RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 IRX2Q9BZI1 471 aaPredicted RBP7.83□□□□□ -1.16
DEPDC4-204ENST00000547823 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
DEPDC4-204ENST00000547823 EPAS1Q99814 870 aa7.81□□□□□ -1.16
DEPDC4-204ENST00000547823 PCDHGA10Q9Y5H3 936 aa7.81□□□□□ -1.16
DEPDC4-204ENST00000547823 EMILIN3Q9NT22 766 aa7.79□□□□□ -1.16
DEPDC4-204ENST00000547823 SOWAHBA6NEL2 793 aa7.77□□□□□ -1.17
DEPDC4-204ENST00000547823 CAMK2BQ13554 666 aa7.75□□□□□ -1.17
DEPDC4-204ENST00000547823 PROX2Q3B8N5 592 aa7.75□□□□□ -1.17
DEPDC4-204ENST00000547823 ZFRQ96KR1 1074 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-204ENST00000547823 DCAF8L2P0C7V8 631 aa7.74□□□□□ -1.17
DEPDC4-204ENST00000547823 COL9A1P20849 921 aa7.74□□□□□ -1.17
DEPDC4-204ENST00000547823 FAM98CQ17RN3 349 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-204ENST00000547823 C6orf132Q5T0Z8 1188 aa7.73□□□□□ -1.17
DEPDC4-204ENST00000547823 KIAA1468Q9P260 1216 aa7.73□□□□□ -1.17
DEPDC4-204ENST00000547823 TRIM6-TRIM34B2RNG4 842 aa7.72□□□□□ -1.17
DEPDC4-204ENST00000547823 BCAMP50895 628 aa7.72□□□□□ -1.17
DEPDC4-204ENST00000547823 KCNC4Q03721 635 aa7.72□□□□□ -1.17
DEPDC4-204ENST00000547823 LRCH3Q96II8 777 aa7.71□□□□□ -1.18
DEPDC4-204ENST00000547823 TSR3Q9UJK0 312 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-204ENST00000547823 LAPTM4AQ15012 233 aa7.7□□□□□ -1.18
DEPDC4-204ENST00000547823 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.7□□□□□ -1.18
DEPDC4-204ENST00000547823 DPYSL4O14531 572 aa7.68□□□□□ -1.18
DEPDC4-204ENST00000547823 PACS2Q86VP3 889 aa7.68□□□□□ -1.18
DEPDC4-204ENST00000547823 CADPS2Q86UW7 1296 aa7.67□□□□□ -1.18
DEPDC4-204ENST00000547823 WBP1LQ9NX94 342 aa7.67□□□□□ -1.18
DEPDC4-204ENST00000547823 SPDYE16A6NNV3 312 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-204ENST00000547823 EN1Q05925 392 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-204ENST00000547823 CERKQ8TCT0 537 aa7.66□□□□□ -1.18
DEPDC4-204ENST00000547823 SEPT9Q9UHD8 586 aaPredicted RBP7.66□□□□□ -1.18
DEPDC4-204ENST00000547823 PDIA6Q15084 440 aa7.65□□□□□ -1.18
DEPDC4-204ENST00000547823 HPS5Q9UPZ3 1129 aa7.65□□□□□ -1.18
DEPDC4-204ENST00000547823 Q6ZNB5 142 aa7.64□□□□□ -1.19
DEPDC4-204ENST00000547823 MAP3K7O43318 606 aa7.63□□□□□ -1.19
DEPDC4-204ENST00000547823 NBR1Q14596 966 aa7.63□□□□□ -1.19
DEPDC4-204ENST00000547823 NECTIN2Q92692 538 aa7.63□□□□□ -1.19
DEPDC4-204ENST00000547823 RBM33Q96EV2 1170 aaKnown RBP7.63□□□□□ -1.19
DEPDC4-204ENST00000547823 PPP4CP60510 307 aa7.62□□□□□ -1.19
DEPDC4-204ENST00000547823 DDX12PQ92771 950 aa7.62□□□□□ -1.19
DEPDC4-204ENST00000547823 NBPF26B4DH59 902 aa7.61□□□□□ -1.19
DEPDC4-204ENST00000547823 BBXQ8WY36 941 aaPredicted RBP7.61□□□□□ -1.19
DEPDC4-204ENST00000547823 RBM27Q9P2N5 1060 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-204ENST00000547823 HDGFP51858 240 aaKnown RBP7.58□□□□□ -1.2
DEPDC4-204ENST00000547823 PRSS12P56730 875 aa7.58□□□□□ -1.2
DEPDC4-204ENST00000547823 CDCA7LQ96GN5 454 aa7.58□□□□□ -1.2
DEPDC4-204ENST00000547823 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
DEPDC4-204ENST00000547823 ARIH1Q9Y4X5 557 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-204ENST00000547823 IL21Q9HBE4 155 aa7.57□□□□□ -1.2
DEPDC4-204ENST00000547823 TSR1Q2NL82 804 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-204ENST00000547823 SLC4A3P48751 1232 aa7.55□□□□□ -1.2
DEPDC4-204ENST00000547823 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
DEPDC4-204ENST00000547823 E2F4Q16254 413 aa7.54□□□□□ -1.2
DEPDC4-204ENST00000547823 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
DEPDC4-204ENST00000547823 SAMD7Q7Z3H4 446 aa7.54□□□□□ -1.2
DEPDC4-204ENST00000547823 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.54□□□□□ -1.2
DEPDC4-204ENST00000547823 NRG2O14511 850 aaPredicted RBP7.53□□□□□ -1.2
DEPDC4-204ENST00000547823 TATDN2Q93075 761 aa7.53□□□□□ -1.2
DEPDC4-204ENST00000547823 GFRA3O60609 400 aa7.52□□□□□ -1.21
DEPDC4-204ENST00000547823 GGCXP38435 758 aa7.52□□□□□ -1.21
DEPDC4-204ENST00000547823 SPRYD3Q8NCJ5 442 aa7.52□□□□□ -1.21
DEPDC4-204ENST00000547823 MTRQ99707 1265 aa7.52□□□□□ -1.21
DEPDC4-204ENST00000547823 WDR70Q9NW82 654 aa7.52□□□□□ -1.21
DEPDC4-204ENST00000547823 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
DEPDC4-204ENST00000547823 PRR14Q9BWN1 585 aa7.51□□□□□ -1.21
DEPDC4-204ENST00000547823 TRAF7Q6Q0C0 670 aa7.5□□□□□ -1.21
DEPDC4-204ENST00000547823 SLF2Q8IX21 1173 aa7.5□□□□□ -1.21
DEPDC4-204ENST00000547823 PRKD2Q9BZL6 878 aa7.5□□□□□ -1.21
DEPDC4-204ENST00000547823 GRXCR2A6NFK2 248 aa7.48□□□□□ -1.21
DEPDC4-204ENST00000547823 SMAPO00193 183 aa7.48□□□□□ -1.21
DEPDC4-204ENST00000547823 RNF40O75150 1001 aa7.48□□□□□ -1.21
DEPDC4-204ENST00000547823 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.48□□□□□ -1.21
DEPDC4-204ENST00000547823 PPP1R18Q6NYC8 613 aa7.47□□□□□ -1.21
DEPDC4-204ENST00000547823 TMUB1Q9BVT8 246 aa7.47□□□□□ -1.21
DEPDC4-204ENST00000547823 FAM198AQ9UFP1 575 aa7.47□□□□□ -1.21
DEPDC4-204ENST00000547823 NUDT18Q6ZVK8 323 aa7.46□□□□□ -1.22
DEPDC4-204ENST00000547823 OSBPP22059 807 aa7.45□□□□□ -1.22
DEPDC4-204ENST00000547823 APLP1P51693 650 aa7.44□□□□□ -1.22
DEPDC4-204ENST00000547823 TTC13Q8NBP0 860 aa7.44□□□□□ -1.22
DEPDC4-204ENST00000547823 PRIM1P49642 420 aaKnown RBP7.42□□□□□ -1.22
DEPDC4-204ENST00000547823 CDHR5Q9HBB8 845 aa7.42□□□□□ -1.22
DEPDC4-204ENST00000547823 SWT1Q5T5J6 900 aaKnown RBP7.41□□□□□ -1.22
DEPDC4-204ENST00000547823 ZNF516Q92618 1163 aa7.41□□□□□ -1.22
DEPDC4-204ENST00000547823 PDZRN3Q9UPQ7 1066 aa7.41□□□□□ -1.22
DEPDC4-204ENST00000547823 PADI6Q6TGC4 694 aa7.4□□□□□ -1.22
DEPDC4-204ENST00000547823 C3orf80F5H4A9 247 aa7.39□□□□□ -1.23
DEPDC4-204ENST00000547823 LCE2BO14633 110 aa7.39□□□□□ -1.23
DEPDC4-204ENST00000547823 ZPR1O75312 459 aa7.39□□□□□ -1.23
DEPDC4-204ENST00000547823 PCDHB3Q9Y5E6 796 aa7.38□□□□□ -1.23
DEPDC4-204ENST00000547823 COPS2P61201 443 aa7.37□□□□□ -1.23
DEPDC4-204ENST00000547823 EYA1Q99502 592 aa7.37□□□□□ -1.23
DEPDC4-204ENST00000547823 NPDC1Q9NQX5 325 aaPredicted RBP7.37□□□□□ -1.23
DEPDC4-204ENST00000547823 DNAJB2P25686 324 aa7.36□□□□□ -1.23
DEPDC4-204ENST00000547823 KMT5BQ4FZB7 885 aa7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 AMER1Q5JTC6 1135 aaPredicted RBP7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 ZNF787Q6DD87 383 aa7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 PAXIP1Q6ZW49 1069 aaPredicted RBP7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 NKX2-3Q8TAU0 364 aa7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 RBM46Q8TBY0 533 aaKnown RBP7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 CFAP44Q96MT7 982 aa7.35□□□□□ -1.23
DEPDC4-204ENST00000547823 ARHGEF1Q92888 912 aaKnown RBP7.34□□□□□ -1.23
DEPDC4-204ENST00000547823 PRR20EP86478 221 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms