RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 RALGAPBQ86X10 1494 aa18.37■□□□□ 0.53
HDAC7-228ENST00000548938 ADGBQ8N7X0 1667 aa18.37■□□□□ 0.53
HDAC7-228ENST00000548938 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
HDAC7-228ENST00000548938 NPM2Q86SE8 214 aaKnown RBP18.36■□□□□ 0.53
HDAC7-228ENST00000548938 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
HDAC7-228ENST00000548938 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
HDAC7-228ENST00000548938 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
HDAC7-228ENST00000548938 BRD4O60885 1362 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-228ENST00000548938 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
HDAC7-228ENST00000548938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.34■□□□□ 0.534e-6■■■□□ 19
HDAC7-228ENST00000548938 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
HDAC7-228ENST00000548938 ADGRL2O95490 1459 aa18.33■□□□□ 0.53
HDAC7-228ENST00000548938 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
HDAC7-228ENST00000548938 HNRNPMP52272 730 aaKnown RBP eCLIP18.33■□□□□ 0.522e-6■■■□□ 16.7
HDAC7-228ENST00000548938 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
HDAC7-228ENST00000548938 PREX2Q70Z35 1606 aa18.32■□□□□ 0.52
HDAC7-228ENST00000548938 CDC42BPBQ9Y5S2 1711 aa18.32■□□□□ 0.52
HDAC7-228ENST00000548938 ST20-MTHFSA0A0A6YYL1 179 aa18.31■□□□□ 0.52
HDAC7-228ENST00000548938 RCAN3Q9UKA8 241 aa18.31■□□□□ 0.52
HDAC7-228ENST00000548938 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-228ENST00000548938 ANKRD30AQ9BXX3 1397 aa18.3■□□□□ 0.52
HDAC7-228ENST00000548938 TCERG1O14776 1098 aaKnown RBP18.3■□□□□ 0.52
HDAC7-228ENST00000548938 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
HDAC7-228ENST00000548938 SAMD9LQ8IVG5 1584 aa18.29■□□□□ 0.52
HDAC7-228ENST00000548938 ANKRD50Q9ULJ7 1429 aa18.29■□□□□ 0.52
HDAC7-228ENST00000548938 PDE4AP27815 886 aa18.29■□□□□ 0.52
HDAC7-228ENST00000548938 RALBP1Q15311 655 aa18.29■□□□□ 0.52
HDAC7-228ENST00000548938 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
HDAC7-228ENST00000548938 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
HDAC7-228ENST00000548938 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
HDAC7-228ENST00000548938 KDM2AQ9Y2K7 1162 aa18.28■□□□□ 0.52
HDAC7-228ENST00000548938 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
HDAC7-228ENST00000548938 E9PCH4 1651 aa18.28■□□□□ 0.52
HDAC7-228ENST00000548938 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
HDAC7-228ENST00000548938 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.52
HDAC7-228ENST00000548938 ARHGAP5Q13017 1502 aa18.27■□□□□ 0.52
HDAC7-228ENST00000548938 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
HDAC7-228ENST00000548938 NUP155O75694 1391 aa18.26■□□□□ 0.51
HDAC7-228ENST00000548938 BACH2Q9BYV9 841 aa18.25■□□□□ 0.51
HDAC7-228ENST00000548938 CCDC141Q6ZP82 1450 aa18.24■□□□□ 0.51
HDAC7-228ENST00000548938 RSPH4AQ5TD94 716 aa18.23■□□□□ 0.51
HDAC7-228ENST00000548938 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
HDAC7-228ENST00000548938 PLCH2O75038 1416 aa18.23■□□□□ 0.51
HDAC7-228ENST00000548938 NEFMP07197 916 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 DCAF11Q8TEB1 546 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 MYO5CQ9NQX4 1742 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 MS4A1P11836 297 aa18.22■□□□□ 0.51
HDAC7-228ENST00000548938 PARD3Q8TEW0 1356 aa18.21■□□□□ 0.51
HDAC7-228ENST00000548938 PDE3BQ13370 1112 aa18.2■□□□□ 0.5
HDAC7-228ENST00000548938 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
HDAC7-228ENST00000548938 WDR7Q9Y4E6 1490 aa18.19■□□□□ 0.5
HDAC7-228ENST00000548938 PLIN1O60240 522 aa18.19■□□□□ 0.5
HDAC7-228ENST00000548938 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
HDAC7-228ENST00000548938 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
HDAC7-228ENST00000548938 KDM5DQ9BY66 1539 aa18.17■□□□□ 0.5
HDAC7-228ENST00000548938 USP35Q9P2H5 1018 aa18.16■□□□□ 0.5
HDAC7-228ENST00000548938 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
HDAC7-228ENST00000548938 CRBNQ96SW2 442 aa18.14■□□□□ 0.5
HDAC7-228ENST00000548938 ASXL2Q76L83 1435 aa18.14■□□□□ 0.49
HDAC7-228ENST00000548938 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
HDAC7-228ENST00000548938 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-228ENST00000548938 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-228ENST00000548938 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
HDAC7-228ENST00000548938 BLMP54132 1417 aaPredicted RBP18.11■□□□□ 0.49
HDAC7-228ENST00000548938 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
HDAC7-228ENST00000548938 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
HDAC7-228ENST00000548938 TRPM1Q7Z4N2 1603 aa18.11■□□□□ 0.49
HDAC7-228ENST00000548938 ABCC1P33527 1531 aa18.1■□□□□ 0.49
HDAC7-228ENST00000548938 NBPF1Q3BBV0 1214 aa18.1■□□□□ 0.49
HDAC7-228ENST00000548938 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
HDAC7-228ENST00000548938 TRAPPC8Q9Y2L5 1435 aa18.09■□□□□ 0.49
HDAC7-228ENST00000548938 NPM1P06748 294 aaKnown RBP eCLIP18.09■□□□□ 0.49
HDAC7-228ENST00000548938 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
HDAC7-228ENST00000548938 COL17A1Q9UMD9 1497 aaPredicted RBP18.08■□□□□ 0.48
HDAC7-228ENST00000548938 C20orf194Q5TEA3 1177 aa18.07■□□□□ 0.48
HDAC7-228ENST00000548938 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
HDAC7-228ENST00000548938 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
HDAC7-228ENST00000548938 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
HDAC7-228ENST00000548938 FAM135AQ9P2D6 1515 aa18.06■□□□□ 0.48
HDAC7-228ENST00000548938 RGL3Q3MIN7 710 aa18.06■□□□□ 0.48
HDAC7-228ENST00000548938 PLXNC1O60486 1568 aa18.05■□□□□ 0.48
HDAC7-228ENST00000548938 AFAP1Q8N556 730 aa18.05■□□□□ 0.48
HDAC7-228ENST00000548938 FANCAO15360 1455 aa18.05■□□□□ 0.48
HDAC7-228ENST00000548938 INSRP06213 1382 aa18.04■□□□□ 0.48
HDAC7-228ENST00000548938 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
HDAC7-228ENST00000548938 ZMYM4Q5VZL5 1548 aa18.04■□□□□ 0.48
HDAC7-228ENST00000548938 TESK2Q96S53 571 aa18.04■□□□□ 0.48
HDAC7-228ENST00000548938 PANK3Q9H999 370 aa18.04■□□□□ 0.48
HDAC7-228ENST00000548938 SLC4A3P48751 1232 aa18.03■□□□□ 0.48
HDAC7-228ENST00000548938 GPRASP1Q5JY77 1395 aa18.03■□□□□ 0.48
HDAC7-228ENST00000548938 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
HDAC7-228ENST00000548938 A2MP01023 1474 aa18.01■□□□□ 0.47
HDAC7-228ENST00000548938 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
HDAC7-228ENST00000548938 PRDM15P57071 1507 aaPredicted RBP18.01■□□□□ 0.47
HDAC7-228ENST00000548938 DUOX2Q9NRD8 1548 aa18.01■□□□□ 0.47
HDAC7-228ENST00000548938 NFKBIBQ15653 356 aa18■□□□□ 0.47
HDAC7-228ENST00000548938 ERBINQ96RT1 1412 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms