RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
CALCOCO1-210ENST00000548263 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
CALCOCO1-210ENST00000548263 BECN1Q14457 450 aa12.33□□□□□ -0.44
CALCOCO1-210ENST00000548263 PNISRQ8TF01 805 aaKnown RBP12.33□□□□□ -0.44
CALCOCO1-210ENST00000548263 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 SUPT6HQ7KZ85 1726 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 DAPK1P53355 1430 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 PBRM1Q86U86 1689 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 STK26Q9P289 416 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CALCOCO1-210ENST00000548263 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 USP35Q9P2H5 1018 aa12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 ABCC5O15440 1437 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 NBPF1Q3BBV0 1214 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 PANK3Q9H999 370 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 HSP90AA1P07900 732 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 MS4A1P11836 297 aa12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
CALCOCO1-210ENST00000548263 IL27Q8NEV9 243 aa12.27□□□□□ -0.44
CALCOCO1-210ENST00000548263 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO1-210ENST00000548263 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
CALCOCO1-210ENST00000548263 CCDC144AA2RUR9 1427 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 MIA2Q96PC5 1412 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 MAGI3Q5TCQ9 1506 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 GSE1Q14687 1217 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 BACH2Q9BYV9 841 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 ATP10BO94823 1461 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 KANK1Q14678 1352 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 SKAP1Q86WV1 359 aa12.22□□□□□ -0.45
CALCOCO1-210ENST00000548263 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
CALCOCO1-210ENST00000548263 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.45
CALCOCO1-210ENST00000548263 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
CALCOCO1-210ENST00000548263 CENPQQ7L2Z9 268 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO1-210ENST00000548263 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.46
CALCOCO1-210ENST00000548263 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.46
CALCOCO1-210ENST00000548263 NFKBIBQ15653 356 aa12.2□□□□□ -0.46
CALCOCO1-210ENST00000548263 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
CALCOCO1-210ENST00000548263 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
CALCOCO1-210ENST00000548263 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
CALCOCO1-210ENST00000548263 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
CALCOCO1-210ENST00000548263 SOX12O15370 315 aa12.18□□□□□ -0.46
CALCOCO1-210ENST00000548263 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
CALCOCO1-210ENST00000548263 POGKQ9P215 609 aa12.18□□□□□ -0.46
CALCOCO1-210ENST00000548263 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 APAF1O14727 1248 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CHD1O14646 1710 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 NAP1L5Q96NT1 182 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 GLIPR1L2Q4G1C9 344 aa12.14□□□□□ -0.47
CALCOCO1-210ENST00000548263 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
CALCOCO1-210ENST00000548263 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
CALCOCO1-210ENST00000548263 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
CALCOCO1-210ENST00000548263 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-210ENST00000548263 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 NUP160Q12769 1436 aa12.1□□□□□ -0.47
CALCOCO1-210ENST00000548263 KIF14Q15058 1648 aa12.1□□□□□ -0.47
CALCOCO1-210ENST00000548263 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
CALCOCO1-210ENST00000548263 SHROOM2Q13796 1616 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms