RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	PROX2	Q3B8N5	592 aa		12.13	□□□□□ -0.47
LGR5-204	ENST00000547310	HS6ST3	Q8IZP7	471 aa		12.12	□□□□□ -0.47
LGR5-204	ENST00000547310	DCAF8L2	P0C7V8	631 aa		12.11	□□□□□ -0.47
LGR5-204	ENST00000547310	CRISPLD2	Q9H0B8	497 aa		12.11	□□□□□ -0.47
LGR5-204	ENST00000547310	DNAJC5	Q9H3Z4	198 aa		12.11	□□□□□ -0.47
LGR5-204	ENST00000547310		V9GY48	417 aa	Predicted RBP	12.11	□□□□□ -0.47
LGR5-204	ENST00000547310	PPP1R15B	Q5SWA1	713 aa		12.1	□□□□□ -0.47
LGR5-204	ENST00000547310	PRKD2	Q9BZL6	878 aa		12.1	□□□□□ -0.47
LGR5-204	ENST00000547310	TSR3	Q9UJK0	312 aa	Known RBP	12.09	□□□□□ -0.47
LGR5-204	ENST00000547310	COL9A1	P20849	921 aa		12.08	□□□□□ -0.48
LGR5-204	ENST00000547310	KIAA1468	Q9P260	1216 aa		12.08	□□□□□ -0.48
LGR5-204	ENST00000547310	CHGA	P10645	457 aa	Known RBP	12.06	□□□□□ -0.48
LGR5-204	ENST00000547310	PCDHGA10	Q9Y5H3	936 aa		12.04	□□□□□ -0.48
LGR5-204	ENST00000547310	FBXW7	Q969H0	707 aa		12.02	□□□□□ -0.49
LGR5-204	ENST00000547310	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.02	□□□□□ -0.49
LGR5-204	ENST00000547310	FAM98C	Q17RN3	349 aa	Known RBP	12.01	□□□□□ -0.49
LGR5-204	ENST00000547310	BBX	Q8WY36	941 aa	Predicted RBP	12.01	□□□□□ -0.49
LGR5-204	ENST00000547310	HPS5	Q9UPZ3	1129 aa		12	□□□□□ -0.49
LGR5-204	ENST00000547310	TJAP1	Q5JTD0	557 aa		11.99	□□□□□ -0.49
LGR5-204	ENST00000547310	PDE4A	P27815	886 aa		11.98	□□□□□ -0.49
LGR5-204	ENST00000547310	LRCH3	Q96II8	777 aa		11.98	□□□□□ -0.49
LGR5-204	ENST00000547310	TYW1B	Q6NUM6	668 aa		11.97	□□□□□ -0.49
LGR5-204	ENST00000547310	PDZRN3	Q9UPQ7	1066 aa		11.97	□□□□□ -0.49
LGR5-204	ENST00000547310	MAP3K9	P80192	1104 aa		11.96	□□□□□ -0.49
LGR5-204	ENST00000547310	PPP1R18	Q6NYC8	613 aa		11.96	□□□□□ -0.49
LGR5-204	ENST00000547310	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.96	□□□□□ -0.49
LGR5-204	ENST00000547310	PHF14	O94880	888 aa		11.95	□□□□□ -0.5
LGR5-204	ENST00000547310	NCKAP5L	Q9HCH0	1330 aa		11.93	□□□□□ -0.5
LGR5-204	ENST00000547310	TRIM6-TRIM34	B2RNG4	842 aa		11.92	□□□□□ -0.5
LGR5-204	ENST00000547310	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.91	□□□□□ -0.5
LGR5-204	ENST00000547310	PPP4C	P60510	307 aa		11.9	□□□□□ -0.5
LGR5-204	ENST00000547310	NKX1-1	Q15270	411 aa	Predicted RBP	11.9	□□□□□ -0.5
LGR5-204	ENST00000547310	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.9	□□□□□ -0.5
LGR5-204	ENST00000547310	C6orf132	Q5T0Z8	1188 aa		11.89	□□□□□ -0.51
LGR5-204	ENST00000547310	IL21	Q9HBE4	155 aa		11.89	□□□□□ -0.51
LGR5-204	ENST00000547310	RYDEN	Q9NUL5	291 aa	Known RBP	11.88	□□□□□ -0.51
LGR5-204	ENST00000547310	MTR	Q99707	1265 aa		11.85	□□□□□ -0.51
LGR5-204	ENST00000547310	EPAS1	Q99814	870 aa		11.84	□□□□□ -0.51
LGR5-204	ENST00000547310	LCE2A	Q5TA79	106 aa	Predicted RBP	11.83	□□□□□ -0.52
LGR5-204	ENST00000547310	DDX27	Q96GQ7	796 aa	Known RBP	11.83	□□□□□ -0.52
LGR5-204	ENST00000547310	GTPBP6	O43824	516 aa	Predicted RBP	11.82	□□□□□ -0.52
LGR5-204	ENST00000547310	EMILIN3	Q9NT22	766 aa		11.82	□□□□□ -0.52
LGR5-204	ENST00000547310	SPRYD3	Q8NCJ5	442 aa		11.81	□□□□□ -0.52
LGR5-204	ENST00000547310	PLCB2	Q00722	1185 aa		11.8	□□□□□ -0.52
LGR5-204	ENST00000547310	MFSD10	Q14728	455 aa		11.8	□□□□□ -0.52
LGR5-204	ENST00000547310	TREML4	Q6UXN2	200 aa		11.8	□□□□□ -0.52
LGR5-204	ENST00000547310	LARP6	Q9BRS8	491 aa	Known RBP	11.8	□□□□□ -0.52
LGR5-204	ENST00000547310	PACS2	Q86VP3	889 aa		11.79	□□□□□ -0.52
LGR5-204	ENST00000547310	DGAT1	O75907	488 aa		11.77	□□□□□ -0.53
LGR5-204	ENST00000547310	MYT1	Q01538	1121 aa		11.77	□□□□□ -0.53
LGR5-204	ENST00000547310	ZNF516	Q92618	1163 aa		11.77	□□□□□ -0.53
LGR5-204	ENST00000547310	TMUB1	Q9BVT8	246 aa		11.77	□□□□□ -0.53
LGR5-204	ENST00000547310	GGCX	P38435	758 aa		11.76	□□□□□ -0.53
LGR5-204	ENST00000547310	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.76	□□□□□ -0.53
LGR5-204	ENST00000547310	POTEC	B2RU33	542 aa		11.75	□□□□□ -0.53
LGR5-204	ENST00000547310	TRIM67	Q6ZTA4	783 aa		11.75	□□□□□ -0.53
LGR5-204	ENST00000547310	PKDCC	Q504Y2	493 aa		11.73	□□□□□ -0.53
LGR5-204	ENST00000547310	SAMD7	Q7Z3H4	446 aa		11.72	□□□□□ -0.53
LGR5-204	ENST00000547310	CFAP44	Q96MT7	982 aa		11.72	□□□□□ -0.53
LGR5-204	ENST00000547310	TSKS	Q9UJT2	592 aa		11.72	□□□□□ -0.53
LGR5-204	ENST00000547310	PRR20E	P86478	221 aa		11.68	□□□□□ -0.54
LGR5-204	ENST00000547310	PRR20C	P86479	221 aa		11.68	□□□□□ -0.54
LGR5-204	ENST00000547310	PRR20D	P86480	221 aa		11.68	□□□□□ -0.54
LGR5-204	ENST00000547310	PRR20B	P86481	221 aa		11.68	□□□□□ -0.54
LGR5-204	ENST00000547310	PRR20A	P86496	221 aa		11.68	□□□□□ -0.54
LGR5-204	ENST00000547310	NKX2-3	Q8TAU0	364 aa		11.68	□□□□□ -0.54
LGR5-204	ENST00000547310	STK17A	Q9UEE5	414 aa		11.66	□□□□□ -0.54
LGR5-204	ENST00000547310	RBM33	Q96EV2	1170 aa	Known RBP	11.64	□□□□□ -0.55
LGR5-204	ENST00000547310	SLC19A1	P41440	591 aa		11.63	□□□□□ -0.55
LGR5-204	ENST00000547310	APLP1	P51693	650 aa		11.63	□□□□□ -0.55
LGR5-204	ENST00000547310	SPRYD7	Q5W111	196 aa		11.6	□□□□□ -0.55
LGR5-204	ENST00000547310	ZNF598	Q86UK7	904 aa	Known RBP	11.6	□□□□□ -0.55
LGR5-204	ENST00000547310	LOC100996750	A0A140TA64	210 aa		11.59	□□□□□ -0.55
LGR5-204	ENST00000547310	NECTIN2	Q92692	538 aa		11.59	□□□□□ -0.55
LGR5-204	ENST00000547310	KRTAP4-6	Q9BYQ5	205 aa		11.59	□□□□□ -0.55
LGR5-204	ENST00000547310	SMAP	O00193	183 aa		11.58	□□□□□ -0.56
LGR5-204	ENST00000547310	EN1	Q05925	392 aa	Predicted RBP	11.58	□□□□□ -0.56
LGR5-204	ENST00000547310	EMID1	Q96A84	441 aa	Predicted RBP	11.58	□□□□□ -0.56
LGR5-204	ENST00000547310	CDCA7L	Q96GN5	454 aa		11.58	□□□□□ -0.56
LGR5-204	ENST00000547310	HDGF	P51858	240 aa	Known RBP	11.57	□□□□□ -0.56
LGR5-204	ENST00000547310	PRSS12	P56730	875 aa		11.57	□□□□□ -0.56
LGR5-204	ENST00000547310	CAMK2B	Q13554	666 aa		11.57	□□□□□ -0.56
LGR5-204	ENST00000547310	TATDN2	Q93075	761 aa		11.56	□□□□□ -0.56
LGR5-204	ENST00000547310	ZPR1	O75312	459 aa		11.55	□□□□□ -0.56
LGR5-204	ENST00000547310	TSHZ2	Q9NRE2	1034 aa		11.55	□□□□□ -0.56
LGR5-204	ENST00000547310	FAM198A	Q9UFP1	575 aa		11.55	□□□□□ -0.56
LGR5-204	ENST00000547310	RNF223	E7ERA6	249 aa		11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	WIPF1	O43516	503 aa		11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	SLC24A1	O60721	1099 aa		11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	WFS1	O76024	890 aa		11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	TSR1	Q2NL82	804 aa	Known RBP	11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	CERK	Q8TCT0	537 aa		11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	AAAS	Q9NRG9	546 aa		11.54	□□□□□ -0.56
LGR5-204	ENST00000547310	NBPF26	B4DH59	902 aa		11.53	□□□□□ -0.56
LGR5-204	ENST00000547310	HAP1	P54257	671 aa	Predicted RBP	11.53	□□□□□ -0.56
LGR5-204	ENST00000547310	DDX12P	Q92771	950 aa		11.53	□□□□□ -0.56
LGR5-204	ENST00000547310	FAM187A	A6NFU0	413 aa		11.52	□□□□□ -0.57
LGR5-204	ENST00000547310	GDF9	O60383	454 aa		11.52	□□□□□ -0.57
LGR5-204	ENST00000547310	COPS2	P61201	443 aa		11.52	□□□□□ -0.57
LGR5-204	ENST00000547310	INSM1	Q01101	510 aa	Predicted RBP	11.52	□□□□□ -0.57

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