RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
TMEM116-213ENST00000550831 ABCC1P33527 1531 aa13.25□□□□□ -0.29
TMEM116-213ENST00000550831 SYCP2Q9BX26 1530 aa13.25□□□□□ -0.29
TMEM116-213ENST00000550831 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
TMEM116-213ENST00000550831 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
TMEM116-213ENST00000550831 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
TMEM116-213ENST00000550831 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
TMEM116-213ENST00000550831 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
TMEM116-213ENST00000550831 EFCAB2Q5VUJ9 269 aa13.22□□□□□ -0.29
TMEM116-213ENST00000550831 UNC13BO14795 1591 aa13.21□□□□□ -0.29
TMEM116-213ENST00000550831 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.29
TMEM116-213ENST00000550831 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.3
TMEM116-213ENST00000550831 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
TMEM116-213ENST00000550831 DUOX2Q9NRD8 1548 aa13.19□□□□□ -0.3
TMEM116-213ENST00000550831 MAGI2Q86UL8 1455 aa13.18□□□□□ -0.3
TMEM116-213ENST00000550831 ERBINQ96RT1 1412 aa13.17□□□□□ -0.3
TMEM116-213ENST00000550831 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
TMEM116-213ENST00000550831 IQGAP3Q86VI3 1631 aa13.14□□□□□ -0.31
TMEM116-213ENST00000550831 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
TMEM116-213ENST00000550831 FANCAO15360 1455 aa13.13□□□□□ -0.31
TMEM116-213ENST00000550831 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
TMEM116-213ENST00000550831 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
TMEM116-213ENST00000550831 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
TMEM116-213ENST00000550831 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
TMEM116-213ENST00000550831 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
TMEM116-213ENST00000550831 NUP155O75694 1391 aa13.13□□□□□ -0.31
TMEM116-213ENST00000550831 ATP10AO60312 1499 aa13.1□□□□□ -0.31
TMEM116-213ENST00000550831 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
TMEM116-213ENST00000550831 PKD2Q13563 968 aa13.09□□□□□ -0.31
TMEM116-213ENST00000550831 L3MBTL2Q969R5 705 aa13.09□□□□□ -0.31
TMEM116-213ENST00000550831 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
TMEM116-213ENST00000550831 EIF2AK4Q9P2K8 1649 aaKnown RBP13.09□□□□□ -0.31
TMEM116-213ENST00000550831 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
TMEM116-213ENST00000550831 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
TMEM116-213ENST00000550831 MIER1Q8N108 512 aa13.05□□□□□ -0.32
TMEM116-213ENST00000550831 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
TMEM116-213ENST00000550831 SPAG9O60271 1321 aaKnown RBP13.05□□□□□ -0.32
TMEM116-213ENST00000550831 KDM5CP41229 1560 aa13.05□□□□□ -0.32
TMEM116-213ENST00000550831 VWDEQ8N2E2 1590 aa13.05□□□□□ -0.32
TMEM116-213ENST00000550831 NEO1Q92859 1461 aa13.05□□□□□ -0.32
TMEM116-213ENST00000550831 ADAMTSL3P82987 1691 aa13.04□□□□□ -0.32
TMEM116-213ENST00000550831 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
TMEM116-213ENST00000550831 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
TMEM116-213ENST00000550831 KIDINS220Q9ULH0 1771 aa13.03□□□□□ -0.32
TMEM116-213ENST00000550831 FBXO41Q8TF61 875 aa13.03□□□□□ -0.32
TMEM116-213ENST00000550831 BCORL1Q5H9F3 1711 aa13.02□□□□□ -0.32
TMEM116-213ENST00000550831 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
TMEM116-213ENST00000550831 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.33
TMEM116-213ENST00000550831 PTPRMP28827 1452 aa13.02□□□□□ -0.33
TMEM116-213ENST00000550831 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
TMEM116-213ENST00000550831 MLH3Q9UHC1 1453 aa13.02□□□□□ -0.33
TMEM116-213ENST00000550831 CAPN15O75808 1086 aa13.01□□□□□ -0.33
TMEM116-213ENST00000550831 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
TMEM116-213ENST00000550831 DHX29Q7Z478 1369 aaKnown RBP13.01□□□□□ -0.33
TMEM116-213ENST00000550831 PRDM15P57071 1507 aaPredicted RBP13.01□□□□□ -0.33
TMEM116-213ENST00000550831 POLR1AO95602 1720 aaPredicted RBP13.01□□□□□ -0.33
TMEM116-213ENST00000550831 TET3O43151 1660 aa13□□□□□ -0.33
TMEM116-213ENST00000550831 POGZQ7Z3K3 1410 aa13□□□□□ -0.33
TMEM116-213ENST00000550831 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
TMEM116-213ENST00000550831 NEURL4Q96JN8 1562 aa12.99□□□□□ -0.33
TMEM116-213ENST00000550831 RALGAPBQ86X10 1494 aa12.99□□□□□ -0.33
TMEM116-213ENST00000550831 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
TMEM116-213ENST00000550831 MROH1Q8NDA8 1641 aa12.98□□□□□ -0.33
TMEM116-213ENST00000550831 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
TMEM116-213ENST00000550831 CCDC144AA2RUR9 1427 aa12.98□□□□□ -0.33
TMEM116-213ENST00000550831 PTPRTO14522 1441 aa12.98□□□□□ -0.33
TMEM116-213ENST00000550831 E9PCH4 1651 aa12.97□□□□□ -0.33
TMEM116-213ENST00000550831 CACNB1Q02641 598 aaPredicted RBP12.97□□□□□ -0.33
TMEM116-213ENST00000550831 FRMPD1Q5SYB0 1578 aa12.97□□□□□ -0.33
TMEM116-213ENST00000550831 LMTK2Q8IWU2 1503 aa12.97□□□□□ -0.33
TMEM116-213ENST00000550831 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
TMEM116-213ENST00000550831 TRPM2O94759 1503 aa12.96□□□□□ -0.34
TMEM116-213ENST00000550831 HSPA5P11021 654 aaKnown RBP12.96□□□□□ -0.34
TMEM116-213ENST00000550831 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
TMEM116-213ENST00000550831 ARHGEF40Q8TER5 1519 aa12.94□□□□□ -0.34
TMEM116-213ENST00000550831 LMTK3Q96Q04 1460 aa12.94□□□□□ -0.34
TMEM116-213ENST00000550831 LAMC1P11047 1609 aa12.94□□□□□ -0.34
TMEM116-213ENST00000550831 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
TMEM116-213ENST00000550831 A2MP01023 1474 aa12.93□□□□□ -0.34
TMEM116-213ENST00000550831 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
TMEM116-213ENST00000550831 KANK1Q14678 1352 aa12.93□□□□□ -0.34
TMEM116-213ENST00000550831 CEP152O94986 1710 aa12.92□□□□□ -0.34
TMEM116-213ENST00000550831 RAPGEF3O95398 923 aa12.92□□□□□ -0.34
TMEM116-213ENST00000550831 STAC3Q96MF2 364 aa12.92□□□□□ -0.34
TMEM116-213ENST00000550831 TRPM1Q7Z4N2 1603 aa12.92□□□□□ -0.34
TMEM116-213ENST00000550831 ARID4BQ4LE39 1312 aaPredicted RBP12.91□□□□□ -0.34
TMEM116-213ENST00000550831 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
TMEM116-213ENST00000550831 RIMS1Q86UR5 1692 aaKnown RBP12.91□□□□□ -0.34
TMEM116-213ENST00000550831 PRAG1Q86YV5 1406 aa12.9□□□□□ -0.34
TMEM116-213ENST00000550831 EFCAB6Q5THR3 1501 aa12.9□□□□□ -0.34
TMEM116-213ENST00000550831 ABCA6Q8N139 1617 aa12.9□□□□□ -0.34
TMEM116-213ENST00000550831 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
TMEM116-213ENST00000550831 WASHC2AQ641Q2 1341 aa12.9□□□□□ -0.34
TMEM116-213ENST00000550831 ZMYM4Q5VZL5 1548 aa12.9□□□□□ -0.34
TMEM116-213ENST00000550831 CCDC7Q96M83 1385 aa12.88□□□□□ -0.35
TMEM116-213ENST00000550831 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
TMEM116-213ENST00000550831 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
TMEM116-213ENST00000550831 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-213ENST00000550831 USP47Q96K76 1375 aa12.87□□□□□ -0.35
TMEM116-213ENST00000550831 CNTLNQ9NXG0 1405 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms