RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 POLR3EQ9NVU0 708 aa6.52□□□□□ -1.37
APAF1-208ENST00000549007 G3V3G9 751 aa6.52□□□□□ -1.37
APAF1-208ENST00000549007 PROCA1Q8NCQ7 364 aaPredicted RBP6.52□□□□□ -1.37
APAF1-208ENST00000549007 ZNF777Q9ULD5 760 aaPredicted RBP6.52□□□□□ -1.37
APAF1-208ENST00000549007 EIF4G1Q04637 1599 aaKnown RBP6.52□□□□□ -1.37
APAF1-208ENST00000549007 OCEL1Q9H607 264 aa6.51□□□□□ -1.37
APAF1-208ENST00000549007 COLQQ9Y215 455 aaPredicted RBP6.51□□□□□ -1.37
APAF1-208ENST00000549007 MAP3K7O43318 606 aa6.51□□□□□ -1.37
APAF1-208ENST00000549007 MCM6Q14566 821 aa6.5□□□□□ -1.37
APAF1-208ENST00000549007 NPDC1Q9NQX5 325 aaPredicted RBP6.5□□□□□ -1.37
APAF1-208ENST00000549007 ATMINO43313 823 aaPredicted RBP6.49□□□□□ -1.37
APAF1-208ENST00000549007 MROH2BQ7Z745 1585 aa6.49□□□□□ -1.37
APAF1-208ENST00000549007 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
APAF1-208ENST00000549007 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
APAF1-208ENST00000549007 PLCG2P16885 1265 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 FLIIQ13045 1269 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 FBXO31Q5XUX0 539 aaPredicted RBP6.48□□□□□ -1.37
APAF1-208ENST00000549007 CC2D2AQ9P2K1 1620 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 HAX1O00165 279 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 TRAK2O60296 914 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 TBC1D12O60347 775 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 BEGAINQ9BUH8 593 aa6.48□□□□□ -1.37
APAF1-208ENST00000549007 PELP1Q8IZL8 1130 aaKnown RBP6.47□□□□□ -1.37
APAF1-208ENST00000549007 SMARCA4P51532 1647 aa6.47□□□□□ -1.37
APAF1-208ENST00000549007 SSTR3P32745 418 aaPredicted RBP6.46□□□□□ -1.38
APAF1-208ENST00000549007 PTGER2P43116 358 aa6.46□□□□□ -1.38
APAF1-208ENST00000549007 BAZ1AQ9NRL2 1556 aaPredicted RBP6.46□□□□□ -1.38
APAF1-208ENST00000549007 EN1Q05925 392 aaPredicted RBP6.44□□□□□ -1.38
APAF1-208ENST00000549007 GPCPD1Q9NPB8 672 aa6.44□□□□□ -1.38
APAF1-208ENST00000549007 PCDHGA10Q9Y5H3 936 aa6.44□□□□□ -1.38
APAF1-208ENST00000549007 SEC24BO95487 1268 aa6.44□□□□□ -1.38
APAF1-208ENST00000549007 ASTLQ6HA08 431 aaPredicted RBP6.44□□□□□ -1.38
APAF1-208ENST00000549007 RSF1Q96T23 1441 aaPredicted RBP6.43□□□□□ -1.38
APAF1-208ENST00000549007 SH3D19Q5HYK7 790 aa6.43□□□□□ -1.38
APAF1-208ENST00000549007 SNRKQ9NRH2 765 aa6.43□□□□□ -1.38
APAF1-208ENST00000549007 PDIA4P13667 645 aaKnown RBP6.42□□□□□ -1.38
APAF1-208ENST00000549007 CLCN1P35523 988 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 GOPCQ9HD26 462 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 PROSER2Q86WR7 435 aaPredicted RBP6.42□□□□□ -1.38
APAF1-208ENST00000549007 TMUB1Q9BVT8 246 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 WIZO95785 1651 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 ATAD2BQ9ULI0 1458 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 POTEFA5A3E0 1075 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 PADI6Q6TGC4 694 aa6.42□□□□□ -1.38
APAF1-208ENST00000549007 NPM2Q86SE8 214 aaKnown RBP6.42□□□□□ -1.38
APAF1-208ENST00000549007 METTL3Q86U44 580 aaKnown RBP6.42□□□□□ -1.38
APAF1-208ENST00000549007 CSPP1Q1MSJ5 1256 aa6.41□□□□□ -1.38
APAF1-208ENST00000549007 MYSM1Q5VVJ2 828 aa6.41□□□□□ -1.38
APAF1-208ENST00000549007 A6NJR5 290 aa6.4□□□□□ -1.38
APAF1-208ENST00000549007 RANGAP1P46060 587 aaPredicted RBP6.4□□□□□ -1.38
APAF1-208ENST00000549007 FAM217BQ9NTX9 383 aaPredicted RBP6.4□□□□□ -1.38
APAF1-208ENST00000549007 PTCD2Q8WV60 388 aaKnown RBP6.4□□□□□ -1.39
APAF1-208ENST00000549007 SKIV2LQ15477 1246 aaKnown RBP6.39□□□□□ -1.39
APAF1-208ENST00000549007 SLAIN1Q8ND83 568 aa6.39□□□□□ -1.39
APAF1-208ENST00000549007 KHSRPQ92945 711 aaKnown RBP eCLIP6.39□□□□□ -1.399e-8■■■□□ 18.1
APAF1-208ENST00000549007 L3MBTL3Q96JM7 780 aaPredicted RBP6.39□□□□□ -1.39
APAF1-208ENST00000549007 LIMD1Q9UGP4 676 aa6.39□□□□□ -1.39
APAF1-208ENST00000549007 IER5LQ5T953 404 aa6.38□□□□□ -1.39
APAF1-208ENST00000549007 COG6Q9Y2V7 657 aa6.38□□□□□ -1.39
APAF1-208ENST00000549007 AEBP1Q8IUX7 1158 aa6.38□□□□□ -1.39
APAF1-208ENST00000549007 FNBP4Q8N3X1 1017 aaPredicted RBP6.38□□□□□ -1.39
APAF1-208ENST00000549007 SMARCA2P51531 1590 aa6.38□□□□□ -1.39
APAF1-208ENST00000549007 BAZ1BQ9UIG0 1483 aaKnown RBP6.38□□□□□ -1.39
APAF1-208ENST00000549007 C3orf67Q6ZVT6 689 aa6.38□□□□□ -1.39
APAF1-208ENST00000549007 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.37□□□□□ -1.39
APAF1-208ENST00000549007 GDPD2Q9HCC8 539 aa6.37□□□□□ -1.39
APAF1-208ENST00000549007 ANO8Q9HCE9 1232 aaPredicted RBP6.37□□□□□ -1.39
APAF1-208ENST00000549007 NCAPD3P42695 1498 aa6.37□□□□□ -1.39
APAF1-208ENST00000549007 PHF14O94880 888 aa6.37□□□□□ -1.39
APAF1-208ENST00000549007 CLK2P49760 499 aaKnown RBP6.37□□□□□ -1.39
APAF1-208ENST00000549007 TBC1D2Q9BYX2 928 aa6.37□□□□□ -1.39
APAF1-208ENST00000549007 RAD21O60216 631 aa6.36□□□□□ -1.39
APAF1-208ENST00000549007 PXYLP1Q8TE99 480 aa6.36□□□□□ -1.39
APAF1-208ENST00000549007 ZBTB7CA1YPR0 619 aa6.35□□□□□ -1.39
APAF1-208ENST00000549007 RFC5P40937 340 aa6.35□□□□□ -1.39
APAF1-208ENST00000549007 ADGRG1Q9Y653 693 aa6.35□□□□□ -1.39
APAF1-208ENST00000549007 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
APAF1-208ENST00000549007 PEG3Q9GZU2 1588 aa6.35□□□□□ -1.39
APAF1-208ENST00000549007 C3orf80F5H4A9 247 aa6.35□□□□□ -1.39
APAF1-208ENST00000549007 PCDHGA4Q9Y5G9 962 aa6.35□□□□□ -1.39
APAF1-208ENST00000549007 QPCTQ16769 361 aa6.34□□□□□ -1.39
APAF1-208ENST00000549007 ZNF454Q8N9F8 522 aa6.34□□□□□ -1.39
APAF1-208ENST00000549007 POM121CA8CG34 1229 aa6.34□□□□□ -1.39
APAF1-208ENST00000549007 RETREG2Q8NC44 543 aa6.34□□□□□ -1.39
APAF1-208ENST00000549007 ZNF330Q9Y3S2 320 aaPredicted RBP6.34□□□□□ -1.39
APAF1-208ENST00000549007 NUDT7P0C024 238 aa6.34□□□□□ -1.4
APAF1-208ENST00000549007 C6orf132Q5T0Z8 1188 aa6.34□□□□□ -1.4
APAF1-208ENST00000549007 HMGXB3Q12766 1538 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 MTMR14Q8NCE2 650 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 CARNS1A5YM72 827 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 TYW1BQ6NUM6 668 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 DCBLD2Q96PD2 775 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 ADAM33Q9BZ11 813 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 PLSCR2Q9NRY7 297 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 FAM198AQ9UFP1 575 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 GABBR2O75899 941 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 ABL2P42684 1182 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 EPAS1Q99814 870 aa6.33□□□□□ -1.4
APAF1-208ENST00000549007 KCTD17Q8N5Z5 321 aa6.32□□□□□ -1.4
APAF1-208ENST00000549007 METRNQ9UJH8 293 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms