RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
CCDC38-206ENST00000548771 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
CCDC38-206ENST00000548771 COL9A1P20849 921 aa11.79□□□□□ -0.52
CCDC38-206ENST00000548771 ARIH1Q9Y4X5 557 aaPredicted RBP11.79□□□□□ -0.52
CCDC38-206ENST00000548771 DPYSL4O14531 572 aa11.78□□□□□ -0.52
CCDC38-206ENST00000548771 NBPF3Q9H094 633 aa11.78□□□□□ -0.52
CCDC38-206ENST00000548771 PCDHGA10Q9Y5H3 936 aa11.78□□□□□ -0.52
CCDC38-206ENST00000548771 RGS20O76081 388 aa11.77□□□□□ -0.53
CCDC38-206ENST00000548771 TSHZ2Q9NRE2 1034 aa11.77□□□□□ -0.53
CCDC38-206ENST00000548771 E2F4Q16254 413 aa11.76□□□□□ -0.53
CCDC38-206ENST00000548771 BCAMP50895 628 aa11.75□□□□□ -0.53
CCDC38-206ENST00000548771 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
CCDC38-206ENST00000548771 PHF14O94880 888 aa11.73□□□□□ -0.53
CCDC38-206ENST00000548771 PDIA6Q15084 440 aa11.72□□□□□ -0.53
CCDC38-206ENST00000548771 RABGEF1Q9UJ41 708 aa11.72□□□□□ -0.53
CCDC38-206ENST00000548771 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
CCDC38-206ENST00000548771 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
CCDC38-206ENST00000548771 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
CCDC38-206ENST00000548771 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
CCDC38-206ENST00000548771 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
CCDC38-206ENST00000548771 KIAA1468Q9P260 1216 aa11.68□□□□□ -0.54
CCDC38-206ENST00000548771 ITGBL1O95965 494 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-206ENST00000548771 EPAS1Q99814 870 aa11.67□□□□□ -0.54
CCDC38-206ENST00000548771 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-206ENST00000548771 SOWAHBA6NEL2 793 aa11.65□□□□□ -0.54
CCDC38-206ENST00000548771 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
CCDC38-206ENST00000548771 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
CCDC38-206ENST00000548771 ZFRQ96KR1 1074 aaKnown RBP11.64□□□□□ -0.55
CCDC38-206ENST00000548771 DDX12PQ92771 950 aa11.63□□□□□ -0.55
CCDC38-206ENST00000548771 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
CCDC38-206ENST00000548771 LAPTM4BQ86VI4 370 aa11.59□□□□□ -0.55
CCDC38-206ENST00000548771 RBM33Q96EV2 1170 aaKnown RBP11.59□□□□□ -0.55
CCDC38-206ENST00000548771 Q6ZNB5 142 aa11.58□□□□□ -0.56
CCDC38-206ENST00000548771 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
CCDC38-206ENST00000548771 EN1Q05925 392 aaPredicted RBP11.57□□□□□ -0.56
CCDC38-206ENST00000548771 KCNV2Q8TDN2 545 aa11.56□□□□□ -0.56
CCDC38-206ENST00000548771 ARHGEF1Q92888 912 aaKnown RBP11.56□□□□□ -0.56
CCDC38-206ENST00000548771 KCNC4Q03721 635 aa11.55□□□□□ -0.56
CCDC38-206ENST00000548771 TRIM6-TRIM34B2RNG4 842 aa11.54□□□□□ -0.56
CCDC38-206ENST00000548771 ONECUT3O60422 494 aaPredicted RBP11.54□□□□□ -0.56
CCDC38-206ENST00000548771 NBR1Q14596 966 aa11.54□□□□□ -0.56
CCDC38-206ENST00000548771 OSBPP22059 807 aa11.53□□□□□ -0.56
CCDC38-206ENST00000548771 HPS5Q9UPZ3 1129 aa11.53□□□□□ -0.56
CCDC38-206ENST00000548771 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
CCDC38-206ENST00000548771 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
CCDC38-206ENST00000548771 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
CCDC38-206ENST00000548771 LCE2BO14633 110 aa11.5□□□□□ -0.57
CCDC38-206ENST00000548771 NYAP1Q6ZVC0 841 aa11.5□□□□□ -0.57
CCDC38-206ENST00000548771 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-206ENST00000548771 TSR3Q9UJK0 312 aaKnown RBP11.49□□□□□ -0.57
CCDC38-206ENST00000548771 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
CCDC38-206ENST00000548771 TSKSQ9UJT2 592 aa11.48□□□□□ -0.57
CCDC38-206ENST00000548771 MAP3K7O43318 606 aa11.47□□□□□ -0.57
CCDC38-206ENST00000548771 SMAPO00193 183 aa11.44□□□□□ -0.58
CCDC38-206ENST00000548771 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
CCDC38-206ENST00000548771 MLLT3P42568 568 aaPredicted RBP11.43□□□□□ -0.58
CCDC38-206ENST00000548771 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
CCDC38-206ENST00000548771 CERKQ8TCT0 537 aa11.41□□□□□ -0.58
CCDC38-206ENST00000548771 CDHR5Q9HBB8 845 aa11.41□□□□□ -0.58
CCDC38-206ENST00000548771 NPDC1Q9NQX5 325 aaPredicted RBP11.41□□□□□ -0.58
CCDC38-206ENST00000548771 FAM198AQ9UFP1 575 aa11.41□□□□□ -0.58
CCDC38-206ENST00000548771 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
CCDC38-206ENST00000548771 GFRA3O60609 400 aa11.4□□□□□ -0.58
CCDC38-206ENST00000548771 PRSS12P56730 875 aa11.39□□□□□ -0.59
CCDC38-206ENST00000548771 PPP4CP60510 307 aa11.39□□□□□ -0.59
CCDC38-206ENST00000548771 TJAP1Q5JTD0 557 aa11.39□□□□□ -0.59
CCDC38-206ENST00000548771 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
CCDC38-206ENST00000548771 PACS2Q86VP3 889 aa11.39□□□□□ -0.59
CCDC38-206ENST00000548771 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
CCDC38-206ENST00000548771 HAP1P54257 671 aaPredicted RBP11.38□□□□□ -0.59
CCDC38-206ENST00000548771 TTC13Q8NBP0 860 aa11.37□□□□□ -0.59
CCDC38-206ENST00000548771 TRAF7Q6Q0C0 670 aa11.36□□□□□ -0.59
CCDC38-206ENST00000548771 PRKD2Q9BZL6 878 aa11.36□□□□□ -0.59
CCDC38-206ENST00000548771 RBM27Q9P2N5 1060 aaKnown RBP11.36□□□□□ -0.59
CCDC38-206ENST00000548771 SEMA3EO15041 775 aa11.34□□□□□ -0.59
CCDC38-206ENST00000548771 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
CCDC38-206ENST00000548771 MTRQ99707 1265 aa11.34□□□□□ -0.59
CCDC38-206ENST00000548771 LAPTM4AQ15012 233 aa11.32□□□□□ -0.6
CCDC38-206ENST00000548771 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
CCDC38-206ENST00000548771 TATDN2Q93075 761 aa11.3□□□□□ -0.6
CCDC38-206ENST00000548771 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
CCDC38-206ENST00000548771 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
CCDC38-206ENST00000548771 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
CCDC38-206ENST00000548771 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
CCDC38-206ENST00000548771 PTGDRQ13258 359 aa11.28□□□□□ -0.6
CCDC38-206ENST00000548771 RNF40O75150 1001 aa11.27□□□□□ -0.61
CCDC38-206ENST00000548771 APLP1P51693 650 aa11.27□□□□□ -0.61
CCDC38-206ENST00000548771 PADI6Q6TGC4 694 aa11.27□□□□□ -0.61
CCDC38-206ENST00000548771 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
CCDC38-206ENST00000548771 NUDT18Q6ZVK8 323 aa11.25□□□□□ -0.61
CCDC38-206ENST00000548771 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
CCDC38-206ENST00000548771 NRG2O14511 850 aaPredicted RBP11.24□□□□□ -0.61
CCDC38-206ENST00000548771 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
CCDC38-206ENST00000548771 EYA1Q99502 592 aa11.22□□□□□ -0.61
CCDC38-206ENST00000548771 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
CCDC38-206ENST00000548771 COPS2P61201 443 aa11.2□□□□□ -0.62
CCDC38-206ENST00000548771 NUTM2FA1L443 756 aa11.18□□□□□ -0.62
CCDC38-206ENST00000548771 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
CCDC38-206ENST00000548771 RBM26Q5T8P6 1007 aaKnown RBP11.17□□□□□ -0.62
CCDC38-206ENST00000548771 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms