RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
VDR-208ENST00000550325 SEC24BO95487 1268 aa15.6■□□□□ 0.09
VDR-208ENST00000550325 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
VDR-208ENST00000550325 PANK3Q9H999 370 aa15.59■□□□□ 0.09
VDR-208ENST00000550325 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.09
VDR-208ENST00000550325 CFDP1Q9UEE9 299 aaPredicted RBP15.58■□□□□ 0.08
VDR-208ENST00000550325 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
VDR-208ENST00000550325 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
VDR-208ENST00000550325 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
VDR-208ENST00000550325 BCAR3O75815 825 aa15.56■□□□□ 0.08
VDR-208ENST00000550325 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
VDR-208ENST00000550325 DAPK1P53355 1430 aa15.55■□□□□ 0.08
VDR-208ENST00000550325 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
VDR-208ENST00000550325 CDK13Q14004 1512 aaKnown RBP15.55■□□□□ 0.08
VDR-208ENST00000550325 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
VDR-208ENST00000550325 GCC2Q8IWJ2 1684 aa15.54■□□□□ 0.08
VDR-208ENST00000550325 NUP155O75694 1391 aa15.54■□□□□ 0.08
VDR-208ENST00000550325 TRIM44Q96DX7 344 aaPredicted RBP15.53■□□□□ 0.08
VDR-208ENST00000550325 IGHDP01880 384 aa15.53■□□□□ 0.08
VDR-208ENST00000550325 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
VDR-208ENST00000550325 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
VDR-208ENST00000550325 ABCC5O15440 1437 aa15.52■□□□□ 0.07
VDR-208ENST00000550325 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
VDR-208ENST00000550325 NEUROD2Q15784 382 aa15.5■□□□□ 0.07
VDR-208ENST00000550325 KIAA1107Q9UPP5 1409 aa15.5■□□□□ 0.07
VDR-208ENST00000550325 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
VDR-208ENST00000550325 PANK1Q8TE04 598 aa15.5■□□□□ 0.07
VDR-208ENST00000550325 MYH16Q9H6N6 1097 aa15.5■□□□□ 0.07
VDR-208ENST00000550325 ARID3AQ99856 593 aa15.49■□□□□ 0.07
VDR-208ENST00000550325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.49■□□□□ 0.07
VDR-208ENST00000550325 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
VDR-208ENST00000550325 POLA1P09884 1462 aaPredicted RBP15.48■□□□□ 0.07
VDR-208ENST00000550325 PARD3Q8TEW0 1356 aa15.48■□□□□ 0.07
VDR-208ENST00000550325 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
VDR-208ENST00000550325 RRP9O43818 475 aaKnown RBP15.48■□□□□ 0.07
VDR-208ENST00000550325 APAF1O14727 1248 aa15.47■□□□□ 0.07
VDR-208ENST00000550325 TRAK2O60296 914 aa15.47■□□□□ 0.07
VDR-208ENST00000550325 TBC1D2Q9BYX2 928 aa15.47■□□□□ 0.07
VDR-208ENST00000550325 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.07
VDR-208ENST00000550325 CTTNBP2Q8WZ74 1663 aa15.46■□□□□ 0.07
VDR-208ENST00000550325 CLCN1P35523 988 aa15.46■□□□□ 0.07
VDR-208ENST00000550325 EPRSP07814 1512 aaKnown RBP15.46■□□□□ 0.06
VDR-208ENST00000550325 PER1O15534 1290 aaPredicted RBP15.46■□□□□ 0.06
VDR-208ENST00000550325 MCM4P33991 863 aa15.46■□□□□ 0.06
VDR-208ENST00000550325 MFAP1P55081 439 aaKnown RBP15.46■□□□□ 0.06
VDR-208ENST00000550325 POLR1AO95602 1720 aaPredicted RBP15.46■□□□□ 0.06
VDR-208ENST00000550325 KDM5CP41229 1560 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 CLUAP1Q96AJ1 413 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 USP19O94966 1318 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 ROCK1Q13464 1354 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 PZPP20742 1482 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 BCL2L13Q9BXK5 485 aa15.45■□□□□ 0.06
VDR-208ENST00000550325 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
VDR-208ENST00000550325 TMF1P82094 1093 aa15.43■□□□□ 0.06
VDR-208ENST00000550325 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
VDR-208ENST00000550325 ESPNB1AK53 854 aa15.43■□□□□ 0.06
VDR-208ENST00000550325 THOC2Q8NI27 1593 aaKnown RBP15.42■□□□□ 0.06
VDR-208ENST00000550325 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
VDR-208ENST00000550325 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
VDR-208ENST00000550325 TSPY4P0CV99 314 aa15.41■□□□□ 0.06
VDR-208ENST00000550325 TSPY10P0CW01 314 aa15.41■□□□□ 0.06
VDR-208ENST00000550325 PPP2R1AP30153 589 aa15.41■□□□□ 0.06
VDR-208ENST00000550325 MRE11P49959 708 aa15.41■□□□□ 0.06
VDR-208ENST00000550325 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
VDR-208ENST00000550325 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
VDR-208ENST00000550325 GRPEL1Q9HAV7 217 aa15.4■□□□□ 0.06
VDR-208ENST00000550325 ANKRD30AQ9BXX3 1397 aa15.4■□□□□ 0.06
VDR-208ENST00000550325 DISP3Q9P2K9 1392 aa15.4■□□□□ 0.06
VDR-208ENST00000550325 RBM10P98175 930 aaKnown RBP15.39■□□□□ 0.05
VDR-208ENST00000550325 ARHGEF11O15085 1522 aa15.39■□□□□ 0.05
VDR-208ENST00000550325 KIF14Q15058 1648 aa15.39■□□□□ 0.05
VDR-208ENST00000550325 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
VDR-208ENST00000550325 MBD5Q9P267 1494 aa15.38■□□□□ 0.05
VDR-208ENST00000550325 ANTXR1Q9H6X2 564 aa15.38■□□□□ 0.05
VDR-208ENST00000550325 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
VDR-208ENST00000550325 CENPJQ9HC77 1338 aaPredicted RBP15.38■□□□□ 0.05
VDR-208ENST00000550325 RRP7AQ9Y3A4 280 aaKnown RBP15.38■□□□□ 0.05
VDR-208ENST00000550325 ANKRD50Q9ULJ7 1429 aa15.38■□□□□ 0.05
VDR-208ENST00000550325 CUL7Q14999 1698 aa15.37■□□□□ 0.05
VDR-208ENST00000550325 CHMP5Q9NZZ3 219 aa15.37■□□□□ 0.05
VDR-208ENST00000550325 HSCBQ8IWL3 235 aa15.37■□□□□ 0.05
VDR-208ENST00000550325 PDZRN3Q9UPQ7 1066 aa15.37■□□□□ 0.05
VDR-208ENST00000550325 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
VDR-208ENST00000550325 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
VDR-208ENST00000550325 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
VDR-208ENST00000550325 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
VDR-208ENST00000550325 ERBB4Q15303 1308 aa15.35■□□□□ 0.05
VDR-208ENST00000550325 TBC1D32Q96NH3 1257 aa15.35■□□□□ 0.05
VDR-208ENST00000550325 ZMYM4Q5VZL5 1548 aa15.35■□□□□ 0.05
VDR-208ENST00000550325 DMRT2Q9Y5R5 561 aa15.35■□□□□ 0.05
VDR-208ENST00000550325 TNNQ9UQP3 1299 aa15.35■□□□□ 0.05
VDR-208ENST00000550325 SAMD9Q5K651 1589 aa15.34■□□□□ 0.05
VDR-208ENST00000550325 C22orf23Q9BZE7 217 aa15.34■□□□□ 0.05
VDR-208ENST00000550325 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
VDR-208ENST00000550325 FSD2A1L4K1 749 aa15.34■□□□□ 0.05
VDR-208ENST00000550325 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
VDR-208ENST00000550325 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
VDR-208ENST00000550325 ANP32BQ92688 251 aaKnown RBP15.34■□□□□ 0.05
VDR-208ENST00000550325 FAM13BQ9NYF5 915 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms