RNA–Protein interactions for RNA: ENST00000550859.5

SMARCC2-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-211ENST00000550859 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
SMARCC2-211ENST00000550859 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
SMARCC2-211ENST00000550859 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
SMARCC2-211ENST00000550859 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
SMARCC2-211ENST00000550859 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
SMARCC2-211ENST00000550859 FOXD1Q16676 465 aa18.21■□□□□ 0.51
SMARCC2-211ENST00000550859 ADRA2BP18089 450 aa17.54■□□□□ 0.4
SMARCC2-211ENST00000550859 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
SMARCC2-211ENST00000550859 PIAS4Q8N2W9 510 aaPredicted RBP17.23■□□□□ 0.35
SMARCC2-211ENST00000550859 MSH5O43196 834 aa16.87■□□□□ 0.29
SMARCC2-211ENST00000550859 PPP4R3CPQ6ZMV5 832 aa16.21■□□□□ 0.19
SMARCC2-211ENST00000550859 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
SMARCC2-211ENST00000550859 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
SMARCC2-211ENST00000550859 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
SMARCC2-211ENST00000550859 KCNA4P22459 653 aa15.82■□□□□ 0.12
SMARCC2-211ENST00000550859 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
SMARCC2-211ENST00000550859 DMRT2Q9Y5R5 561 aa15.69■□□□□ 0.1
SMARCC2-211ENST00000550859 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
SMARCC2-211ENST00000550859 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
SMARCC2-211ENST00000550859 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
SMARCC2-211ENST00000550859 POTEDQ86YR6 584 aa15.27■□□□□ 0.04
SMARCC2-211ENST00000550859 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
SMARCC2-211ENST00000550859 DCAF8L1A6NGE4 600 aa15.09■□□□□ 0.01
SMARCC2-211ENST00000550859 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
SMARCC2-211ENST00000550859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.72□□□□□ -0.053e-7■■■■□ 23.4
SMARCC2-211ENST00000550859 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
SMARCC2-211ENST00000550859 SLC4A2P04920 1241 aa14.63□□□□□ -0.07
SMARCC2-211ENST00000550859 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
SMARCC2-211ENST00000550859 ZBTB22O15209 634 aa14.48□□□□□ -0.09
SMARCC2-211ENST00000550859 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
SMARCC2-211ENST00000550859 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
SMARCC2-211ENST00000550859 RNF39Q9H2S5 420 aa14.4□□□□□ -0.1
SMARCC2-211ENST00000550859 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
SMARCC2-211ENST00000550859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
SMARCC2-211ENST00000550859 HNRNPUL2Q1KMD3 747 aaKnown RBP14.34□□□□□ -0.11
SMARCC2-211ENST00000550859 C1QBPQ07021 282 aaKnown RBP14.28□□□□□ -0.12
SMARCC2-211ENST00000550859 SAMD1Q6SPF0 538 aaPredicted RBP14.25□□□□□ -0.13
SMARCC2-211ENST00000550859 APLP2Q06481 763 aa14.21□□□□□ -0.13
SMARCC2-211ENST00000550859 ATXN8OSP0DMR3 200 aa14.11□□□□□ -0.15
SMARCC2-211ENST00000550859 CACNB1Q02641 598 aaPredicted RBP14.08□□□□□ -0.16
SMARCC2-211ENST00000550859 CAPN15O75808 1086 aa14.01□□□□□ -0.17
SMARCC2-211ENST00000550859 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
SMARCC2-211ENST00000550859 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
SMARCC2-211ENST00000550859 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
SMARCC2-211ENST00000550859 ATF5Q9Y2D1 282 aaPredicted RBP13.93□□□□□ -0.18
SMARCC2-211ENST00000550859 DSG3P32926 999 aa13.71□□□□□ -0.21
SMARCC2-211ENST00000550859 POLA2Q14181 598 aa13.71□□□□□ -0.21
SMARCC2-211ENST00000550859 ABCB7O75027 752 aa13.69□□□□□ -0.22
SMARCC2-211ENST00000550859 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
SMARCC2-211ENST00000550859 FBLN2P98095 1184 aa13.49□□□□□ -0.25
SMARCC2-211ENST00000550859 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
SMARCC2-211ENST00000550859 OSCARQ8IYS5 282 aa13.19□□□□□ -0.3
SMARCC2-211ENST00000550859 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
SMARCC2-211ENST00000550859 FKBP8Q14318 412 aa13.13□□□□□ -0.31
SMARCC2-211ENST00000550859 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
SMARCC2-211ENST00000550859 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
SMARCC2-211ENST00000550859 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
SMARCC2-211ENST00000550859 SPDYE2Q495Y8 402 aa13.12□□□□□ -0.31
SMARCC2-211ENST00000550859 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
SMARCC2-211ENST00000550859 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
SMARCC2-211ENST00000550859 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
SMARCC2-211ENST00000550859 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMARCC2-211ENST00000550859 PROM2Q8N271 834 aa12.82□□□□□ -0.36
SMARCC2-211ENST00000550859 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
SMARCC2-211ENST00000550859 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
SMARCC2-211ENST00000550859 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
SMARCC2-211ENST00000550859 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
SMARCC2-211ENST00000550859 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
SMARCC2-211ENST00000550859 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
SMARCC2-211ENST00000550859 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
SMARCC2-211ENST00000550859 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
SMARCC2-211ENST00000550859 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
SMARCC2-211ENST00000550859 MIER1Q8N108 512 aa12.49□□□□□ -0.41
SMARCC2-211ENST00000550859 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
SMARCC2-211ENST00000550859 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
SMARCC2-211ENST00000550859 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■□□□ 11.8
SMARCC2-211ENST00000550859 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
SMARCC2-211ENST00000550859 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-211ENST00000550859 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
SMARCC2-211ENST00000550859 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
SMARCC2-211ENST00000550859 KLHL34Q8N239 644 aa12.35□□□□□ -0.43
SMARCC2-211ENST00000550859 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
SMARCC2-211ENST00000550859 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
SMARCC2-211ENST00000550859 NPM1P06748 294 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMARCC2-211ENST00000550859 FARP1Q9Y4F1 1045 aaPredicted RBP12.25□□□□□ -0.45
SMARCC2-211ENST00000550859 SPOCK2Q92563 424 aa12.21□□□□□ -0.45
SMARCC2-211ENST00000550859 MNX1P50219 401 aaPredicted RBP12.19□□□□□ -0.46
SMARCC2-211ENST00000550859 POTEHQ6S545 545 aa12.13□□□□□ -0.47
SMARCC2-211ENST00000550859 NUBP1P53384 320 aa12.07□□□□□ -0.48
SMARCC2-211ENST00000550859 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
SMARCC2-211ENST00000550859 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
SMARCC2-211ENST00000550859 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
SMARCC2-211ENST00000550859 HAX1O00165 279 aa12.04□□□□□ -0.48
SMARCC2-211ENST00000550859 GSE1Q14687 1217 aa12.04□□□□□ -0.48
SMARCC2-211ENST00000550859 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
SMARCC2-211ENST00000550859 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
SMARCC2-211ENST00000550859 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
SMARCC2-211ENST00000550859 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
SMARCC2-211ENST00000550859 CD44P16070 742 aaKnown RBP12□□□□□ -0.49
SMARCC2-211ENST00000550859 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms