RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 RGL3Q3MIN7 710 aa21.67■■□□□ 1.06
SCN8A-206ENST00000550891 ZNF518AQ6AHZ1 1483 aa21.66■■□□□ 1.06
SCN8A-206ENST00000550891 CFAP74Q9C0B2 1584 aa21.65■■□□□ 1.06
SCN8A-206ENST00000550891 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
SCN8A-206ENST00000550891 WASHC2AQ641Q2 1341 aa21.64■■□□□ 1.05
SCN8A-206ENST00000550891 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
SCN8A-206ENST00000550891 CARD11Q9BXL7 1154 aa21.62■■□□□ 1.05
SCN8A-206ENST00000550891 DHX29Q7Z478 1369 aaKnown RBP21.62■■□□□ 1.05
SCN8A-206ENST00000550891 UHRF1BP1Q6BDS2 1440 aa21.6■■□□□ 1.05
SCN8A-206ENST00000550891 USP47Q96K76 1375 aa21.6■■□□□ 1.05
SCN8A-206ENST00000550891 SCAF1Q9H7N4 1312 aaKnown RBP21.57■■□□□ 1.04
SCN8A-206ENST00000550891 CCDC7Q96M83 1385 aa21.57■■□□□ 1.04
SCN8A-206ENST00000550891 PLA2R1Q13018 1463 aa21.57■■□□□ 1.04
SCN8A-206ENST00000550891 POGZQ7Z3K3 1410 aa21.57■■□□□ 1.04
SCN8A-206ENST00000550891 RALGAPBQ86X10 1494 aa21.56■■□□□ 1.04
SCN8A-206ENST00000550891 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
SCN8A-206ENST00000550891 CCER2I3L3R5 266 aa21.56■■□□□ 1.04
SCN8A-206ENST00000550891 ROCK2O75116 1388 aaKnown RBP21.55■■□□□ 1.04
SCN8A-206ENST00000550891 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
SCN8A-206ENST00000550891 ATP10AO60312 1499 aa21.54■■□□□ 1.04
SCN8A-206ENST00000550891 NEO1Q92859 1461 aa21.54■■□□□ 1.04
SCN8A-206ENST00000550891 RIMBP3CA6NJZ7 1639 aa21.53■■□□□ 1.04
SCN8A-206ENST00000550891 RIMBP3BA6NNM3 1639 aa21.53■■□□□ 1.04
SCN8A-206ENST00000550891 RIMBP3Q9UFD9 1639 aa21.53■■□□□ 1.04
SCN8A-206ENST00000550891 A2MP01023 1474 aa21.52■■□□□ 1.04
SCN8A-206ENST00000550891 C11orf95C9JLR9 678 aaPredicted RBP21.51■■□□□ 1.03
SCN8A-206ENST00000550891 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
SCN8A-206ENST00000550891 EIF2AK4Q9P2K8 1649 aaKnown RBP21.51■■□□□ 1.03
SCN8A-206ENST00000550891 CNTLNQ9NXG0 1405 aa21.51■■□□□ 1.03
SCN8A-206ENST00000550891 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
SCN8A-206ENST00000550891 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
SCN8A-206ENST00000550891 KIDINS220Q9ULH0 1771 aa21.5■■□□□ 1.03
SCN8A-206ENST00000550891 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
SCN8A-206ENST00000550891 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
SCN8A-206ENST00000550891 DEPDC5O75140 1603 aa21.49■■□□□ 1.03
SCN8A-206ENST00000550891 GGT6Q6P531 493 aa21.49■■□□□ 1.03
SCN8A-206ENST00000550891 PRAG1Q86YV5 1406 aa21.47■■□□□ 1.03
SCN8A-206ENST00000550891 KDM5CP41229 1560 aa21.47■■□□□ 1.03
SCN8A-206ENST00000550891 HECW2Q9P2P5 1572 aa21.47■■□□□ 1.03
SCN8A-206ENST00000550891 TET3O43151 1660 aa21.47■■□□□ 1.03
SCN8A-206ENST00000550891 E9PCH4 1651 aa21.46■■□□□ 1.03
SCN8A-206ENST00000550891 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
SCN8A-206ENST00000550891 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
SCN8A-206ENST00000550891 ARID4BQ4LE39 1312 aaPredicted RBP21.44■■□□□ 1.02
SCN8A-206ENST00000550891 TRPM2O94759 1503 aa21.44■■□□□ 1.02
SCN8A-206ENST00000550891 PTPRTO14522 1441 aa21.42■■□□□ 1.02
SCN8A-206ENST00000550891 STAC3Q96MF2 364 aa21.42■■□□□ 1.02
SCN8A-206ENST00000550891 VWDEQ8N2E2 1590 aa21.41■■□□□ 1.02
SCN8A-206ENST00000550891 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
SCN8A-206ENST00000550891 SPHKAPQ2M3C7 1700 aa21.4■■□□□ 1.02
SCN8A-206ENST00000550891 GLI2P10070 1586 aa21.39■■□□□ 1.02
SCN8A-206ENST00000550891 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.02
SCN8A-206ENST00000550891 MAP3K4Q9Y6R4 1608 aa21.39■■□□□ 1.01
SCN8A-206ENST00000550891 MROH1Q8NDA8 1641 aa21.37■■□□□ 1.01
SCN8A-206ENST00000550891 POLR1AO95602 1720 aaPredicted RBP21.36■■□□□ 1.01
SCN8A-206ENST00000550891 TRPM1Q7Z4N2 1603 aa21.36■■□□□ 1.01
SCN8A-206ENST00000550891 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
SCN8A-206ENST00000550891 CHGAP10645 457 aaKnown RBP21.35■■□□□ 1.01
SCN8A-206ENST00000550891 PRKRIP1Q9H875 184 aaPredicted RBP21.34■■□□□ 1.01
SCN8A-206ENST00000550891 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
SCN8A-206ENST00000550891 ABCA6Q8N139 1617 aa21.34■■□□□ 1.01
SCN8A-206ENST00000550891 CLTCL1P53675 1640 aa21.33■■□□□ 1.01
SCN8A-206ENST00000550891 RNF17Q9BXT8 1623 aaKnown RBP21.33■■□□□ 1.01
SCN8A-206ENST00000550891 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
SCN8A-206ENST00000550891 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
SCN8A-206ENST00000550891 BCORL1Q5H9F3 1711 aa21.32■■□□□ 1
SCN8A-206ENST00000550891 FRMPD1Q5SYB0 1578 aa21.31■■□□□ 1
SCN8A-206ENST00000550891 DIP2BQ9P265 1576 aa21.31■■□□□ 1
SCN8A-206ENST00000550891 CEP152O94986 1710 aa21.31■■□□□ 1
SCN8A-206ENST00000550891 PPRC1Q5VV67 1664 aaKnown RBP21.29■■□□□ 1
SCN8A-206ENST00000550891 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
SCN8A-206ENST00000550891 RICTORQ6R327 1708 aa21.28■■□□□ 1
SCN8A-206ENST00000550891 MRS2Q9HD23 443 aa21.28■■□□□ 1
SCN8A-206ENST00000550891 YEATS2Q9ULM3 1422 aa21.27■■□□□ 1
SCN8A-206ENST00000550891 TMF1P82094 1093 aa21.27■■□□□ 1
SCN8A-206ENST00000550891 NPATQ14207 1427 aa21.26■□□□□ 0.99
SCN8A-206ENST00000550891 TSPOAP1O95153 1857 aa21.25■□□□□ 0.99
SCN8A-206ENST00000550891 UGGT1Q9NYU2 1555 aa21.25■□□□□ 0.99
SCN8A-206ENST00000550891 LAMC1P11047 1609 aa21.25■□□□□ 0.99
SCN8A-206ENST00000550891 ABCC3O15438 1527 aa21.24■□□□□ 0.99
SCN8A-206ENST00000550891 KIF1BO60333 1816 aa21.22■□□□□ 0.99
SCN8A-206ENST00000550891 MADDQ8WXG6 1647 aa21.22■□□□□ 0.99
SCN8A-206ENST00000550891 HNRNPUQ00839 825 aaKnown RBP eCLIP21.22■□□□□ 0.99
SCN8A-206ENST00000550891 NEURL4Q96JN8 1562 aa21.21■□□□□ 0.99
SCN8A-206ENST00000550891 EIF3AQ14152 1382 aaKnown RBP21.21■□□□□ 0.99
SCN8A-206ENST00000550891 FAM9BQ8IZU0 186 aa21.19■□□□□ 0.98
SCN8A-206ENST00000550891 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
SCN8A-206ENST00000550891 CDCA8Q53HL2 280 aa21.18■□□□□ 0.98
SCN8A-206ENST00000550891 TESK2Q96S53 571 aa21.18■□□□□ 0.98
SCN8A-206ENST00000550891 ZMYM4Q5VZL5 1548 aa21.17■□□□□ 0.98
SCN8A-206ENST00000550891 SCAF11Q99590 1463 aaKnown RBP21.17■□□□□ 0.98
SCN8A-206ENST00000550891 ADGRF5Q8IZF2 1346 aa21.17■□□□□ 0.98
SCN8A-206ENST00000550891 MYOM2P54296 1465 aa21.17■□□□□ 0.98
SCN8A-206ENST00000550891 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
SCN8A-206ENST00000550891 CAMSAP1Q5T5Y3 1602 aa21.16■□□□□ 0.98
SCN8A-206ENST00000550891 COL17A1Q9UMD9 1497 aaPredicted RBP21.15■□□□□ 0.98
SCN8A-206ENST00000550891 CCDC184Q52MB2 194 aa21.15■□□□□ 0.98
SCN8A-206ENST00000550891 RPGRIP1LQ68CZ1 1315 aa21.14■□□□□ 0.98
SCN8A-206ENST00000550891 DISP3Q9P2K9 1392 aa21.14■□□□□ 0.97
SCN8A-206ENST00000550891 SLC24A1O60721 1099 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms