIA2-226ENST00000552020 DDX12PQ92771 950 aa10.13□□□□□ -0.79
PPFIA2-226ENST00000552020 GOPCQ9HD26 462 aa10.12□□□□□ -0.79
PPFIA2-226ENST00000552020 ZBTB7CA1YPR0 619 aa10.11□□□□□ -0.79
PPFIA2-226ENST00000552020 C2orf72A6NCS6 295 aa10.11□□□□□ -0.79
PPFIA2-226ENST00000552020 GIGYF2Q6Y7W6 1299 aaKnown RBP10.11□□□□□ -0.79
PPFIA2-226ENST00000552020 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
PPFIA2-226ENST00000552020 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
PPFIA2-226ENST00000552020 TRAK2O60296 914 aa10.1□□□□□ -0.79
PPFIA2-226ENST00000552020 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
PPFIA2-226ENST00000552020 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
PPFIA2-226ENST00000552020 A6NJR5 290 aa10.09□□□□□ -0.79
PPFIA2-226ENST00000552020 MS4A1P11836 297 aa10.09□□□□□ -0.79
PPFIA2-226ENST00000552020 MCM6Q14566 821 aa10.05□□□□□ -0.8
PPFIA2-226ENST00000552020 EMP3P54852 163 aa10.04□□□□□ -0.8
PPFIA2-226ENST00000552020 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
PPFIA2-226ENST00000552020 PTGDRQ13258 359 aa10.03□□□□□ -0.8
PPFIA2-226ENST00000552020 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
PPFIA2-226ENST00000552020 TBC1D12O60347 775 aa10.02□□□□□ -0.81
PPFIA2-226ENST00000552020 PTGER2P43116 358 aa10.02□□□□□ -0.81
PPFIA2-226ENST00000552020 SH3D19Q5HYK7 790 aa10.02□□□□□ -0.81
PPFIA2-226ENST00000552020 REPIN1Q9BWE0 567 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-226ENST00000552020 KIF3CO14782 793 aa10.01□□□□□ -0.81
PPFIA2-226ENST00000552020 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-226ENST00000552020 PROSER2Q86WR7 435 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-226ENST00000552020 ZNF777Q9ULD5 760 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-226ENST00000552020 RAD21O60216 631 aa10□□□□□ -0.81
PPFIA2-226ENST00000552020 EVI5O60447 810 aa10□□□□□ -0.81
PPFIA2-226ENST00000552020 OXER1Q8TDS5 423 aa10□□□□□ -0.81
PPFIA2-226ENST00000552020 CCDC97Q96F63 343 aaPredicted RBP10□□□□□ -0.81
PPFIA2-226ENST00000552020 CLCN1P35523 988 aa9.99□□□□□ -0.81
PPFIA2-226ENST00000552020 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
PPFIA2-226ENST00000552020 FAM205CA6NFA0 338 aa9.97□□□□□ -0.81
PPFIA2-226ENST00000552020 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
PPFIA2-226ENST00000552020 GPCPD1Q9NPB8 672 aa9.97□□□□□ -0.81
PPFIA2-226ENST00000552020 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
PPFIA2-226ENST00000552020 SPNS2Q8IVW8 549 aa9.96□□□□□ -0.82
PPFIA2-226ENST00000552020 POM121Q96HA1 1249 aa9.96□□□□□ -0.82
PPFIA2-226ENST00000552020 ZNF710Q8N1W2 664 aa9.95□□□□□ -0.82
PPFIA2-226ENST00000552020 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
PPFIA2-226ENST00000552020 RB1CC1Q8TDY2 1594 aa9.94□□□□□ -0.82
PPFIA2-226ENST00000552020 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
PPFIA2-226ENST00000552020 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
PPFIA2-226ENST00000552020 MAP3K7O43318 606 aa9.93□□□□□ -0.82
PPFIA2-226ENST00000552020 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
PPFIA2-226ENST00000552020 HS3ST6Q96QI5 342 aa9.93□□□□□ -0.82
PPFIA2-226ENST00000552020 BEGAINQ9BUH8 593 aa9.93□□□□□ -0.82
PPFIA2-226ENST00000552020 POLR3EQ9NVU0 708 aa9.93□□□□□ -0.82
PPFIA2-226ENST00000552020 SERPINA10Q9UK55 444 aa9.93□□□□□ -0.82
PPFIA2-226ENST00000552020 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
PPFIA2-226ENST00000552020 DOK7Q18PE1 504 aa9.91□□□□□ -0.82
PPFIA2-226ENST00000552020 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
PPFIA2-226ENST00000552020 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
PPFIA2-226ENST00000552020 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
PPFIA2-226ENST00000552020 PHOX2BQ99453 314 aa9.89□□□□□ -0.83
PPFIA2-226ENST00000552020 RIMBP2O15034 1052 aa9.88□□□□□ -0.83
PPFIA2-226ENST00000552020 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
PPFIA2-226ENST00000552020 AEBP1Q8IUX7 1158 aa9.88□□□□□ -0.83
PPFIA2-226ENST00000552020 KCTD17Q8N5Z5 321 aa9.88□□□□□ -0.83
PPFIA2-226ENST00000552020 FNBP4Q8N3X1 1017 aaPredicted RBP9.87□□□□□ -0.83
PPFIA2-226ENST00000552020 NLRP7Q8WX94 980 aa9.87□□□□□ -0.83
PPFIA2-226ENST00000552020 NPDC1Q9NQX5 325 aaPredicted RBP9.87□□□□□ -0.83
PPFIA2-226ENST00000552020 POTEB3A0JP26 581 aa9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 POTEBQ6S5H4 581 aa9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 EPAS1Q99814 870 aa9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 TRAIPQ9BWF2 469 aa9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 FAM217BQ9NTX9 383 aaPredicted RBP9.86□□□□□ -0.83
PPFIA2-226ENST00000552020 ERBB3P21860 1342 aa9.85□□□□□ -0.83
PPFIA2-226ENST00000552020 COG6Q9Y2V7 657 aa9.85□□□□□ -0.83
PPFIA2-226ENST00000552020 PHF14O94880 888 aa9.84□□□□□ -0.83
PPFIA2-226ENST00000552020 HOXB1P14653 301 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-226ENST00000552020 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-226ENST00000552020 TSR1Q2NL82 804 aaKnown RBP9.84□□□□□ -0.83
PPFIA2-226ENST00000552020 MYSM1Q5VVJ2 828 aa9.84□□□□□ -0.83
PPFIA2-226ENST00000552020 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
PPFIA2-226ENST00000552020 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
PPFIA2-226ENST00000552020 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
PPFIA2-226ENST00000552020 SNRKQ9NRH2 765 aa9.82□□□□□ -0.84
PPFIA2-226ENST00000552020 RFC5P40937 340 aa9.81□□□□□ -0.84
PPFIA2-226ENST00000552020 METTL3Q86U44 580 aaKnown RBP9.81□□□□□ -0.84
PPFIA2-226ENST00000552020 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
PPFIA2-226ENST00000552020 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
PPFIA2-226ENST00000552020 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.81□□□□□ -0.84
PPFIA2-226ENST00000552020 OATP04181 439 aa9.8□□□□□ -0.84
PPFIA2-226ENST00000552020 TYW1BQ6NUM6 668 aa9.79□□□□□ -0.84
PPFIA2-226ENST00000552020 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
PPFIA2-226ENST00000552020 ANO8Q9HCE9 1232 aaPredicted RBP9.79□□□□□ -0.84
PPFIA2-226ENST00000552020 PADI6Q6TGC4 694 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms