RNA–Protein interactions for RNA: ENST00000548350.1

ASIC1-204, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 4

Gene ASIC1, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-204ENST00000548350 DHX29Q7Z478 1369 aaKnown RBP16.34■□□□□ 0.21
ASIC1-204ENST00000548350 UBAP1LF5GYI3 381 aa16.33■□□□□ 0.2
ASIC1-204ENST00000548350 NPATQ14207 1427 aa16.33■□□□□ 0.2
ASIC1-204ENST00000548350 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
ASIC1-204ENST00000548350 PTPN23Q9H3S7 1636 aa16.31■□□□□ 0.2
ASIC1-204ENST00000548350 IQSEC2Q5JU85 1478 aa16.31■□□□□ 0.2
ASIC1-204ENST00000548350 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
ASIC1-204ENST00000548350 PLXNC1O60486 1568 aa16.27■□□□□ 0.2
ASIC1-204ENST00000548350 PKD2Q13563 968 aa16.27■□□□□ 0.2
ASIC1-204ENST00000548350 MROH2AA6NES4 1674 aa16.27■□□□□ 0.19
ASIC1-204ENST00000548350 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
ASIC1-204ENST00000548350 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
ASIC1-204ENST00000548350 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
ASIC1-204ENST00000548350 CLTCQ00610 1675 aaKnown RBP16.26■□□□□ 0.19
ASIC1-204ENST00000548350 PTPRKQ15262 1439 aa16.26■□□□□ 0.19
ASIC1-204ENST00000548350 MAST1Q9Y2H9 1570 aa16.26■□□□□ 0.19
ASIC1-204ENST00000548350 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
ASIC1-204ENST00000548350 ABCC5O15440 1437 aa16.25■□□□□ 0.19
ASIC1-204ENST00000548350 ANKRD30AQ9BXX3 1397 aa16.25■□□□□ 0.19
ASIC1-204ENST00000548350 DAPK1P53355 1430 aa16.24■□□□□ 0.19
ASIC1-204ENST00000548350 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
ASIC1-204ENST00000548350 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
ASIC1-204ENST00000548350 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
ASIC1-204ENST00000548350 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
ASIC1-204ENST00000548350 PLA2R1Q13018 1463 aa16.22■□□□□ 0.19
ASIC1-204ENST00000548350 CEP170BQ9Y4F5 1589 aaPredicted RBP16.21■□□□□ 0.19
ASIC1-204ENST00000548350 DUOX2Q9NRD8 1548 aa16.2■□□□□ 0.18
ASIC1-204ENST00000548350 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
ASIC1-204ENST00000548350 PIP4K2BP78356 416 aa16.2■□□□□ 0.18
ASIC1-204ENST00000548350 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
ASIC1-204ENST00000548350 HSPA1LP34931 641 aa16.18■□□□□ 0.18
ASIC1-204ENST00000548350 ITGAEP38570 1179 aa16.18■□□□□ 0.18
ASIC1-204ENST00000548350 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
ASIC1-204ENST00000548350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.18
ASIC1-204ENST00000548350 CROCC2H7BZ55 1655 aa16.18■□□□□ 0.18
ASIC1-204ENST00000548350 KANK1Q14678 1352 aa16.17■□□□□ 0.18
ASIC1-204ENST00000548350 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
ASIC1-204ENST00000548350 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
ASIC1-204ENST00000548350 ERBINQ96RT1 1412 aa16.16■□□□□ 0.18
ASIC1-204ENST00000548350 KDM5DQ9BY66 1539 aa16.15■□□□□ 0.18
ASIC1-204ENST00000548350 EIF2AK4Q9P2K8 1649 aaKnown RBP16.15■□□□□ 0.18
ASIC1-204ENST00000548350 TNRQ92752 1358 aa16.14■□□□□ 0.17
ASIC1-204ENST00000548350 TOM1O60784 492 aa16.13■□□□□ 0.17
ASIC1-204ENST00000548350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
ASIC1-204ENST00000548350 ANKLE2Q86XL3 938 aa16.11■□□□□ 0.17
ASIC1-204ENST00000548350 RNF17Q9BXT8 1623 aaKnown RBP16.1■□□□□ 0.17
ASIC1-204ENST00000548350 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
ASIC1-204ENST00000548350 ADGRL2O95490 1459 aa16.1■□□□□ 0.17
ASIC1-204ENST00000548350 ANKRD50Q9ULJ7 1429 aa16.09■□□□□ 0.17
ASIC1-204ENST00000548350 ROCK1Q13464 1354 aa16.08■□□□□ 0.16
ASIC1-204ENST00000548350 PZPP20742 1482 aa16.08■□□□□ 0.16
ASIC1-204ENST00000548350 THEMISQ8N1K5 641 aaPredicted RBP16.07■□□□□ 0.16
ASIC1-204ENST00000548350 CPS1P31327 1500 aa16.07■□□□□ 0.16
ASIC1-204ENST00000548350 NEURL4Q96JN8 1562 aa16.07■□□□□ 0.16
ASIC1-204ENST00000548350 ZC3H13Q5T200 1668 aaKnown RBP16.07■□□□□ 0.16
ASIC1-204ENST00000548350 CFAP65Q6ZU64 1925 aaKnown RBP16.06■□□□□ 0.16
ASIC1-204ENST00000548350 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
ASIC1-204ENST00000548350 ABCC3O15438 1527 aa16.06■□□□□ 0.16
ASIC1-204ENST00000548350 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
ASIC1-204ENST00000548350 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
ASIC1-204ENST00000548350 NPHP4O75161 1426 aaPredicted RBP16.03■□□□□ 0.16
ASIC1-204ENST00000548350 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
ASIC1-204ENST00000548350 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
ASIC1-204ENST00000548350 PRDM15P57071 1507 aaPredicted RBP16.02■□□□□ 0.15
ASIC1-204ENST00000548350 CEP152O94986 1710 aa16.02■□□□□ 0.15
ASIC1-204ENST00000548350 VWDEQ8N2E2 1590 aa16.01■□□□□ 0.15
ASIC1-204ENST00000548350 NLRP1Q9C000 1473 aa16.01■□□□□ 0.15
ASIC1-204ENST00000548350 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
ASIC1-204ENST00000548350 MROH1Q8NDA8 1641 aa16■□□□□ 0.15
ASIC1-204ENST00000548350 ARHGAP31Q2M1Z3 1444 aa16■□□□□ 0.15
ASIC1-204ENST00000548350 DEPDC5O75140 1603 aa15.99■□□□□ 0.15
ASIC1-204ENST00000548350 MED14O60244 1454 aa15.97■□□□□ 0.15
ASIC1-204ENST00000548350 ERVK-7P63135 1459 aa15.97■□□□□ 0.15
ASIC1-204ENST00000548350 ALKQ9UM73 1620 aa15.96■□□□□ 0.15
ASIC1-204ENST00000548350 NUP155O75694 1391 aa15.96■□□□□ 0.15
ASIC1-204ENST00000548350 LMTK2Q8IWU2 1503 aa15.94■□□□□ 0.14
ASIC1-204ENST00000548350 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
ASIC1-204ENST00000548350 SLC52A1Q9NWF4 448 aa15.94■□□□□ 0.14
ASIC1-204ENST00000548350 IQGAP1P46940 1657 aa15.93■□□□□ 0.14
ASIC1-204ENST00000548350 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
ASIC1-204ENST00000548350 EID1Q9Y6B2 187 aa15.93■□□□□ 0.14
ASIC1-204ENST00000548350 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
ASIC1-204ENST00000548350 STRCP1A6NGW2 1772 aa15.9■□□□□ 0.14
ASIC1-204ENST00000548350 HDGFP51858 240 aaKnown RBP15.9■□□□□ 0.14
ASIC1-204ENST00000548350 IDI1Q13907 227 aa15.9■□□□□ 0.14
ASIC1-204ENST00000548350 TXNDC2Q86VQ3 553 aa15.9■□□□□ 0.14
ASIC1-204ENST00000548350 EFCAB6Q5THR3 1501 aa15.89■□□□□ 0.13
ASIC1-204ENST00000548350 UNC13BO14795 1591 aa15.89■□□□□ 0.13
ASIC1-204ENST00000548350 LTKP29376 864 aa15.89■□□□□ 0.13
ASIC1-204ENST00000548350 TET3O43151 1660 aa15.89■□□□□ 0.13
ASIC1-204ENST00000548350 NAIPQ13075 1403 aa15.87■□□□□ 0.13
ASIC1-204ENST00000548350 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
ASIC1-204ENST00000548350 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
ASIC1-204ENST00000548350 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
ASIC1-204ENST00000548350 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
ASIC1-204ENST00000548350 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
ASIC1-204ENST00000548350 NOS1P29475 1434 aa15.85■□□□□ 0.13
ASIC1-204ENST00000548350 BCANQ96GW7 911 aa15.85■□□□□ 0.13
ASIC1-204ENST00000548350 RGS17Q9UGC6 210 aaPredicted RBP15.85■□□□□ 0.13
ASIC1-204ENST00000548350 SYNMO15061 1565 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms