RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 RABGEF1Q9UJ41 708 aa13.59□□□□□ -0.23
CNOT2-215ENST00000548863 COL9A1P20849 921 aa13.57□□□□□ -0.24
CNOT2-215ENST00000548863 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
CNOT2-215ENST00000548863 ONECUT3O60422 494 aaPredicted RBP13.55□□□□□ -0.24
CNOT2-215ENST00000548863 PDIA6Q15084 440 aa13.55□□□□□ -0.24
CNOT2-215ENST00000548863 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
CNOT2-215ENST00000548863 ARIH1Q9Y4X5 557 aaPredicted RBP13.55□□□□□ -0.24
CNOT2-215ENST00000548863 GOLGA8CPA6NN73 597 aa13.54□□□□□ -0.24
CNOT2-215ENST00000548863 WNT2BQ93097 391 aa13.54□□□□□ -0.24
CNOT2-215ENST00000548863 SPDYE16A6NNV3 312 aaPredicted RBP13.53□□□□□ -0.24
CNOT2-215ENST00000548863 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
CNOT2-215ENST00000548863 PTPN5P54829 565 aa13.52□□□□□ -0.25
CNOT2-215ENST00000548863 PROX2Q3B8N5 592 aa13.52□□□□□ -0.25
CNOT2-215ENST00000548863 E2F4Q16254 413 aa13.51□□□□□ -0.25
CNOT2-215ENST00000548863 LAPTM4BQ86VI4 370 aa13.51□□□□□ -0.25
CNOT2-215ENST00000548863 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
CNOT2-215ENST00000548863 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
CNOT2-215ENST00000548863 DDX12PQ92771 950 aa13.49□□□□□ -0.25
CNOT2-215ENST00000548863 WDR70Q9NW82 654 aa13.46□□□□□ -0.25
CNOT2-215ENST00000548863 EN1Q05925 392 aaPredicted RBP13.45□□□□□ -0.26
CNOT2-215ENST00000548863 KIAA1468Q9P260 1216 aa13.45□□□□□ -0.26
CNOT2-215ENST00000548863 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
CNOT2-215ENST00000548863 ANKK1Q8NFD2 765 aa13.43□□□□□ -0.26
CNOT2-215ENST00000548863 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
CNOT2-215ENST00000548863 NBR1Q14596 966 aa13.42□□□□□ -0.26
CNOT2-215ENST00000548863 ZFRQ96KR1 1074 aaKnown RBP13.4□□□□□ -0.26
CNOT2-215ENST00000548863 SOWAHBA6NEL2 793 aa13.39□□□□□ -0.27
CNOT2-215ENST00000548863 MAP3K7O43318 606 aa13.38□□□□□ -0.27
CNOT2-215ENST00000548863 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
CNOT2-215ENST00000548863 FAM98CQ17RN3 349 aaKnown RBP13.36□□□□□ -0.27
CNOT2-215ENST00000548863 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
CNOT2-215ENST00000548863 CERKQ8TCT0 537 aa13.35□□□□□ -0.27
CNOT2-215ENST00000548863 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
CNOT2-215ENST00000548863 SEPT9Q9UHD8 586 aaPredicted RBP13.33□□□□□ -0.28
CNOT2-215ENST00000548863 TSKSQ9UJT2 592 aa13.33□□□□□ -0.28
CNOT2-215ENST00000548863 RGS20O76081 388 aa13.32□□□□□ -0.28
CNOT2-215ENST00000548863 BCAMP50895 628 aa13.32□□□□□ -0.28
CNOT2-215ENST00000548863 ITGBL1O95965 494 aaPredicted RBP13.31□□□□□ -0.28
CNOT2-215ENST00000548863 OSBPP22059 807 aa13.3□□□□□ -0.28
CNOT2-215ENST00000548863 PRIM1P49642 420 aaKnown RBP13.3□□□□□ -0.28
CNOT2-215ENST00000548863 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
CNOT2-215ENST00000548863 PRSS12P56730 875 aa13.29□□□□□ -0.28
CNOT2-215ENST00000548863 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
CNOT2-215ENST00000548863 A0A0G2JS52 829 aa13.27□□□□□ -0.29
CNOT2-215ENST00000548863 WBP1LQ9NX94 342 aa13.26□□□□□ -0.29
CNOT2-215ENST00000548863 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.26□□□□□ -0.29
CNOT2-215ENST00000548863 LRCH3Q96II8 777 aa13.25□□□□□ -0.29
CNOT2-215ENST00000548863 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
CNOT2-215ENST00000548863 TSR3Q9UJK0 312 aaKnown RBP13.25□□□□□ -0.29
CNOT2-215ENST00000548863 ARHGEF1Q92888 912 aaKnown RBP13.23□□□□□ -0.29
CNOT2-215ENST00000548863 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
CNOT2-215ENST00000548863 FAM198AQ9UFP1 575 aa13.23□□□□□ -0.29
CNOT2-215ENST00000548863 TATDN2Q93075 761 aa13.19□□□□□ -0.3
CNOT2-215ENST00000548863 HPS5Q9UPZ3 1129 aa13.19□□□□□ -0.3
CNOT2-215ENST00000548863 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
CNOT2-215ENST00000548863 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
CNOT2-215ENST00000548863 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
CNOT2-215ENST00000548863 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
CNOT2-215ENST00000548863 C3orf80F5H4A9 247 aa13.16□□□□□ -0.3
CNOT2-215ENST00000548863 KCNC4Q03721 635 aa13.15□□□□□ -0.3
CNOT2-215ENST00000548863 SMAPO00193 183 aa13.14□□□□□ -0.31
CNOT2-215ENST00000548863 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
CNOT2-215ENST00000548863 PPP4CP60510 307 aa13.13□□□□□ -0.31
CNOT2-215ENST00000548863 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
CNOT2-215ENST00000548863 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
CNOT2-215ENST00000548863 NUDT18Q6ZVK8 323 aa13.11□□□□□ -0.31
CNOT2-215ENST00000548863 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
CNOT2-215ENST00000548863 MLLT3P42568 568 aaPredicted RBP13.07□□□□□ -0.32
CNOT2-215ENST00000548863 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CNOT2-215ENST00000548863 P3H3Q8IVL6 736 aa13.05□□□□□ -0.32
CNOT2-215ENST00000548863 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
CNOT2-215ENST00000548863 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
CNOT2-215ENST00000548863 EYA1Q99502 592 aa13.03□□□□□ -0.32
CNOT2-215ENST00000548863 PTGDRQ13258 359 aa13.01□□□□□ -0.33
CNOT2-215ENST00000548863 IRX2Q9BZI1 471 aaPredicted RBP13□□□□□ -0.33
CNOT2-215ENST00000548863 SLF2Q8IX21 1173 aa12.98□□□□□ -0.33
CNOT2-215ENST00000548863 SWT1Q5T5J6 900 aaKnown RBP12.97□□□□□ -0.33
CNOT2-215ENST00000548863 MTRQ99707 1265 aa12.97□□□□□ -0.33
CNOT2-215ENST00000548863 IL21Q9HBE4 155 aa12.97□□□□□ -0.33
CNOT2-215ENST00000548863 APLP1P51693 650 aa12.96□□□□□ -0.33
CNOT2-215ENST00000548863 RNF40O75150 1001 aa12.93□□□□□ -0.34
CNOT2-215ENST00000548863 SLC4A3P48751 1232 aa12.93□□□□□ -0.34
CNOT2-215ENST00000548863 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
CNOT2-215ENST00000548863 SEMA3EO15041 775 aa12.9□□□□□ -0.34
CNOT2-215ENST00000548863 RBM46Q8TBY0 533 aaKnown RBP12.9□□□□□ -0.34
CNOT2-215ENST00000548863 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
CNOT2-215ENST00000548863 DNAJB2P25686 324 aa12.89□□□□□ -0.35
CNOT2-215ENST00000548863 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
CNOT2-215ENST00000548863 ZNF516Q92618 1163 aa12.88□□□□□ -0.35
CNOT2-215ENST00000548863 PRR14Q9BWN1 585 aa12.88□□□□□ -0.35
CNOT2-215ENST00000548863 TMEM134Q9H6X4 195 aa12.87□□□□□ -0.35
CNOT2-215ENST00000548863 FCHSD2O94868 740 aa12.86□□□□□ -0.35
CNOT2-215ENST00000548863 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
CNOT2-215ENST00000548863 TESPA1A2RU30 521 aaPredicted RBP12.83□□□□□ -0.36
CNOT2-215ENST00000548863 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.82□□□□□ -0.36
CNOT2-215ENST00000548863 RCCD1A6NED2 376 aa12.81□□□□□ -0.36
CNOT2-215ENST00000548863 ZPR1O75312 459 aa12.8□□□□□ -0.36
CNOT2-215ENST00000548863 HIC1Q14526 733 aa12.8□□□□□ -0.36
CNOT2-215ENST00000548863 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
CNOT2-215ENST00000548863 V9GY48 417 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms