RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 TSHZ2Q9NRE2 1034 aa13.92□□□□□ -0.18
GNPTAB-208ENST00000550718 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
GNPTAB-208ENST00000550718 STAC3Q96MF2 364 aa13.9□□□□□ -0.18
GNPTAB-208ENST00000550718 C6orf132Q5T0Z8 1188 aa13.87□□□□□ -0.19
GNPTAB-208ENST00000550718 DDX12PQ92771 950 aa13.87□□□□□ -0.19
GNPTAB-208ENST00000550718 HCSTQ9UBK5 93 aa13.86□□□□□ -0.19
GNPTAB-208ENST00000550718 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
GNPTAB-208ENST00000550718 NBPF3Q9H094 633 aa13.84□□□□□ -0.19
GNPTAB-208ENST00000550718 RABGEF1Q9UJ41 708 aa13.84□□□□□ -0.19
GNPTAB-208ENST00000550718 COL9A1P20849 921 aa13.83□□□□□ -0.2
GNPTAB-208ENST00000550718 PLCB2Q00722 1185 aa13.83□□□□□ -0.2
GNPTAB-208ENST00000550718 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
GNPTAB-208ENST00000550718 NBR1Q14596 966 aa13.81□□□□□ -0.2
GNPTAB-208ENST00000550718 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
GNPTAB-208ENST00000550718 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
GNPTAB-208ENST00000550718 KCTD12Q96CX2 325 aaKnown RBP13.77□□□□□ -0.21
GNPTAB-208ENST00000550718 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
GNPTAB-208ENST00000550718 PROX2Q3B8N5 592 aa13.76□□□□□ -0.21
GNPTAB-208ENST00000550718 MAP3K7O43318 606 aa13.75□□□□□ -0.21
GNPTAB-208ENST00000550718 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
GNPTAB-208ENST00000550718 CERKQ8TCT0 537 aa13.74□□□□□ -0.21
GNPTAB-208ENST00000550718 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
GNPTAB-208ENST00000550718 P3H3Q8IVL6 736 aa13.73□□□□□ -0.21
GNPTAB-208ENST00000550718 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
GNPTAB-208ENST00000550718 GRXCR2A6NFK2 248 aa13.72□□□□□ -0.21
GNPTAB-208ENST00000550718 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
GNPTAB-208ENST00000550718 OSBPP22059 807 aa13.71□□□□□ -0.21
GNPTAB-208ENST00000550718 TSR1Q2NL82 804 aaKnown RBP13.7□□□□□ -0.22
GNPTAB-208ENST00000550718 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
GNPTAB-208ENST00000550718 KIAA1468Q9P260 1216 aa13.7□□□□□ -0.22
GNPTAB-208ENST00000550718 WNT2BQ93097 391 aa13.69□□□□□ -0.22
GNPTAB-208ENST00000550718 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
GNPTAB-208ENST00000550718 PACS2Q86VP3 889 aa13.65□□□□□ -0.22
GNPTAB-208ENST00000550718 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
GNPTAB-208ENST00000550718 ANKK1Q8NFD2 765 aa13.64□□□□□ -0.23
GNPTAB-208ENST00000550718 PRSS12P56730 875 aa13.63□□□□□ -0.23
GNPTAB-208ENST00000550718 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
GNPTAB-208ENST00000550718 CDCA7LQ96GN5 454 aa13.62□□□□□ -0.23
GNPTAB-208ENST00000550718 ZFRQ96KR1 1074 aaKnown RBP13.62□□□□□ -0.23
GNPTAB-208ENST00000550718 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
GNPTAB-208ENST00000550718 PTPN5P54829 565 aa13.6□□□□□ -0.23
GNPTAB-208ENST00000550718 PLA2G2EQ9NZK7 142 aa13.6□□□□□ -0.23
GNPTAB-208ENST00000550718 SOWAHBA6NEL2 793 aa13.58□□□□□ -0.24
GNPTAB-208ENST00000550718 SEPT9Q9UHD8 586 aaPredicted RBP13.57□□□□□ -0.24
GNPTAB-208ENST00000550718 MLLT3P42568 568 aaPredicted RBP13.56□□□□□ -0.24
GNPTAB-208ENST00000550718 NYAP1Q6ZVC0 841 aa13.56□□□□□ -0.24
GNPTAB-208ENST00000550718 CDHR5Q9HBB8 845 aa13.56□□□□□ -0.24
GNPTAB-208ENST00000550718 IFFO2Q5TF58 517 aa13.55□□□□□ -0.24
GNPTAB-208ENST00000550718 NPDC1Q9NQX5 325 aaPredicted RBP13.55□□□□□ -0.24
GNPTAB-208ENST00000550718 TTC13Q8NBP0 860 aa13.54□□□□□ -0.24
GNPTAB-208ENST00000550718 NBPF26B4DH59 902 aa13.53□□□□□ -0.24
GNPTAB-208ENST00000550718 FAM198AQ9UFP1 575 aa13.53□□□□□ -0.24
GNPTAB-208ENST00000550718 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
GNPTAB-208ENST00000550718 BCAMP50895 628 aa13.5□□□□□ -0.25
GNPTAB-208ENST00000550718 TATDN2Q93075 761 aa13.5□□□□□ -0.25
GNPTAB-208ENST00000550718 LRCH3Q96II8 777 aa13.49□□□□□ -0.25
GNPTAB-208ENST00000550718 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.49□□□□□ -0.25
GNPTAB-208ENST00000550718 SEMA3EO15041 775 aa13.46□□□□□ -0.25
GNPTAB-208ENST00000550718 TSR3Q9UJK0 312 aaKnown RBP13.46□□□□□ -0.25
GNPTAB-208ENST00000550718 PNMA3Q9UL41 463 aa13.46□□□□□ -0.25
GNPTAB-208ENST00000550718 PTGDRQ13258 359 aa13.45□□□□□ -0.26
GNPTAB-208ENST00000550718 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
GNPTAB-208ENST00000550718 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
GNPTAB-208ENST00000550718 NUDT18Q6ZVK8 323 aa13.43□□□□□ -0.26
GNPTAB-208ENST00000550718 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
GNPTAB-208ENST00000550718 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
GNPTAB-208ENST00000550718 SMAPO00193 183 aa13.42□□□□□ -0.26
GNPTAB-208ENST00000550718 ITGBL1O95965 494 aaPredicted RBP13.42□□□□□ -0.26
GNPTAB-208ENST00000550718 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
GNPTAB-208ENST00000550718 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
GNPTAB-208ENST00000550718 SMYD5Q6GMV2 418 aa13.41□□□□□ -0.26
GNPTAB-208ENST00000550718 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
GNPTAB-208ENST00000550718 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
GNPTAB-208ENST00000550718 SAMD7Q7Z3H4 446 aa13.39□□□□□ -0.27
GNPTAB-208ENST00000550718 EYA1Q99502 592 aa13.37□□□□□ -0.27
GNPTAB-208ENST00000550718 NUTM2FA1L443 756 aa13.36□□□□□ -0.27
GNPTAB-208ENST00000550718 FCHSD2O94868 740 aa13.36□□□□□ -0.27
GNPTAB-208ENST00000550718 PPP4CP60510 307 aa13.36□□□□□ -0.27
GNPTAB-208ENST00000550718 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
GNPTAB-208ENST00000550718 RGS20O76081 388 aa13.33□□□□□ -0.28
GNPTAB-208ENST00000550718 A0A0G2JS52 829 aa13.31□□□□□ -0.28
GNPTAB-208ENST00000550718 HIC1Q14526 733 aa13.3□□□□□ -0.28
GNPTAB-208ENST00000550718 SLF2Q8IX21 1173 aa13.3□□□□□ -0.28
GNPTAB-208ENST00000550718 RBM46Q8TBY0 533 aaKnown RBP13.3□□□□□ -0.28
GNPTAB-208ENST00000550718 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
GNPTAB-208ENST00000550718 KCNC4Q03721 635 aa13.29□□□□□ -0.28
GNPTAB-208ENST00000550718 SLC4A3P48751 1232 aa13.28□□□□□ -0.28
GNPTAB-208ENST00000550718 DNAJB2P25686 324 aa13.27□□□□□ -0.29
GNPTAB-208ENST00000550718 SWT1Q5T5J6 900 aaKnown RBP13.27□□□□□ -0.29
GNPTAB-208ENST00000550718 RBM26Q5T8P6 1007 aaKnown RBP13.26□□□□□ -0.29
GNPTAB-208ENST00000550718 OATP04181 439 aa13.23□□□□□ -0.29
GNPTAB-208ENST00000550718 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
GNPTAB-208ENST00000550718 GNPATO15228 680 aa13.21□□□□□ -0.29
GNPTAB-208ENST00000550718 GPR37O15354 613 aa13.21□□□□□ -0.29
GNPTAB-208ENST00000550718 RNF40O75150 1001 aa13.21□□□□□ -0.29
GNPTAB-208ENST00000550718 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
GNPTAB-208ENST00000550718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.2□□□□□ -0.3
GNPTAB-208ENST00000550718 PRR14Q9BWN1 585 aa13.2□□□□□ -0.3
GNPTAB-208ENST00000550718 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
GNPTAB-208ENST00000550718 APLP1P51693 650 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms