RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 PPP1R15BQ5SWA1 713 aa14.35□□□□□ -0.11
SLC38A1-205ENST00000548979 CDAN1Q8IWY9 1227 aa14.35□□□□□ -0.11
SLC38A1-205ENST00000548979 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.11
SLC38A1-205ENST00000548979 PBRM1Q86U86 1689 aa14.34□□□□□ -0.11
SLC38A1-205ENST00000548979 MFSD10Q14728 455 aa14.34□□□□□ -0.11
SLC38A1-205ENST00000548979 ZNF710Q8N1W2 664 aa14.33□□□□□ -0.12
SLC38A1-205ENST00000548979 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
SLC38A1-205ENST00000548979 GPR153Q6NV75 609 aa14.32□□□□□ -0.12
SLC38A1-205ENST00000548979 DDX27Q96GQ7 796 aaKnown RBP14.32□□□□□ -0.12
SLC38A1-205ENST00000548979 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
SLC38A1-205ENST00000548979 ARSIQ5FYB1 569 aa14.31□□□□□ -0.12
SLC38A1-205ENST00000548979 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
SLC38A1-205ENST00000548979 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
SLC38A1-205ENST00000548979 SLC34A2O95436 690 aa14.28□□□□□ -0.12
SLC38A1-205ENST00000548979 HOXB1P14653 301 aaPredicted RBP14.28□□□□□ -0.12
SLC38A1-205ENST00000548979 GRIN2AQ12879 1464 aa14.27□□□□□ -0.12
SLC38A1-205ENST00000548979 PCDHGA4Q9Y5G9 962 aa14.26□□□□□ -0.13
SLC38A1-205ENST00000548979 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
SLC38A1-205ENST00000548979 ADAMTS12P58397 1594 aa14.25□□□□□ -0.13
SLC38A1-205ENST00000548979 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
SLC38A1-205ENST00000548979 UPF1Q92900 1129 aaKnown RBP eCLIP14.24□□□□□ -0.13
SLC38A1-205ENST00000548979 ZSWIM6Q9HCJ5 1215 aa14.24□□□□□ -0.13
SLC38A1-205ENST00000548979 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
SLC38A1-205ENST00000548979 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
SLC38A1-205ENST00000548979 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
SLC38A1-205ENST00000548979 PTCD2Q8WV60 388 aaKnown RBP14.23□□□□□ -0.13
SLC38A1-205ENST00000548979 EMILIN3Q9NT22 766 aa14.23□□□□□ -0.13
SLC38A1-205ENST00000548979 NUP160Q12769 1436 aa14.23□□□□□ -0.13
SLC38A1-205ENST00000548979 EMP3P54852 163 aa14.21□□□□□ -0.13
SLC38A1-205ENST00000548979 OXER1Q8TDS5 423 aa14.21□□□□□ -0.13
SLC38A1-205ENST00000548979 NUDT7P0C024 238 aa14.2□□□□□ -0.14
SLC38A1-205ENST00000548979 HAP1P54257 671 aaPredicted RBP14.19□□□□□ -0.14
SLC38A1-205ENST00000548979 IGF1RP08069 1367 aa14.19□□□□□ -0.14
SLC38A1-205ENST00000548979 KDM4FA0A1W2PPD8 638 aa14.17□□□□□ -0.14
SLC38A1-205ENST00000548979 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
SLC38A1-205ENST00000548979 CAMK2BQ13554 666 aa14.16□□□□□ -0.14
SLC38A1-205ENST00000548979 CEP170Q5SW79 1584 aa14.16□□□□□ -0.14
SLC38A1-205ENST00000548979 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
SLC38A1-205ENST00000548979 HS3ST6Q96QI5 342 aa14.13□□□□□ -0.15
SLC38A1-205ENST00000548979 CUL7Q14999 1698 aa14.12□□□□□ -0.15
SLC38A1-205ENST00000548979 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
SLC38A1-205ENST00000548979 LHX6Q9UPM6 363 aa14.11□□□□□ -0.15
SLC38A1-205ENST00000548979 ERBB3P21860 1342 aa14.11□□□□□ -0.15
SLC38A1-205ENST00000548979 WDR70Q9NW82 654 aa14.1□□□□□ -0.15
SLC38A1-205ENST00000548979 SHROOM2Q13796 1616 aa14.09□□□□□ -0.15
SLC38A1-205ENST00000548979 VARS2Q5ST30 1063 aaKnown RBP14.09□□□□□ -0.15
SLC38A1-205ENST00000548979 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
SLC38A1-205ENST00000548979 PRG4Q92954 1404 aaPredicted RBP14.08□□□□□ -0.15
SLC38A1-205ENST00000548979 ZNF316A6NFI3 1004 aaPredicted RBP14.08□□□□□ -0.16
SLC38A1-205ENST00000548979 E2F4Q16254 413 aa14.08□□□□□ -0.16
SLC38A1-205ENST00000548979 KIAA0586Q9BVV6 1533 aa14.08□□□□□ -0.16
SLC38A1-205ENST00000548979 DPYSL4O14531 572 aa14.07□□□□□ -0.16
SLC38A1-205ENST00000548979 TBC1D12O60347 775 aa14.07□□□□□ -0.16
SLC38A1-205ENST00000548979 MAP3K9P80192 1104 aa14.05□□□□□ -0.16
SLC38A1-205ENST00000548979 EVI5O60447 810 aa14.04□□□□□ -0.16
SLC38A1-205ENST00000548979 RUSC2Q8N2Y8 1516 aa14.03□□□□□ -0.16
SLC38A1-205ENST00000548979 ERCC6L2Q5T890 1561 aa14.02□□□□□ -0.16
SLC38A1-205ENST00000548979 MMRN1Q13201 1228 aa14.02□□□□□ -0.17
SLC38A1-205ENST00000548979 SPNS2Q8IVW8 549 aa14.02□□□□□ -0.17
SLC38A1-205ENST00000548979 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
SLC38A1-205ENST00000548979 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
SLC38A1-205ENST00000548979 ANO8Q9HCE9 1232 aaPredicted RBP13.99□□□□□ -0.17
SLC38A1-205ENST00000548979 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
SLC38A1-205ENST00000548979 KRTAP3-3Q9BYR6 98 aa13.96□□□□□ -0.17
SLC38A1-205ENST00000548979 KRTAP3-2Q9BYR7 98 aa13.96□□□□□ -0.17
SLC38A1-205ENST00000548979 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
SLC38A1-205ENST00000548979 ZNF687Q8N1G0 1237 aa13.94□□□□□ -0.18
SLC38A1-205ENST00000548979 PTPRGP23470 1445 aa13.93□□□□□ -0.18
SLC38A1-205ENST00000548979 ARIH1Q9Y4X5 557 aaPredicted RBP13.93□□□□□ -0.18
SLC38A1-205ENST00000548979 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
SLC38A1-205ENST00000548979 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
SLC38A1-205ENST00000548979 PDIA6Q15084 440 aa13.9□□□□□ -0.18
SLC38A1-205ENST00000548979 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
SLC38A1-205ENST00000548979 AXIN2Q9Y2T1 843 aa13.9□□□□□ -0.18
SLC38A1-205ENST00000548979 FOSBP53539 338 aa13.89□□□□□ -0.19
SLC38A1-205ENST00000548979 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
SLC38A1-205ENST00000548979 EEA1Q15075 1411 aa13.88□□□□□ -0.19
SLC38A1-205ENST00000548979 PRXQ9BXM0 1461 aa13.87□□□□□ -0.19
SLC38A1-205ENST00000548979 FAM9AQ8IZU1 332 aaPredicted RBP13.87□□□□□ -0.19
SLC38A1-205ENST00000548979 DDX12PQ92771 950 aa13.87□□□□□ -0.19
SLC38A1-205ENST00000548979 UGGT2Q9NYU1 1516 aa13.86□□□□□ -0.19
SLC38A1-205ENST00000548979 PCDHGA10Q9Y5H3 936 aa13.86□□□□□ -0.19
SLC38A1-205ENST00000548979 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
SLC38A1-205ENST00000548979 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
SLC38A1-205ENST00000548979 ARHGEF1Q92888 912 aaKnown RBP13.84□□□□□ -0.19
SLC38A1-205ENST00000548979 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
SLC38A1-205ENST00000548979 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
SLC38A1-205ENST00000548979 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
SLC38A1-205ENST00000548979 DISP1Q96F81 1524 aa13.82□□□□□ -0.2
SLC38A1-205ENST00000548979 SPDYE16A6NNV3 312 aaPredicted RBP13.82□□□□□ -0.2
SLC38A1-205ENST00000548979 PSEN2P49810 448 aa13.82□□□□□ -0.2
SLC38A1-205ENST00000548979 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
SLC38A1-205ENST00000548979 ADAM33Q9BZ11 813 aa13.82□□□□□ -0.2
SLC38A1-205ENST00000548979 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
SLC38A1-205ENST00000548979 UACAQ9BZF9 1416 aa13.81□□□□□ -0.2
SLC38A1-205ENST00000548979 UHRF1BP1LA0JNW5 1464 aa13.81□□□□□ -0.2
SLC38A1-205ENST00000548979 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
SLC38A1-205ENST00000548979 PTGER2P43116 358 aa13.81□□□□□ -0.2
SLC38A1-205ENST00000548979 PRIM1P49642 420 aaKnown RBP13.8□□□□□ -0.2
SLC38A1-205ENST00000548979 ABCC2Q92887 1545 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms