RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 DMRTA1Q5VZB9 504 aa12.27□□□□□ -0.45
GPN3-209ENST00000551079 GRXCR2A6NFK2 248 aa12.26□□□□□ -0.45
GPN3-209ENST00000551079 TK2O00142 265 aa12.25□□□□□ -0.45
GPN3-209ENST00000551079 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
GPN3-209ENST00000551079 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
GPN3-209ENST00000551079 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
GPN3-209ENST00000551079 EN1Q05925 392 aaPredicted RBP12.22□□□□□ -0.45
GPN3-209ENST00000551079 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
GPN3-209ENST00000551079 MAP3K7O43318 606 aa12.21□□□□□ -0.45
GPN3-209ENST00000551079 SLC4A5Q9BY07 1137 aa12.21□□□□□ -0.45
GPN3-209ENST00000551079 OSBPP22059 807 aa12.18□□□□□ -0.46
GPN3-209ENST00000551079 ZBED2Q9BTP6 218 aa12.18□□□□□ -0.46
GPN3-209ENST00000551079 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
GPN3-209ENST00000551079 MYT1LQ9UL68 1186 aa12.17□□□□□ -0.46
GPN3-209ENST00000551079 COL9A1P20849 921 aa12.16□□□□□ -0.46
GPN3-209ENST00000551079 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
GPN3-209ENST00000551079 SEMA3EO15041 775 aa12.15□□□□□ -0.46
GPN3-209ENST00000551079 HRO43593 1189 aa12.15□□□□□ -0.46
GPN3-209ENST00000551079 TSR1Q2NL82 804 aaKnown RBP12.15□□□□□ -0.46
GPN3-209ENST00000551079 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
GPN3-209ENST00000551079 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
GPN3-209ENST00000551079 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
GPN3-209ENST00000551079 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
GPN3-209ENST00000551079 ONECUT3O60422 494 aaPredicted RBP12.09□□□□□ -0.47
GPN3-209ENST00000551079 PROX2Q3B8N5 592 aa12.09□□□□□ -0.47
GPN3-209ENST00000551079 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
GPN3-209ENST00000551079 RABGEF1Q9UJ41 708 aa12.09□□□□□ -0.47
GPN3-209ENST00000551079 TESPA1A2RU30 521 aaPredicted RBP12.08□□□□□ -0.48
GPN3-209ENST00000551079 BHMG1C9JSJ3 638 aaPredicted RBP12.08□□□□□ -0.48
GPN3-209ENST00000551079 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
GPN3-209ENST00000551079 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
GPN3-209ENST00000551079 MRPL50Q8N5N7 158 aaKnown RBP12.05□□□□□ -0.48
GPN3-209ENST00000551079 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
GPN3-209ENST00000551079 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
GPN3-209ENST00000551079 PRSS12P56730 875 aa12.03□□□□□ -0.48
GPN3-209ENST00000551079 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
GPN3-209ENST00000551079 CDCA7LQ96GN5 454 aa12.02□□□□□ -0.49
GPN3-209ENST00000551079 GOLGA8CPA6NN73 597 aa12.01□□□□□ -0.49
GPN3-209ENST00000551079 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
GPN3-209ENST00000551079 NUTM2FA1L443 756 aa12□□□□□ -0.49
GPN3-209ENST00000551079 NPDC1Q9NQX5 325 aaPredicted RBP12□□□□□ -0.49
GPN3-209ENST00000551079 TSKSQ9UJT2 592 aa12□□□□□ -0.49
GPN3-209ENST00000551079 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
GPN3-209ENST00000551079 TULP1O00294 542 aaPredicted RBP11.98□□□□□ -0.49
GPN3-209ENST00000551079 PTGDRQ13258 359 aa11.97□□□□□ -0.49
GPN3-209ENST00000551079 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
GPN3-209ENST00000551079 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
GPN3-209ENST00000551079 WNT2BQ93097 391 aa11.95□□□□□ -0.5
GPN3-209ENST00000551079 NBPF26B4DH59 902 aa11.94□□□□□ -0.5
GPN3-209ENST00000551079 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
GPN3-209ENST00000551079 SEPT9Q9UHD8 586 aaPredicted RBP11.94□□□□□ -0.5
GPN3-209ENST00000551079 FCHSD2O94868 740 aa11.93□□□□□ -0.5
GPN3-209ENST00000551079 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
GPN3-209ENST00000551079 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
GPN3-209ENST00000551079 SLC24A1O60721 1099 aa11.92□□□□□ -0.5
GPN3-209ENST00000551079 TTC13Q8NBP0 860 aa11.92□□□□□ -0.5
GPN3-209ENST00000551079 TATDN2Q93075 761 aa11.92□□□□□ -0.5
GPN3-209ENST00000551079 HCSTQ9UBK5 93 aa11.92□□□□□ -0.5
GPN3-209ENST00000551079 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
GPN3-209ENST00000551079 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
GPN3-209ENST00000551079 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
GPN3-209ENST00000551079 THSD4Q6ZMP0 1018 aa11.89□□□□□ -0.51
GPN3-209ENST00000551079 NUDT18Q6ZVK8 323 aa11.89□□□□□ -0.51
GPN3-209ENST00000551079 SMAPO00193 183 aa11.87□□□□□ -0.51
GPN3-209ENST00000551079 HIC1Q14526 733 aa11.87□□□□□ -0.51
GPN3-209ENST00000551079 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
GPN3-209ENST00000551079 SOWAHBA6NEL2 793 aa11.84□□□□□ -0.51
GPN3-209ENST00000551079 C3orf80F5H4A9 247 aa11.84□□□□□ -0.51
GPN3-209ENST00000551079 PTPN5P54829 565 aa11.84□□□□□ -0.51
GPN3-209ENST00000551079 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
GPN3-209ENST00000551079 GNPATO15228 680 aa11.82□□□□□ -0.52
GPN3-209ENST00000551079 HDGFP51858 240 aaKnown RBP11.82□□□□□ -0.52
GPN3-209ENST00000551079 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
GPN3-209ENST00000551079 GPR37O15354 613 aa11.81□□□□□ -0.52
GPN3-209ENST00000551079 BCAMP50895 628 aa11.81□□□□□ -0.52
GPN3-209ENST00000551079 RBM46Q8TBY0 533 aaKnown RBP11.8□□□□□ -0.52
GPN3-209ENST00000551079 EYA1Q99502 592 aa11.8□□□□□ -0.52
GPN3-209ENST00000551079 ADGRG1Q9Y653 693 aa11.8□□□□□ -0.52
GPN3-209ENST00000551079 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
GPN3-209ENST00000551079 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
GPN3-209ENST00000551079 OATP04181 439 aa11.76□□□□□ -0.53
GPN3-209ENST00000551079 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
GPN3-209ENST00000551079 FECHP22830 423 aa11.75□□□□□ -0.53
GPN3-209ENST00000551079 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
GPN3-209ENST00000551079 NYAP1Q6ZVC0 841 aa11.75□□□□□ -0.53
GPN3-209ENST00000551079 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
GPN3-209ENST00000551079 DNAJB2P25686 324 aa11.74□□□□□ -0.53
GPN3-209ENST00000551079 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
GPN3-209ENST00000551079 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
GPN3-209ENST00000551079 PPP4CP60510 307 aa11.73□□□□□ -0.53
GPN3-209ENST00000551079 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
GPN3-209ENST00000551079 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
GPN3-209ENST00000551079 PXYLP1Q8TE99 480 aa11.71□□□□□ -0.53
GPN3-209ENST00000551079 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
GPN3-209ENST00000551079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.7□□□□□ -0.54
GPN3-209ENST00000551079 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
GPN3-209ENST00000551079 RNF40O75150 1001 aa11.7□□□□□ -0.54
GPN3-209ENST00000551079 METTL3Q86U44 580 aaKnown RBP11.7□□□□□ -0.54
GPN3-209ENST00000551079 SLF2Q8IX21 1173 aa11.7□□□□□ -0.54
GPN3-209ENST00000551079 TMEM134Q9H6X4 195 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms