RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 WDR70Q9NW82 654 aa12□□□□□ -0.49
CNOT2-216ENST00000548939 GOLGA8CPA6NN73 597 aa11.99□□□□□ -0.49
CNOT2-216ENST00000548939 COL9A1P20849 921 aa11.99□□□□□ -0.49
CNOT2-216ENST00000548939 DDX12PQ92771 950 aa11.99□□□□□ -0.49
CNOT2-216ENST00000548939 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
CNOT2-216ENST00000548939 E2F4Q16254 413 aa11.98□□□□□ -0.49
CNOT2-216ENST00000548939 PLA2G2EQ9NZK7 142 aa11.98□□□□□ -0.49
CNOT2-216ENST00000548939 PDIA6Q15084 440 aa11.97□□□□□ -0.49
CNOT2-216ENST00000548939 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
CNOT2-216ENST00000548939 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
CNOT2-216ENST00000548939 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
CNOT2-216ENST00000548939 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
CNOT2-216ENST00000548939 PTPN5P54829 565 aa11.95□□□□□ -0.5
CNOT2-216ENST00000548939 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
CNOT2-216ENST00000548939 WNT2BQ93097 391 aa11.94□□□□□ -0.5
CNOT2-216ENST00000548939 THSD4Q6ZMP0 1018 aa11.93□□□□□ -0.5
CNOT2-216ENST00000548939 NBR1Q14596 966 aa11.92□□□□□ -0.5
CNOT2-216ENST00000548939 KIAA1468Q9P260 1216 aa11.89□□□□□ -0.51
CNOT2-216ENST00000548939 ARIH1Q9Y4X5 557 aaPredicted RBP11.89□□□□□ -0.51
CNOT2-216ENST00000548939 MAP3K7O43318 606 aa11.88□□□□□ -0.51
CNOT2-216ENST00000548939 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-216ENST00000548939 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
CNOT2-216ENST00000548939 LAPTM4BQ86VI4 370 aa11.86□□□□□ -0.51
CNOT2-216ENST00000548939 ANKK1Q8NFD2 765 aa11.86□□□□□ -0.51
CNOT2-216ENST00000548939 TRIM6-TRIM34B2RNG4 842 aa11.85□□□□□ -0.51
CNOT2-216ENST00000548939 TSR1Q2NL82 804 aaKnown RBP11.85□□□□□ -0.51
CNOT2-216ENST00000548939 GRXCR2A6NFK2 248 aa11.84□□□□□ -0.51
CNOT2-216ENST00000548939 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
CNOT2-216ENST00000548939 SEPT9Q9UHD8 586 aaPredicted RBP11.82□□□□□ -0.52
CNOT2-216ENST00000548939 ZFRQ96KR1 1074 aaKnown RBP11.81□□□□□ -0.52
CNOT2-216ENST00000548939 BCAMP50895 628 aa11.79□□□□□ -0.52
CNOT2-216ENST00000548939 PRIM1P49642 420 aaKnown RBP11.78□□□□□ -0.52
CNOT2-216ENST00000548939 PACS2Q86VP3 889 aa11.78□□□□□ -0.52
CNOT2-216ENST00000548939 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
CNOT2-216ENST00000548939 FAM98CQ17RN3 349 aaKnown RBP11.77□□□□□ -0.53
CNOT2-216ENST00000548939 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
CNOT2-216ENST00000548939 OSBPP22059 807 aa11.76□□□□□ -0.53
CNOT2-216ENST00000548939 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
CNOT2-216ENST00000548939 PRSS12P56730 875 aa11.74□□□□□ -0.53
CNOT2-216ENST00000548939 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
CNOT2-216ENST00000548939 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
CNOT2-216ENST00000548939 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
CNOT2-216ENST00000548939 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
CNOT2-216ENST00000548939 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
CNOT2-216ENST00000548939 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.71□□□□□ -0.53
CNOT2-216ENST00000548939 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
CNOT2-216ENST00000548939 WBP1LQ9NX94 342 aa11.7□□□□□ -0.54
CNOT2-216ENST00000548939 KCNV2Q8TDN2 545 aa11.69□□□□□ -0.54
CNOT2-216ENST00000548939 FAM198AQ9UFP1 575 aa11.69□□□□□ -0.54
CNOT2-216ENST00000548939 SMAPO00193 183 aa11.68□□□□□ -0.54
CNOT2-216ENST00000548939 NBPF26B4DH59 902 aa11.67□□□□□ -0.54
CNOT2-216ENST00000548939 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
CNOT2-216ENST00000548939 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
CNOT2-216ENST00000548939 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
CNOT2-216ENST00000548939 TATDN2Q93075 761 aa11.65□□□□□ -0.54
CNOT2-216ENST00000548939 RBM27Q9P2N5 1060 aaKnown RBP11.65□□□□□ -0.54
CNOT2-216ENST00000548939 A0A0G2JS52 829 aa11.64□□□□□ -0.55
CNOT2-216ENST00000548939 ITGBL1O95965 494 aaPredicted RBP11.64□□□□□ -0.55
CNOT2-216ENST00000548939 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
CNOT2-216ENST00000548939 MLLT3P42568 568 aaPredicted RBP11.63□□□□□ -0.55
CNOT2-216ENST00000548939 SAMD7Q7Z3H4 446 aa11.62□□□□□ -0.55
CNOT2-216ENST00000548939 PPP4CP60510 307 aa11.61□□□□□ -0.55
CNOT2-216ENST00000548939 NUDT18Q6ZVK8 323 aa11.61□□□□□ -0.55
CNOT2-216ENST00000548939 NPDC1Q9NQX5 325 aaPredicted RBP11.61□□□□□ -0.55
CNOT2-216ENST00000548939 P3H3Q8IVL6 736 aa11.6□□□□□ -0.55
CNOT2-216ENST00000548939 RGS20O76081 388 aa11.59□□□□□ -0.55
CNOT2-216ENST00000548939 PADI6Q6TGC4 694 aa11.59□□□□□ -0.55
CNOT2-216ENST00000548939 KCNC4Q03721 635 aa11.58□□□□□ -0.56
CNOT2-216ENST00000548939 TTC13Q8NBP0 860 aa11.58□□□□□ -0.56
CNOT2-216ENST00000548939 HDGFP51858 240 aaKnown RBP11.57□□□□□ -0.56
CNOT2-216ENST00000548939 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
CNOT2-216ENST00000548939 RNF40O75150 1001 aa11.54□□□□□ -0.56
CNOT2-216ENST00000548939 SEMA3EO15041 775 aa11.5□□□□□ -0.57
CNOT2-216ENST00000548939 PTGDRQ13258 359 aa11.5□□□□□ -0.57
CNOT2-216ENST00000548939 NUTM2FA1L443 756 aa11.49□□□□□ -0.57
CNOT2-216ENST00000548939 SWT1Q5T5J6 900 aaKnown RBP11.49□□□□□ -0.57
CNOT2-216ENST00000548939 EYA1Q99502 592 aa11.48□□□□□ -0.57
CNOT2-216ENST00000548939 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
CNOT2-216ENST00000548939 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
CNOT2-216ENST00000548939 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
CNOT2-216ENST00000548939 SLC4A3P48751 1232 aa11.45□□□□□ -0.58
CNOT2-216ENST00000548939 MTRQ99707 1265 aa11.45□□□□□ -0.58
CNOT2-216ENST00000548939 APLP1P51693 650 aa11.44□□□□□ -0.58
CNOT2-216ENST00000548939 IRX2Q9BZI1 471 aaPredicted RBP11.43□□□□□ -0.58
CNOT2-216ENST00000548939 IL21Q9HBE4 155 aa11.43□□□□□ -0.58
CNOT2-216ENST00000548939 FCHSD2O94868 740 aa11.42□□□□□ -0.58
CNOT2-216ENST00000548939 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
CNOT2-216ENST00000548939 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
CNOT2-216ENST00000548939 ADGRG1Q9Y653 693 aa11.41□□□□□ -0.58
CNOT2-216ENST00000548939 DNAJB2P25686 324 aa11.4□□□□□ -0.58
CNOT2-216ENST00000548939 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
CNOT2-216ENST00000548939 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
CNOT2-216ENST00000548939 ZNF516Q92618 1163 aa11.38□□□□□ -0.59
CNOT2-216ENST00000548939 SMYD5Q6GMV2 418 aa11.37□□□□□ -0.59
CNOT2-216ENST00000548939 PRR14Q9BWN1 585 aa11.36□□□□□ -0.59
CNOT2-216ENST00000548939 TMEM134Q9H6X4 195 aa11.36□□□□□ -0.59
CNOT2-216ENST00000548939 RCCD1A6NED2 376 aa11.35□□□□□ -0.59
CNOT2-216ENST00000548939 COPS2P61201 443 aa11.35□□□□□ -0.59
CNOT2-216ENST00000548939 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
CNOT2-216ENST00000548939 HIC1Q14526 733 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms