RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 PROX2Q3B8N5 592 aa13.52□□□□□ -0.25
AC087888.1-201ENST00000550884 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
AC087888.1-201ENST00000550884 EPAS1Q99814 870 aa13.51□□□□□ -0.25
AC087888.1-201ENST00000550884 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
AC087888.1-201ENST00000550884 HCSTQ9UBK5 93 aa13.5□□□□□ -0.25
AC087888.1-201ENST00000550884 C6orf132Q5T0Z8 1188 aa13.49□□□□□ -0.25
AC087888.1-201ENST00000550884 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
AC087888.1-201ENST00000550884 ARIH1Q9Y4X5 557 aaPredicted RBP13.49□□□□□ -0.25
AC087888.1-201ENST00000550884 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
AC087888.1-201ENST00000550884 SPDYE16A6NNV3 312 aaPredicted RBP13.45□□□□□ -0.26
AC087888.1-201ENST00000550884 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
AC087888.1-201ENST00000550884 NBR1Q14596 966 aa13.44□□□□□ -0.26
AC087888.1-201ENST00000550884 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
AC087888.1-201ENST00000550884 EN1Q05925 392 aaPredicted RBP13.42□□□□□ -0.26
AC087888.1-201ENST00000550884 TSR1Q2NL82 804 aaKnown RBP13.42□□□□□ -0.26
AC087888.1-201ENST00000550884 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
AC087888.1-201ENST00000550884 PTPN5P54829 565 aa13.39□□□□□ -0.27
AC087888.1-201ENST00000550884 THSD4Q6ZMP0 1018 aa13.39□□□□□ -0.27
AC087888.1-201ENST00000550884 NBPF3Q9H094 633 aa13.39□□□□□ -0.27
AC087888.1-201ENST00000550884 KIAA1468Q9P260 1216 aa13.39□□□□□ -0.27
AC087888.1-201ENST00000550884 GRXCR2A6NFK2 248 aa13.38□□□□□ -0.27
AC087888.1-201ENST00000550884 WNT2BQ93097 391 aa13.38□□□□□ -0.27
AC087888.1-201ENST00000550884 MAP3K7O43318 606 aa13.37□□□□□ -0.27
AC087888.1-201ENST00000550884 PLA2G2EQ9NZK7 142 aa13.36□□□□□ -0.27
AC087888.1-201ENST00000550884 GOLGA8CPA6NN73 597 aa13.35□□□□□ -0.27
AC087888.1-201ENST00000550884 TRIM6-TRIM34B2RNG4 842 aa13.34□□□□□ -0.27
AC087888.1-201ENST00000550884 OSBPP22059 807 aa13.34□□□□□ -0.27
AC087888.1-201ENST00000550884 ONECUT3O60422 494 aaPredicted RBP13.33□□□□□ -0.28
AC087888.1-201ENST00000550884 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
AC087888.1-201ENST00000550884 SEPT9Q9UHD8 586 aaPredicted RBP13.32□□□□□ -0.28
AC087888.1-201ENST00000550884 TSKSQ9UJT2 592 aa13.32□□□□□ -0.28
AC087888.1-201ENST00000550884 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
AC087888.1-201ENST00000550884 FAM198AQ9UFP1 575 aa13.29□□□□□ -0.28
AC087888.1-201ENST00000550884 LAPTM4BQ86VI4 370 aa13.28□□□□□ -0.28
AC087888.1-201ENST00000550884 ZFRQ96KR1 1074 aaKnown RBP13.28□□□□□ -0.28
AC087888.1-201ENST00000550884 BCAMP50895 628 aa13.27□□□□□ -0.29
AC087888.1-201ENST00000550884 C3orf80F5H4A9 247 aa13.26□□□□□ -0.29
AC087888.1-201ENST00000550884 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
AC087888.1-201ENST00000550884 CDCA7LQ96GN5 454 aa13.25□□□□□ -0.29
AC087888.1-201ENST00000550884 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
AC087888.1-201ENST00000550884 PLCB2Q00722 1185 aa13.24□□□□□ -0.29
AC087888.1-201ENST00000550884 ANKK1Q8NFD2 765 aa13.24□□□□□ -0.29
AC087888.1-201ENST00000550884 PRSS12P56730 875 aa13.23□□□□□ -0.29
AC087888.1-201ENST00000550884 SOWAHBA6NEL2 793 aa13.22□□□□□ -0.29
AC087888.1-201ENST00000550884 FAM98CQ17RN3 349 aaKnown RBP13.22□□□□□ -0.29
AC087888.1-201ENST00000550884 SMAPO00193 183 aa13.21□□□□□ -0.29
AC087888.1-201ENST00000550884 PACS2Q86VP3 889 aa13.2□□□□□ -0.3
AC087888.1-201ENST00000550884 NPDC1Q9NQX5 325 aaPredicted RBP13.2□□□□□ -0.3
AC087888.1-201ENST00000550884 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
AC087888.1-201ENST00000550884 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
AC087888.1-201ENST00000550884 TATDN2Q93075 761 aa13.14□□□□□ -0.31
AC087888.1-201ENST00000550884 TTC13Q8NBP0 860 aa13.12□□□□□ -0.31
AC087888.1-201ENST00000550884 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
AC087888.1-201ENST00000550884 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
AC087888.1-201ENST00000550884 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
AC087888.1-201ENST00000550884 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
AC087888.1-201ENST00000550884 PADI6Q6TGC4 694 aa13.1□□□□□ -0.31
AC087888.1-201ENST00000550884 NUDT18Q6ZVK8 323 aa13.1□□□□□ -0.31
AC087888.1-201ENST00000550884 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
AC087888.1-201ENST00000550884 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
AC087888.1-201ENST00000550884 SEMA3EO15041 775 aa13.09□□□□□ -0.31
AC087888.1-201ENST00000550884 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
AC087888.1-201ENST00000550884 TSR3Q9UJK0 312 aaKnown RBP13.08□□□□□ -0.32
AC087888.1-201ENST00000550884 NBPF26B4DH59 902 aa13.07□□□□□ -0.32
AC087888.1-201ENST00000550884 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
AC087888.1-201ENST00000550884 ITGBL1O95965 494 aaPredicted RBP13.05□□□□□ -0.32
AC087888.1-201ENST00000550884 NYAP1Q6ZVC0 841 aa13.04□□□□□ -0.32
AC087888.1-201ENST00000550884 PTGDRQ13258 359 aa13.03□□□□□ -0.32
AC087888.1-201ENST00000550884 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
AC087888.1-201ENST00000550884 A0A0G2JS52 829 aa13.01□□□□□ -0.33
AC087888.1-201ENST00000550884 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
AC087888.1-201ENST00000550884 PPP4CP60510 307 aa13□□□□□ -0.33
AC087888.1-201ENST00000550884 EYA1Q99502 592 aa12.99□□□□□ -0.33
AC087888.1-201ENST00000550884 NUTM2FA1L443 756 aa12.97□□□□□ -0.33
AC087888.1-201ENST00000550884 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.33
AC087888.1-201ENST00000550884 SWT1Q5T5J6 900 aaKnown RBP12.96□□□□□ -0.33
AC087888.1-201ENST00000550884 FAM161AQ3B820 660 aa12.94□□□□□ -0.34
AC087888.1-201ENST00000550884 KCNC4Q03721 635 aa12.93□□□□□ -0.34
AC087888.1-201ENST00000550884 RNF40O75150 1001 aa12.92□□□□□ -0.34
AC087888.1-201ENST00000550884 RBM26Q5T8P6 1007 aaKnown RBP12.92□□□□□ -0.34
AC087888.1-201ENST00000550884 APLP1P51693 650 aa12.91□□□□□ -0.34
AC087888.1-201ENST00000550884 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
AC087888.1-201ENST00000550884 ADGRG1Q9Y653 693 aa12.91□□□□□ -0.34
AC087888.1-201ENST00000550884 FCHSD2O94868 740 aa12.88□□□□□ -0.35
AC087888.1-201ENST00000550884 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
AC087888.1-201ENST00000550884 MTRQ99707 1265 aa12.87□□□□□ -0.35
AC087888.1-201ENST00000550884 RGS20O76081 388 aa12.86□□□□□ -0.35
AC087888.1-201ENST00000550884 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
AC087888.1-201ENST00000550884 GPR37O15354 613 aa12.84□□□□□ -0.35
AC087888.1-201ENST00000550884 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
AC087888.1-201ENST00000550884 FECHP22830 423 aa12.83□□□□□ -0.36
AC087888.1-201ENST00000550884 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
AC087888.1-201ENST00000550884 RCCD1A6NED2 376 aa12.82□□□□□ -0.36
AC087888.1-201ENST00000550884 DNAJB2P25686 324 aa12.82□□□□□ -0.36
AC087888.1-201ENST00000550884 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
AC087888.1-201ENST00000550884 IL21Q9HBE4 155 aa12.8□□□□□ -0.36
AC087888.1-201ENST00000550884 HIC1Q14526 733 aa12.78□□□□□ -0.36
AC087888.1-201ENST00000550884 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
AC087888.1-201ENST00000550884 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
AC087888.1-201ENST00000550884 NKX2-3Q8TAU0 364 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms