RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
UBE2N-205ENST00000550657 CC2D1BQ5T0F9 858 aaKnown RBP12.42□□□□□ -0.42
UBE2N-205ENST00000550657 SAMD9LQ8IVG5 1584 aa12.42□□□□□ -0.42
UBE2N-205ENST00000550657 FAM135AQ9P2D6 1515 aa12.42□□□□□ -0.42
UBE2N-205ENST00000550657 MYT1LQ9UL68 1186 aa12.42□□□□□ -0.42
UBE2N-205ENST00000550657 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
UBE2N-205ENST00000550657 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
UBE2N-205ENST00000550657 ERCC6L2Q5T890 1561 aa12.4□□□□□ -0.42
UBE2N-205ENST00000550657 MSH5O43196 834 aa12.4□□□□□ -0.43
UBE2N-205ENST00000550657 MYBBP1AQ9BQG0 1328 aaKnown RBP12.39□□□□□ -0.43
UBE2N-205ENST00000550657 ARHGEF12Q9NZN5 1544 aa12.38□□□□□ -0.43
UBE2N-205ENST00000550657 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
UBE2N-205ENST00000550657 SMG6Q86US8 1419 aaKnown RBP12.38□□□□□ -0.43
UBE2N-205ENST00000550657 ARHGEF5Q12774 1597 aa12.38□□□□□ -0.43
UBE2N-205ENST00000550657 RALBP1Q15311 655 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 TTC37Q6PGP7 1564 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 ERICH6Q7L0X2 663 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 CDC42BPBQ9Y5S2 1711 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 EFCAB2Q5VUJ9 269 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
UBE2N-205ENST00000550657 PLA2R1Q13018 1463 aa12.36□□□□□ -0.43
UBE2N-205ENST00000550657 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.36□□□□□ -0.432e-6■■□□□ 12.3
UBE2N-205ENST00000550657 PREX2Q70Z35 1606 aa12.36□□□□□ -0.43
UBE2N-205ENST00000550657 PANK3Q9H999 370 aa12.36□□□□□ -0.43
UBE2N-205ENST00000550657 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
UBE2N-205ENST00000550657 DISP3Q9P2K9 1392 aa12.34□□□□□ -0.43
UBE2N-205ENST00000550657 ABCC2Q92887 1545 aa12.34□□□□□ -0.43
UBE2N-205ENST00000550657 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
UBE2N-205ENST00000550657 POLR1AO95602 1720 aaPredicted RBP12.34□□□□□ -0.43
UBE2N-205ENST00000550657 A2MP01023 1474 aa12.34□□□□□ -0.43
UBE2N-205ENST00000550657 BRD4O60885 1362 aaPredicted RBP12.33□□□□□ -0.43
UBE2N-205ENST00000550657 SPAG9O60271 1321 aaKnown RBP12.32□□□□□ -0.44
UBE2N-205ENST00000550657 TMF1P82094 1093 aa12.32□□□□□ -0.44
UBE2N-205ENST00000550657 TESK2Q96S53 571 aa12.32□□□□□ -0.44
UBE2N-205ENST00000550657 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
UBE2N-205ENST00000550657 TRAPPC8Q9Y2L5 1435 aa12.31□□□□□ -0.44
UBE2N-205ENST00000550657 PER1O15534 1290 aaPredicted RBP12.31□□□□□ -0.44
UBE2N-205ENST00000550657 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
UBE2N-205ENST00000550657 FANCIQ9NVI1 1328 aa12.3□□□□□ -0.44
UBE2N-205ENST00000550657 LRPPRCP42704 1394 aaKnown RBP12.29□□□□□ -0.44
UBE2N-205ENST00000550657 PLCH2O75038 1416 aa12.29□□□□□ -0.44
UBE2N-205ENST00000550657 MYO5CQ9NQX4 1742 aa12.29□□□□□ -0.44
UBE2N-205ENST00000550657 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
UBE2N-205ENST00000550657 RCAN3Q9UKA8 241 aa12.28□□□□□ -0.44
UBE2N-205ENST00000550657 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
UBE2N-205ENST00000550657 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
UBE2N-205ENST00000550657 ZCCHC11Q5TAX3 1644 aaKnown RBP12.28□□□□□ -0.44
UBE2N-205ENST00000550657 KIF3BO15066 747 aa12.27□□□□□ -0.44
UBE2N-205ENST00000550657 RRP1P56182 461 aaKnown RBP12.27□□□□□ -0.45
UBE2N-205ENST00000550657 PLIN1O60240 522 aa12.27□□□□□ -0.45
UBE2N-205ENST00000550657 RNF123Q5XPI4 1314 aa12.26□□□□□ -0.45
UBE2N-205ENST00000550657 DUOX2Q9NRD8 1548 aa12.26□□□□□ -0.45
UBE2N-205ENST00000550657 GPRASP1Q5JY77 1395 aa12.26□□□□□ -0.45
UBE2N-205ENST00000550657 KNSTRNQ9Y448 316 aa12.25□□□□□ -0.45
UBE2N-205ENST00000550657 TRPM1Q7Z4N2 1603 aa12.25□□□□□ -0.45
UBE2N-205ENST00000550657 COL17A1Q9UMD9 1497 aaPredicted RBP12.25□□□□□ -0.45
UBE2N-205ENST00000550657 UNC13BO14795 1591 aa12.24□□□□□ -0.45
UBE2N-205ENST00000550657 MAST1Q9Y2H9 1570 aa12.24□□□□□ -0.45
UBE2N-205ENST00000550657 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
UBE2N-205ENST00000550657 UHRF1BP1LA0JNW5 1464 aa12.23□□□□□ -0.45
UBE2N-205ENST00000550657 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
UBE2N-205ENST00000550657 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBE2N-205ENST00000550657 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.45
UBE2N-205ENST00000550657 IQGAP3Q86VI3 1631 aa12.21□□□□□ -0.45
UBE2N-205ENST00000550657 PLXNC1O60486 1568 aa12.21□□□□□ -0.46
UBE2N-205ENST00000550657 CFAP70Q5T0N1 1121 aa12.2□□□□□ -0.46
UBE2N-205ENST00000550657 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
UBE2N-205ENST00000550657 PRDM15P57071 1507 aaPredicted RBP12.2□□□□□ -0.46
UBE2N-205ENST00000550657 PDE3BQ13370 1112 aa12.19□□□□□ -0.46
UBE2N-205ENST00000550657 ABCC1P33527 1531 aa12.19□□□□□ -0.46
UBE2N-205ENST00000550657 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
UBE2N-205ENST00000550657 SENP3Q9H4L4 574 aaPredicted RBP12.19□□□□□ -0.46
UBE2N-205ENST00000550657 WASHC2CQ9Y4E1 1318 aa12.19□□□□□ -0.46
UBE2N-205ENST00000550657 KANK1Q14678 1352 aa12.19□□□□□ -0.46
UBE2N-205ENST00000550657 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
UBE2N-205ENST00000550657 SKAP1Q86WV1 359 aa12.18□□□□□ -0.46
UBE2N-205ENST00000550657 E9PCH4 1651 aa12.18□□□□□ -0.46
UBE2N-205ENST00000550657 PAK3O75914 559 aaPredicted RBP12.17□□□□□ -0.46
UBE2N-205ENST00000550657 NBR1Q14596 966 aa12.17□□□□□ -0.46
UBE2N-205ENST00000550657 MAGI2Q86UL8 1455 aa12.17□□□□□ -0.46
UBE2N-205ENST00000550657 ATP10AO60312 1499 aa12.17□□□□□ -0.46
UBE2N-205ENST00000550657 ANP32AP39687 249 aaKnown RBP12.17□□□□□ -0.46
UBE2N-205ENST00000550657 CDCA8Q53HL2 280 aa12.16□□□□□ -0.46
UBE2N-205ENST00000550657 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
UBE2N-205ENST00000550657 ADGRF5Q8IZF2 1346 aa12.16□□□□□ -0.46
UBE2N-205ENST00000550657 FANCAO15360 1455 aa12.16□□□□□ -0.46
UBE2N-205ENST00000550657 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
UBE2N-205ENST00000550657 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
UBE2N-205ENST00000550657 EIF2AK4Q9P2K8 1649 aaKnown RBP12.15□□□□□ -0.46
UBE2N-205ENST00000550657 GGT6Q6P531 493 aa12.15□□□□□ -0.46
UBE2N-205ENST00000550657 C20orf194Q5TEA3 1177 aa12.15□□□□□ -0.46
UBE2N-205ENST00000550657 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
UBE2N-205ENST00000550657 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
UBE2N-205ENST00000550657 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
UBE2N-205ENST00000550657 NUTM2DQ5VT03 806 aaPredicted RBP12.13□□□□□ -0.47
UBE2N-205ENST00000550657 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
UBE2N-205ENST00000550657 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
UBE2N-205ENST00000550657 UGGT1Q9NYU2 1555 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms