RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 ZBED2Q9BTP6 218 aa9.27□□□□□ -0.93
TRAFD1-204ENST00000548092 KCNH8Q96L42 1107 aa9.26□□□□□ -0.93
TRAFD1-204ENST00000548092 SLC4A5Q9BY07 1137 aa9.25□□□□□ -0.93
TRAFD1-204ENST00000548092 ARIH1Q9Y4X5 557 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-204ENST00000548092 BHMG1C9JSJ3 638 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-204ENST00000548092 FBXW7Q969H0 707 aa9.24□□□□□ -0.93
TRAFD1-204ENST00000548092 C6orf132Q5T0Z8 1188 aa9.23□□□□□ -0.93
TRAFD1-204ENST00000548092 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
TRAFD1-204ENST00000548092 EPAS1Q99814 870 aa9.23□□□□□ -0.93
TRAFD1-204ENST00000548092 SPDYE16A6NNV3 312 aaPredicted RBP9.22□□□□□ -0.93
TRAFD1-204ENST00000548092 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
TRAFD1-204ENST00000548092 PROX2Q3B8N5 592 aa9.22□□□□□ -0.93
TRAFD1-204ENST00000548092 CC2D2AQ9P2K1 1620 aa9.21□□□□□ -0.93
TRAFD1-204ENST00000548092 PPP1R3GB7ZBB8 358 aa9.21□□□□□ -0.94
TRAFD1-204ENST00000548092 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
TRAFD1-204ENST00000548092 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
TRAFD1-204ENST00000548092 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
TRAFD1-204ENST00000548092 NBR1Q14596 966 aa9.19□□□□□ -0.94
TRAFD1-204ENST00000548092 KCTD12Q96CX2 325 aaKnown RBP9.19□□□□□ -0.94
TRAFD1-204ENST00000548092 STAC3Q96MF2 364 aa9.19□□□□□ -0.94
TRAFD1-204ENST00000548092 UNC13AQ9UPW8 1703 aa9.19□□□□□ -0.94
TRAFD1-204ENST00000548092 TSR1Q2NL82 804 aaKnown RBP9.18□□□□□ -0.94
TRAFD1-204ENST00000548092 NACADO15069 1562 aa9.17□□□□□ -0.94
TRAFD1-204ENST00000548092 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
TRAFD1-204ENST00000548092 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
TRAFD1-204ENST00000548092 CUX2O14529 1486 aa9.16□□□□□ -0.94
TRAFD1-204ENST00000548092 OSBPP22059 807 aa9.15□□□□□ -0.94
TRAFD1-204ENST00000548092 KIAA1468Q9P260 1216 aa9.14□□□□□ -0.95
TRAFD1-204ENST00000548092 HCSTQ9UBK5 93 aa9.14□□□□□ -0.95
TRAFD1-204ENST00000548092 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
TRAFD1-204ENST00000548092 MAP3K7O43318 606 aa9.13□□□□□ -0.95
TRAFD1-204ENST00000548092 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
TRAFD1-204ENST00000548092 ARHGEF1Q92888 912 aaKnown RBP9.12□□□□□ -0.95
TRAFD1-204ENST00000548092 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
TRAFD1-204ENST00000548092 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
TRAFD1-204ENST00000548092 PTPN5P54829 565 aa9.11□□□□□ -0.95
TRAFD1-204ENST00000548092 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
TRAFD1-204ENST00000548092 WNT2BQ93097 391 aa9.1□□□□□ -0.95
TRAFD1-204ENST00000548092 NBPF3Q9H094 633 aa9.1□□□□□ -0.95
TRAFD1-204ENST00000548092 CDHR5Q9HBB8 845 aa9.1□□□□□ -0.95
TRAFD1-204ENST00000548092 GOLGA8CPA6NN73 597 aa9.09□□□□□ -0.95
TRAFD1-204ENST00000548092 ONECUT3O60422 494 aaPredicted RBP9.09□□□□□ -0.95
TRAFD1-204ENST00000548092 THSD4Q6ZMP0 1018 aa9.09□□□□□ -0.95
TRAFD1-204ENST00000548092 FAM198AQ9UFP1 575 aa9.09□□□□□ -0.95
TRAFD1-204ENST00000548092 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
TRAFD1-204ENST00000548092 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
TRAFD1-204ENST00000548092 HAP1P54257 671 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-204ENST00000548092 CDCA7LQ96GN5 454 aa9.06□□□□□ -0.96
TRAFD1-204ENST00000548092 NPDC1Q9NQX5 325 aaPredicted RBP9.06□□□□□ -0.96
TRAFD1-204ENST00000548092 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
TRAFD1-204ENST00000548092 PRSS12P56730 875 aa9.05□□□□□ -0.96
TRAFD1-204ENST00000548092 ZFRQ96KR1 1074 aaKnown RBP9.05□□□□□ -0.96
TRAFD1-204ENST00000548092 LAPTM4BQ86VI4 370 aa9.04□□□□□ -0.96
TRAFD1-204ENST00000548092 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
TRAFD1-204ENST00000548092 SMAPO00193 183 aa9.03□□□□□ -0.96
TRAFD1-204ENST00000548092 SEMA3EO15041 775 aa9.03□□□□□ -0.96
TRAFD1-204ENST00000548092 BCAMP50895 628 aa9.03□□□□□ -0.96
TRAFD1-204ENST00000548092 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
TRAFD1-204ENST00000548092 SHROOM4Q9ULL8 1493 aa9.02□□□□□ -0.96
TRAFD1-204ENST00000548092 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
TRAFD1-204ENST00000548092 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
TRAFD1-204ENST00000548092 FAM98CQ17RN3 349 aaKnown RBP9□□□□□ -0.97
TRAFD1-204ENST00000548092 P3H3Q8IVL6 736 aa9□□□□□ -0.97
TRAFD1-204ENST00000548092 ANKK1Q8NFD2 765 aa9□□□□□ -0.97
TRAFD1-204ENST00000548092 CERKQ8TCT0 537 aa9□□□□□ -0.97
TRAFD1-204ENST00000548092 TATDN2Q93075 761 aa8.99□□□□□ -0.97
TRAFD1-204ENST00000548092 TTC13Q8NBP0 860 aa8.98□□□□□ -0.97
TRAFD1-204ENST00000548092 PADI6Q6TGC4 694 aa8.97□□□□□ -0.97
TRAFD1-204ENST00000548092 WBP1LQ9NX94 342 aa8.97□□□□□ -0.97
TRAFD1-204ENST00000548092 PNMA3Q9UL41 463 aa8.97□□□□□ -0.97
TRAFD1-204ENST00000548092 NUDT18Q6ZVK8 323 aa8.96□□□□□ -0.98
TRAFD1-204ENST00000548092 PTGDRQ13258 359 aa8.94□□□□□ -0.98
TRAFD1-204ENST00000548092 SAMD7Q7Z3H4 446 aa8.94□□□□□ -0.98
TRAFD1-204ENST00000548092 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
TRAFD1-204ENST00000548092 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
TRAFD1-204ENST00000548092 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
TRAFD1-204ENST00000548092 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
TRAFD1-204ENST00000548092 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
TRAFD1-204ENST00000548092 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
TRAFD1-204ENST00000548092 NUTM2FA1L443 756 aa8.91□□□□□ -0.98
TRAFD1-204ENST00000548092 RBM26Q5T8P6 1007 aaKnown RBP8.91□□□□□ -0.98
TRAFD1-204ENST00000548092 TSR3Q9UJK0 312 aaKnown RBP8.91□□□□□ -0.98
TRAFD1-204ENST00000548092 EYA1Q99502 592 aa8.9□□□□□ -0.98
TRAFD1-204ENST00000548092 FAM161AQ3B820 660 aa8.88□□□□□ -0.99
TRAFD1-204ENST00000548092 VSIG10Q8N0Z9 540 aa8.88□□□□□ -0.99
TRAFD1-204ENST00000548092 ERCC6Q03468 1493 aa8.88□□□□□ -0.99
TRAFD1-204ENST00000548092 PPP4CP60510 307 aa8.87□□□□□ -0.99
TRAFD1-204ENST00000548092 IFFO2Q5TF58 517 aa8.87□□□□□ -0.99
TRAFD1-204ENST00000548092 SWT1Q5T5J6 900 aaKnown RBP8.86□□□□□ -0.99
TRAFD1-204ENST00000548092 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-204ENST00000548092 NYAP1Q6ZVC0 841 aa8.85□□□□□ -0.99
TRAFD1-204ENST00000548092 FECHP22830 423 aa8.84□□□□□ -0.99
TRAFD1-204ENST00000548092 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
TRAFD1-204ENST00000548092 FCHSD2O94868 740 aa8.83□□□□□ -1
TRAFD1-204ENST00000548092 MYO15BQ96JP2 1530 aa8.83□□□□□ -1
TRAFD1-204ENST00000548092 GPR37O15354 613 aa8.82□□□□□ -1
TRAFD1-204ENST00000548092 HDGFP51858 240 aaKnown RBP8.82□□□□□ -1
TRAFD1-204ENST00000548092 A0A0G2JS52 829 aa8.81□□□□□ -1
TRAFD1-204ENST00000548092 RNF40O75150 1001 aa8.81□□□□□ -1
TRAFD1-204ENST00000548092 SMYD5Q6GMV2 418 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms