RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 RBM33Q96EV2 1170 aaKnown RBP10.87□□□□□ -0.67
RAB3IP-214ENST00000550847 COL9A1P20849 921 aa10.86□□□□□ -0.67
RAB3IP-214ENST00000550847 MMRN1Q13201 1228 aa10.86□□□□□ -0.67
RAB3IP-214ENST00000550847 FBXW7Q969H0 707 aa10.86□□□□□ -0.67
RAB3IP-214ENST00000550847 EPAS1Q99814 870 aa10.86□□□□□ -0.67
RAB3IP-214ENST00000550847 PTPREP23469 700 aa10.85□□□□□ -0.67
RAB3IP-214ENST00000550847 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
RAB3IP-214ENST00000550847 OSBPP22059 807 aa10.84□□□□□ -0.67
RAB3IP-214ENST00000550847 EN1Q05925 392 aaPredicted RBP10.84□□□□□ -0.67
RAB3IP-214ENST00000550847 TSR1Q2NL82 804 aaKnown RBP10.84□□□□□ -0.67
RAB3IP-214ENST00000550847 SEMA3EO15041 775 aa10.83□□□□□ -0.68
RAB3IP-214ENST00000550847 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
RAB3IP-214ENST00000550847 ZBED2Q9BTP6 218 aa10.82□□□□□ -0.68
RAB3IP-214ENST00000550847 VPS9D1Q9Y2B5 631 aa10.81□□□□□ -0.68
RAB3IP-214ENST00000550847 PPP1R3GB7ZBB8 358 aa10.8□□□□□ -0.68
RAB3IP-214ENST00000550847 TK2O00142 265 aa10.8□□□□□ -0.68
RAB3IP-214ENST00000550847 HRO43593 1189 aa10.8□□□□□ -0.68
RAB3IP-214ENST00000550847 MAP3K7O43318 606 aa10.79□□□□□ -0.68
RAB3IP-214ENST00000550847 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
RAB3IP-214ENST00000550847 CDHR5Q9HBB8 845 aa10.79□□□□□ -0.68
RAB3IP-214ENST00000550847 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
RAB3IP-214ENST00000550847 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
RAB3IP-214ENST00000550847 MYT1LQ9UL68 1186 aa10.75□□□□□ -0.69
RAB3IP-214ENST00000550847 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
RAB3IP-214ENST00000550847 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
RAB3IP-214ENST00000550847 RNF166Q96A37 237 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-214ENST00000550847 NPDC1Q9NQX5 325 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-214ENST00000550847 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
RAB3IP-214ENST00000550847 TSKSQ9UJT2 592 aa10.69□□□□□ -0.7
RAB3IP-214ENST00000550847 C3orf80F5H4A9 247 aa10.68□□□□□ -0.7
RAB3IP-214ENST00000550847 TRIM6-TRIM34B2RNG4 842 aa10.67□□□□□ -0.7
RAB3IP-214ENST00000550847 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-214ENST00000550847 KIAA1468Q9P260 1216 aa10.67□□□□□ -0.7
RAB3IP-214ENST00000550847 CDCA7LQ96GN5 454 aa10.66□□□□□ -0.7
RAB3IP-214ENST00000550847 RABGEF1Q9UJ41 708 aa10.66□□□□□ -0.7
RAB3IP-214ENST00000550847 PRSS12P56730 875 aa10.65□□□□□ -0.7
RAB3IP-214ENST00000550847 PTGDRQ13258 359 aa10.63□□□□□ -0.71
RAB3IP-214ENST00000550847 SEPT9Q9UHD8 586 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-214ENST00000550847 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
RAB3IP-214ENST00000550847 MRPL50Q8N5N7 158 aaKnown RBP10.62□□□□□ -0.71
RAB3IP-214ENST00000550847 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
RAB3IP-214ENST00000550847 CERKQ8TCT0 537 aa10.62□□□□□ -0.71
RAB3IP-214ENST00000550847 NUTM2FA1L443 756 aa10.61□□□□□ -0.71
RAB3IP-214ENST00000550847 PADI6Q6TGC4 694 aa10.61□□□□□ -0.71
RAB3IP-214ENST00000550847 NBPF3Q9H094 633 aa10.61□□□□□ -0.71
RAB3IP-214ENST00000550847 GPR37O15354 613 aa10.6□□□□□ -0.71
RAB3IP-214ENST00000550847 KCTD12Q96CX2 325 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-214ENST00000550847 SMAPO00193 183 aa10.59□□□□□ -0.71
RAB3IP-214ENST00000550847 STAC3Q96MF2 364 aa10.59□□□□□ -0.71
RAB3IP-214ENST00000550847 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
RAB3IP-214ENST00000550847 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
RAB3IP-214ENST00000550847 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
RAB3IP-214ENST00000550847 LAPTM4BQ86VI4 370 aa10.55□□□□□ -0.72
RAB3IP-214ENST00000550847 WNT2BQ93097 391 aa10.55□□□□□ -0.72
RAB3IP-214ENST00000550847 FAM98CQ17RN3 349 aaKnown RBP10.54□□□□□ -0.72
RAB3IP-214ENST00000550847 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
RAB3IP-214ENST00000550847 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
RAB3IP-214ENST00000550847 TATDN2Q93075 761 aa10.54□□□□□ -0.72
RAB3IP-214ENST00000550847 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
RAB3IP-214ENST00000550847 FECHP22830 423 aa10.53□□□□□ -0.72
RAB3IP-214ENST00000550847 FAM161AQ3B820 660 aa10.53□□□□□ -0.72
RAB3IP-214ENST00000550847 PNMA3Q9UL41 463 aa10.53□□□□□ -0.72
RAB3IP-214ENST00000550847 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
RAB3IP-214ENST00000550847 FCHSD2O94868 740 aa10.52□□□□□ -0.73
RAB3IP-214ENST00000550847 BCAMP50895 628 aa10.52□□□□□ -0.73
RAB3IP-214ENST00000550847 NBPF26B4DH59 902 aa10.51□□□□□ -0.73
RAB3IP-214ENST00000550847 PTPN5P54829 565 aa10.5□□□□□ -0.73
RAB3IP-214ENST00000550847 GPIHBP1Q8IV16 184 aa10.49□□□□□ -0.73
RAB3IP-214ENST00000550847 ANKK1Q8NFD2 765 aa10.49□□□□□ -0.73
RAB3IP-214ENST00000550847 EYA1Q99502 592 aa10.49□□□□□ -0.73
RAB3IP-214ENST00000550847 ADGRG1Q9Y653 693 aa10.49□□□□□ -0.73
RAB3IP-214ENST00000550847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
RAB3IP-214ENST00000550847 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
RAB3IP-214ENST00000550847 SOWAHBA6NEL2 793 aa10.47□□□□□ -0.73
RAB3IP-214ENST00000550847 HIC1Q14526 733 aa10.47□□□□□ -0.73
RAB3IP-214ENST00000550847 GNPATO15228 680 aa10.46□□□□□ -0.73
RAB3IP-214ENST00000550847 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
RAB3IP-214ENST00000550847 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
RAB3IP-214ENST00000550847 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-214ENST00000550847 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
RAB3IP-214ENST00000550847 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
RAB3IP-214ENST00000550847 SWT1Q5T5J6 900 aaKnown RBP10.41□□□□□ -0.74
RAB3IP-214ENST00000550847 TULP1O00294 542 aaPredicted RBP10.4□□□□□ -0.74
RAB3IP-214ENST00000550847 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
RAB3IP-214ENST00000550847 METTL3Q86U44 580 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-214ENST00000550847 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
RAB3IP-214ENST00000550847 PXYLP1Q8TE99 480 aa10.39□□□□□ -0.75
RAB3IP-214ENST00000550847 RCCD1A6NED2 376 aa10.38□□□□□ -0.75
RAB3IP-214ENST00000550847 PHOX2BQ99453 314 aa10.38□□□□□ -0.75
RAB3IP-214ENST00000550847 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
RAB3IP-214ENST00000550847 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
RAB3IP-214ENST00000550847 TSR3Q9UJK0 312 aaKnown RBP10.37□□□□□ -0.75
RAB3IP-214ENST00000550847 DNAJB2P25686 324 aa10.36□□□□□ -0.75
RAB3IP-214ENST00000550847 RNF40O75150 1001 aa10.34□□□□□ -0.75
RAB3IP-214ENST00000550847 OATP04181 439 aa10.34□□□□□ -0.75
RAB3IP-214ENST00000550847 ZC3H15Q8WU90 426 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-214ENST00000550847 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
RAB3IP-214ENST00000550847 PPP4CP60510 307 aa10.32□□□□□ -0.76
RAB3IP-214ENST00000550847 MAP2K5Q13163 448 aa10.32□□□□□ -0.76
RAB3IP-214ENST00000550847 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms