RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
SMARCC2-211ENST00000550859 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
SMARCC2-211ENST00000550859 KCNK17Q96T54 332 aa10.2□□□□□ -0.78
SMARCC2-211ENST00000550859 RBM26Q5T8P6 1007 aaKnown RBP10.19□□□□□ -0.78
SMARCC2-211ENST00000550859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMARCC2-211ENST00000550859 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
SMARCC2-211ENST00000550859 TSR1Q2NL82 804 aaKnown RBP10.17□□□□□ -0.78
SMARCC2-211ENST00000550859 CERKQ8TCT0 537 aa10.17□□□□□ -0.78
SMARCC2-211ENST00000550859 PCDH10Q9P2E7 1040 aa10.17□□□□□ -0.78
SMARCC2-211ENST00000550859 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
SMARCC2-211ENST00000550859 PSEN2P49810 448 aa10.16□□□□□ -0.78
SMARCC2-211ENST00000550859 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
SMARCC2-211ENST00000550859 PPP1R3GB7ZBB8 358 aa10.14□□□□□ -0.79
SMARCC2-211ENST00000550859 GPIHBP1Q8IV16 184 aa10.14□□□□□ -0.79
SMARCC2-211ENST00000550859 FCHSD2O94868 740 aa10.13□□□□□ -0.79
SMARCC2-211ENST00000550859 POTEEQ6S8J3 1075 aa10.13□□□□□ -0.79
SMARCC2-211ENST00000550859 COL9A1P20849 921 aa10.12□□□□□ -0.79
SMARCC2-211ENST00000550859 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
SMARCC2-211ENST00000550859 CDHR5Q9HBB8 845 aa10.11□□□□□ -0.79
SMARCC2-211ENST00000550859 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMARCC2-211ENST00000550859 PTGDRQ13258 359 aa10.1□□□□□ -0.79
SMARCC2-211ENST00000550859 DMRTA1Q5VZB9 504 aa10.1□□□□□ -0.79
SMARCC2-211ENST00000550859 SLC4A5Q9BY07 1137 aa10.1□□□□□ -0.79
SMARCC2-211ENST00000550859 NPDC1Q9NQX5 325 aaPredicted RBP10.09□□□□□ -0.79
SMARCC2-211ENST00000550859 TK2O00142 265 aa10.08□□□□□ -0.8
SMARCC2-211ENST00000550859 PRSS12P56730 875 aa10.08□□□□□ -0.8
SMARCC2-211ENST00000550859 HIC1Q14526 733 aa10.08□□□□□ -0.8
SMARCC2-211ENST00000550859 STAC3Q96MF2 364 aa10.08□□□□□ -0.8
SMARCC2-211ENST00000550859 ZBED2Q9BTP6 218 aa10.08□□□□□ -0.8
SMARCC2-211ENST00000550859 ONECUT3O60422 494 aaPredicted RBP10.07□□□□□ -0.8
SMARCC2-211ENST00000550859 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
SMARCC2-211ENST00000550859 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
SMARCC2-211ENST00000550859 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
SMARCC2-211ENST00000550859 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
SMARCC2-211ENST00000550859 GNPATO15228 680 aa10.05□□□□□ -0.8
SMARCC2-211ENST00000550859 ADGRD1Q6QNK2 874 aa10.05□□□□□ -0.8
SMARCC2-211ENST00000550859 RBM27Q9P2N5 1060 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-211ENST00000550859 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
SMARCC2-211ENST00000550859 TRIM6-TRIM34B2RNG4 842 aa10.04□□□□□ -0.8
SMARCC2-211ENST00000550859 PROX2Q3B8N5 592 aa10.04□□□□□ -0.8
SMARCC2-211ENST00000550859 ZC3H15Q8WU90 426 aaKnown RBP10.03□□□□□ -0.8
SMARCC2-211ENST00000550859 RABGEF1Q9UJ41 708 aa10.03□□□□□ -0.8
SMARCC2-211ENST00000550859 PADI6Q6TGC4 694 aa10.02□□□□□ -0.81
SMARCC2-211ENST00000550859 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
SMARCC2-211ENST00000550859 KRI1Q8N9T8 703 aaKnown RBP10.01□□□□□ -0.81
SMARCC2-211ENST00000550859 NBPF3Q9H094 633 aa10□□□□□ -0.81
SMARCC2-211ENST00000550859 TSKSQ9UJT2 592 aa10□□□□□ -0.81
SMARCC2-211ENST00000550859 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
SMARCC2-211ENST00000550859 GPR37O15354 613 aa9.99□□□□□ -0.81
SMARCC2-211ENST00000550859 ZMYND10O75800 440 aa9.98□□□□□ -0.81
SMARCC2-211ENST00000550859 MRPL50Q8N5N7 158 aaKnown RBP9.98□□□□□ -0.81
SMARCC2-211ENST00000550859 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
SMARCC2-211ENST00000550859 TATDN2Q93075 761 aa9.97□□□□□ -0.81
SMARCC2-211ENST00000550859 PNMA3Q9UL41 463 aa9.97□□□□□ -0.81
SMARCC2-211ENST00000550859 GOLGA8CPA6NN73 597 aa9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 HRO43593 1189 aa9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 OATP04181 439 aa9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 FECHP22830 423 aa9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 BARGINQ6ZT62 677 aa9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 RBM46Q8TBY0 533 aaKnown RBP9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 MINK1Q8N4C8 1332 aaPredicted RBP9.96□□□□□ -0.82
SMARCC2-211ENST00000550859 FAM198AQ9UFP1 575 aa9.95□□□□□ -0.82
SMARCC2-211ENST00000550859 MAP2K5Q13163 448 aa9.94□□□□□ -0.82
SMARCC2-211ENST00000550859 LAPTM4BQ86VI4 370 aa9.94□□□□□ -0.82
SMARCC2-211ENST00000550859 IRF6O14896 467 aa9.93□□□□□ -0.82
SMARCC2-211ENST00000550859 HDGFP51858 240 aaKnown RBP9.93□□□□□ -0.82
SMARCC2-211ENST00000550859 FAM98CQ17RN3 349 aaKnown RBP9.92□□□□□ -0.82
SMARCC2-211ENST00000550859 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
SMARCC2-211ENST00000550859 SEPT9Q9UHD8 586 aaPredicted RBP9.92□□□□□ -0.82
SMARCC2-211ENST00000550859 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
SMARCC2-211ENST00000550859 SMAPO00193 183 aa9.91□□□□□ -0.82
SMARCC2-211ENST00000550859 FAM161AQ3B820 660 aa9.91□□□□□ -0.82
SMARCC2-211ENST00000550859 SPNS2Q8IVW8 549 aa9.91□□□□□ -0.82
SMARCC2-211ENST00000550859 EYA1Q99502 592 aa9.9□□□□□ -0.82
SMARCC2-211ENST00000550859 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
SMARCC2-211ENST00000550859 PXYLP1Q8TE99 480 aa9.88□□□□□ -0.83
SMARCC2-211ENST00000550859 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
SMARCC2-211ENST00000550859 C3orf80F5H4A9 247 aa9.87□□□□□ -0.83
SMARCC2-211ENST00000550859 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
SMARCC2-211ENST00000550859 METTL3Q86U44 580 aaKnown RBP9.87□□□□□ -0.83
SMARCC2-211ENST00000550859 AK7Q96M32 723 aa9.87□□□□□ -0.83
SMARCC2-211ENST00000550859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
SMARCC2-211ENST00000550859 DNAJB2P25686 324 aa9.86□□□□□ -0.83
SMARCC2-211ENST00000550859 ANKK1Q8NFD2 765 aa9.86□□□□□ -0.83
SMARCC2-211ENST00000550859 WNT2BQ93097 391 aa9.86□□□□□ -0.83
SMARCC2-211ENST00000550859 CCDC102AQ96A19 550 aa9.86□□□□□ -0.83
SMARCC2-211ENST00000550859 SLC24A3Q9HC58 644 aa9.86□□□□□ -0.83
SMARCC2-211ENST00000550859 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
SMARCC2-211ENST00000550859 KCTD12Q96CX2 325 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-211ENST00000550859 LRCH3Q96II8 777 aa9.83□□□□□ -0.84
SMARCC2-211ENST00000550859 SAMD7Q7Z3H4 446 aa9.82□□□□□ -0.84
SMARCC2-211ENST00000550859 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.82□□□□□ -0.84
SMARCC2-211ENST00000550859 RNF166Q96A37 237 aaPredicted RBP9.81□□□□□ -0.84
SMARCC2-211ENST00000550859 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
SMARCC2-211ENST00000550859 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
SMARCC2-211ENST00000550859 PHOX2BQ99453 314 aa9.8□□□□□ -0.84
SMARCC2-211ENST00000550859 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
SMARCC2-211ENST00000550859 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms