RNA–Protein interactions for RNA: ENST00000548296.1

RPAP3-206, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 3

Gene RPAP3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-206ENST00000548296 KCTD12Q96CX2 325 aaKnown RBP10.43□□□□□ -0.74
RPAP3-206ENST00000548296 GOLGA8CPA6NN73 597 aa10.42□□□□□ -0.74
RPAP3-206ENST00000548296 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
RPAP3-206ENST00000548296 MRPL50Q8N5N7 158 aaKnown RBP10.41□□□□□ -0.74
RPAP3-206ENST00000548296 SPDYE16A6NNV3 312 aaPredicted RBP10.4□□□□□ -0.74
RPAP3-206ENST00000548296 E2F4Q16254 413 aa10.4□□□□□ -0.74
RPAP3-206ENST00000548296 PLA2G2EQ9NZK7 142 aa10.38□□□□□ -0.75
RPAP3-206ENST00000548296 RABGEF1Q9UJ41 708 aa10.37□□□□□ -0.75
RPAP3-206ENST00000548296 ONECUT3O60422 494 aaPredicted RBP10.36□□□□□ -0.75
RPAP3-206ENST00000548296 PDIA6Q15084 440 aa10.36□□□□□ -0.75
RPAP3-206ENST00000548296 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
RPAP3-206ENST00000548296 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
RPAP3-206ENST00000548296 PLCB2Q00722 1185 aa10.35□□□□□ -0.75
RPAP3-206ENST00000548296 DDX12PQ92771 950 aa10.35□□□□□ -0.75
RPAP3-206ENST00000548296 WNT2BQ93097 391 aa10.35□□□□□ -0.75
RPAP3-206ENST00000548296 COL9A1P20849 921 aa10.34□□□□□ -0.75
RPAP3-206ENST00000548296 PTPN5P54829 565 aa10.33□□□□□ -0.76
RPAP3-206ENST00000548296 THSD4Q6ZMP0 1018 aa10.33□□□□□ -0.76
RPAP3-206ENST00000548296 LAPTM4BQ86VI4 370 aa10.33□□□□□ -0.76
RPAP3-206ENST00000548296 PROX2Q3B8N5 592 aa10.31□□□□□ -0.76
RPAP3-206ENST00000548296 RBM33Q96EV2 1170 aaKnown RBP10.31□□□□□ -0.76
RPAP3-206ENST00000548296 NBR1Q14596 966 aa10.3□□□□□ -0.76
RPAP3-206ENST00000548296 ANKK1Q8NFD2 765 aa10.29□□□□□ -0.76
RPAP3-206ENST00000548296 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
RPAP3-206ENST00000548296 MAP3K7O43318 606 aa10.28□□□□□ -0.76
RPAP3-206ENST00000548296 EN1Q05925 392 aaPredicted RBP10.28□□□□□ -0.76
RPAP3-206ENST00000548296 TRIM6-TRIM34B2RNG4 842 aa10.27□□□□□ -0.77
RPAP3-206ENST00000548296 PACS2Q86VP3 889 aa10.25□□□□□ -0.77
RPAP3-206ENST00000548296 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
RPAP3-206ENST00000548296 GRXCR2A6NFK2 248 aa10.23□□□□□ -0.77
RPAP3-206ENST00000548296 FAM98CQ17RN3 349 aaKnown RBP10.22□□□□□ -0.77
RPAP3-206ENST00000548296 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
RPAP3-206ENST00000548296 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
RPAP3-206ENST00000548296 SOWAHBA6NEL2 793 aa10.21□□□□□ -0.77
RPAP3-206ENST00000548296 TSR1Q2NL82 804 aaKnown RBP10.21□□□□□ -0.77
RPAP3-206ENST00000548296 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
RPAP3-206ENST00000548296 TSHZ2Q9NRE2 1034 aa10.2□□□□□ -0.78
RPAP3-206ENST00000548296 SEPT9Q9UHD8 586 aaPredicted RBP10.19□□□□□ -0.78
RPAP3-206ENST00000548296 PRSS12P56730 875 aa10.18□□□□□ -0.78
RPAP3-206ENST00000548296 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
RPAP3-206ENST00000548296 OSBPP22059 807 aa10.17□□□□□ -0.78
RPAP3-206ENST00000548296 CDCA7LQ96GN5 454 aa10.17□□□□□ -0.78
RPAP3-206ENST00000548296 TSKSQ9UJT2 592 aa10.17□□□□□ -0.78
RPAP3-206ENST00000548296 BCAMP50895 628 aa10.16□□□□□ -0.78
RPAP3-206ENST00000548296 LRCH3Q96II8 777 aa10.15□□□□□ -0.78
RPAP3-206ENST00000548296 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
RPAP3-206ENST00000548296 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
RPAP3-206ENST00000548296 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
RPAP3-206ENST00000548296 RGS20O76081 388 aa10.13□□□□□ -0.79
RPAP3-206ENST00000548296 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
RPAP3-206ENST00000548296 NBPF26B4DH59 902 aa10.12□□□□□ -0.79
RPAP3-206ENST00000548296 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
RPAP3-206ENST00000548296 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
RPAP3-206ENST00000548296 WBP1LQ9NX94 342 aa10.11□□□□□ -0.79
RPAP3-206ENST00000548296 P3H3Q8IVL6 736 aa10.1□□□□□ -0.79
RPAP3-206ENST00000548296 TATDN2Q93075 761 aa10.1□□□□□ -0.79
RPAP3-206ENST00000548296 ITGBL1O95965 494 aaPredicted RBP10.09□□□□□ -0.79
RPAP3-206ENST00000548296 HPS5Q9UPZ3 1129 aa10.09□□□□□ -0.79
RPAP3-206ENST00000548296 A0A0G2JS52 829 aa10.08□□□□□ -0.8
RPAP3-206ENST00000548296 PPP4CP60510 307 aa10.08□□□□□ -0.8
RPAP3-206ENST00000548296 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
RPAP3-206ENST00000548296 PNMA3Q9UL41 463 aa10.08□□□□□ -0.8
RPAP3-206ENST00000548296 VSIG10Q8N0Z9 540 aa10.07□□□□□ -0.8
RPAP3-206ENST00000548296 CDHR5Q9HBB8 845 aa10.07□□□□□ -0.8
RPAP3-206ENST00000548296 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
RPAP3-206ENST00000548296 SMAPO00193 183 aa10.05□□□□□ -0.8
RPAP3-206ENST00000548296 KCNC4Q03721 635 aa10.05□□□□□ -0.8
RPAP3-206ENST00000548296 NUDT18Q6ZVK8 323 aa10.05□□□□□ -0.8
RPAP3-206ENST00000548296 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
RPAP3-206ENST00000548296 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
RPAP3-206ENST00000548296 NPDC1Q9NQX5 325 aaPredicted RBP10.04□□□□□ -0.8
RPAP3-206ENST00000548296 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
RPAP3-206ENST00000548296 MLLT3P42568 568 aaPredicted RBP10.02□□□□□ -0.81
RPAP3-206ENST00000548296 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
RPAP3-206ENST00000548296 PADI6Q6TGC4 694 aa10□□□□□ -0.81
RPAP3-206ENST00000548296 C3orf80F5H4A9 247 aa9.99□□□□□ -0.81
RPAP3-206ENST00000548296 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
RPAP3-206ENST00000548296 PTGDRQ13258 359 aa9.96□□□□□ -0.82
RPAP3-206ENST00000548296 NUTM2FA1L443 756 aa9.95□□□□□ -0.82
RPAP3-206ENST00000548296 RNF40O75150 1001 aa9.95□□□□□ -0.82
RPAP3-206ENST00000548296 EYA1Q99502 592 aa9.95□□□□□ -0.82
RPAP3-206ENST00000548296 SMYD5Q6GMV2 418 aa9.94□□□□□ -0.82
RPAP3-206ENST00000548296 SEMA3EO15041 775 aa9.93□□□□□ -0.82
RPAP3-206ENST00000548296 SWT1Q5T5J6 900 aaKnown RBP9.93□□□□□ -0.82
RPAP3-206ENST00000548296 RBM46Q8TBY0 533 aaKnown RBP9.93□□□□□ -0.82
RPAP3-206ENST00000548296 IL21Q9HBE4 155 aa9.93□□□□□ -0.82
RPAP3-206ENST00000548296 TJAP1Q5JTD0 557 aa9.92□□□□□ -0.82
RPAP3-206ENST00000548296 FCHSD2O94868 740 aa9.91□□□□□ -0.82
RPAP3-206ENST00000548296 PRR14Q9BWN1 585 aa9.91□□□□□ -0.82
RPAP3-206ENST00000548296 IRX2Q9BZI1 471 aaPredicted RBP9.91□□□□□ -0.82
RPAP3-206ENST00000548296 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
RPAP3-206ENST00000548296 DNAJB2P25686 324 aa9.9□□□□□ -0.82
RPAP3-206ENST00000548296 BCANQ96GW7 911 aa9.9□□□□□ -0.82
RPAP3-206ENST00000548296 MTRQ99707 1265 aa9.9□□□□□ -0.82
RPAP3-206ENST00000548296 APLP1P51693 650 aa9.88□□□□□ -0.83
RPAP3-206ENST00000548296 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
RPAP3-206ENST00000548296 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
RPAP3-206ENST00000548296 OATP04181 439 aa9.85□□□□□ -0.83
RPAP3-206ENST00000548296 TMEM134Q9H6X4 195 aa9.85□□□□□ -0.83
RPAP3-206ENST00000548296 HIC1Q14526 733 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms