RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 PCDHGA10Q9Y5H3 936 aa8.94□□□□□ -0.98
HCFC2-203ENST00000547194 NCKAP5LQ9HCH0 1330 aa8.94□□□□□ -0.98
HCFC2-203ENST00000547194 PDE4AP27815 886 aa8.93□□□□□ -0.98
HCFC2-203ENST00000547194 LAPTM4AQ15012 233 aa8.92□□□□□ -0.98
HCFC2-203ENST00000547194 LARP6Q9BRS8 491 aaKnown RBP8.92□□□□□ -0.98
HCFC2-203ENST00000547194 HPS5Q9UPZ3 1129 aa8.92□□□□□ -0.98
HCFC2-203ENST00000547194 NKX1-1Q15270 411 aaPredicted RBP8.91□□□□□ -0.98
HCFC2-203ENST00000547194 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.98
HCFC2-203ENST00000547194 LAPTM4BQ86VI4 370 aa8.9□□□□□ -0.98
HCFC2-203ENST00000547194 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
HCFC2-203ENST00000547194 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
HCFC2-203ENST00000547194 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
HCFC2-203ENST00000547194 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
HCFC2-203ENST00000547194 LRCH3Q96II8 777 aa8.87□□□□□ -0.99
HCFC2-203ENST00000547194 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
HCFC2-203ENST00000547194 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
HCFC2-203ENST00000547194 EMILIN3Q9NT22 766 aa8.86□□□□□ -0.99
HCFC2-203ENST00000547194 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
HCFC2-203ENST00000547194 FBXW7Q969H0 707 aa8.84□□□□□ -0.99
HCFC2-203ENST00000547194 FAM98CQ17RN3 349 aaKnown RBP8.83□□□□□ -1
HCFC2-203ENST00000547194 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
HCFC2-203ENST00000547194 TRIM6-TRIM34B2RNG4 842 aa8.82□□□□□ -1
HCFC2-203ENST00000547194 NRG2O14511 850 aaPredicted RBP8.82□□□□□ -1
HCFC2-203ENST00000547194 PHF14O94880 888 aa8.82□□□□□ -1
HCFC2-203ENST00000547194 C6orf132Q5T0Z8 1188 aa8.82□□□□□ -1
HCFC2-203ENST00000547194 PPP4CP60510 307 aa8.81□□□□□ -1
HCFC2-203ENST00000547194 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
HCFC2-203ENST00000547194 ZNF775Q96BV0 537 aaPredicted RBP8.77□□□□□ -1.01
HCFC2-203ENST00000547194 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
HCFC2-203ENST00000547194 SMAPO00193 183 aa8.76□□□□□ -1.01
HCFC2-203ENST00000547194 RNF40O75150 1001 aa8.76□□□□□ -1.01
HCFC2-203ENST00000547194 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
HCFC2-203ENST00000547194 DDX12PQ92771 950 aa8.76□□□□□ -1.01
HCFC2-203ENST00000547194 MTRQ99707 1265 aa8.76□□□□□ -1.01
HCFC2-203ENST00000547194 ONECUT3O60422 494 aaPredicted RBP8.75□□□□□ -1.01
HCFC2-203ENST00000547194 MFSD10Q14728 455 aa8.74□□□□□ -1.01
HCFC2-203ENST00000547194 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
HCFC2-203ENST00000547194 EPAS1Q99814 870 aa8.74□□□□□ -1.01
HCFC2-203ENST00000547194 DPYSL4O14531 572 aa8.73□□□□□ -1.01
HCFC2-203ENST00000547194 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
HCFC2-203ENST00000547194 TSKSQ9UJT2 592 aa8.73□□□□□ -1.01
HCFC2-203ENST00000547194 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
HCFC2-203ENST00000547194 IL21Q9HBE4 155 aa8.72□□□□□ -1.01
HCFC2-203ENST00000547194 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.72□□□□□ -1.01
HCFC2-203ENST00000547194 TSR1Q2NL82 804 aaKnown RBP8.71□□□□□ -1.02
HCFC2-203ENST00000547194 V9GY48 417 aaPredicted RBP8.71□□□□□ -1.02
HCFC2-203ENST00000547194 MAP3K7O43318 606 aa8.7□□□□□ -1.02
HCFC2-203ENST00000547194 GTPBP6O43824 516 aaPredicted RBP8.7□□□□□ -1.02
HCFC2-203ENST00000547194 DNAJC5Q9H3Z4 198 aa8.7□□□□□ -1.02
HCFC2-203ENST00000547194 NBR1Q14596 966 aa8.69□□□□□ -1.02
HCFC2-203ENST00000547194 NKX2-3Q8TAU0 364 aa8.69□□□□□ -1.02
HCFC2-203ENST00000547194 CADPS2Q86UW7 1296 aa8.68□□□□□ -1.02
HCFC2-203ENST00000547194 COPS2P61201 443 aa8.66□□□□□ -1.02
HCFC2-203ENST00000547194 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
HCFC2-203ENST00000547194 C3orf80F5H4A9 247 aa8.63□□□□□ -1.03
HCFC2-203ENST00000547194 APLP1P51693 650 aa8.63□□□□□ -1.03
HCFC2-203ENST00000547194 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
HCFC2-203ENST00000547194 CDCA7LQ96GN5 454 aa8.63□□□□□ -1.03
HCFC2-203ENST00000547194 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
HCFC2-203ENST00000547194 GGCXP38435 758 aa8.62□□□□□ -1.03
HCFC2-203ENST00000547194 PKDCCQ504Y2 493 aa8.62□□□□□ -1.03
HCFC2-203ENST00000547194 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
HCFC2-203ENST00000547194 POTECB2RU33 542 aa8.61□□□□□ -1.03
HCFC2-203ENST00000547194 TATDN2Q93075 761 aa8.6□□□□□ -1.03
HCFC2-203ENST00000547194 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
HCFC2-203ENST00000547194 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
HCFC2-203ENST00000547194 PRSS12P56730 875 aa8.59□□□□□ -1.03
HCFC2-203ENST00000547194 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
HCFC2-203ENST00000547194 MYT1Q01538 1121 aa8.56□□□□□ -1.04
HCFC2-203ENST00000547194 CAMK2BQ13554 666 aa8.56□□□□□ -1.04
HCFC2-203ENST00000547194 TRIM67Q6ZTA4 783 aa8.55□□□□□ -1.04
HCFC2-203ENST00000547194 FAM187AA6NFU0 413 aa8.54□□□□□ -1.04
HCFC2-203ENST00000547194 SLC19A1P41440 591 aa8.54□□□□□ -1.04
HCFC2-203ENST00000547194 GRXCR2A6NFK2 248 aa8.53□□□□□ -1.04
HCFC2-203ENST00000547194 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
HCFC2-203ENST00000547194 TNFRSF10AO00220 468 aa8.52□□□□□ -1.05
HCFC2-203ENST00000547194 PRIM1P49642 420 aaKnown RBP8.52□□□□□ -1.05
HCFC2-203ENST00000547194 CDHR5Q9HBB8 845 aa8.52□□□□□ -1.05
HCFC2-203ENST00000547194 RNF223E7ERA6 249 aa8.51□□□□□ -1.05
HCFC2-203ENST00000547194 ZPR1O75312 459 aa8.51□□□□□ -1.05
HCFC2-203ENST00000547194 PPEF1O14829 653 aaPredicted RBP8.5□□□□□ -1.05
HCFC2-203ENST00000547194 ST8SIA5O15466 376 aa8.5□□□□□ -1.05
HCFC2-203ENST00000547194 TLL1O43897 1013 aa8.5□□□□□ -1.05
HCFC2-203ENST00000547194 DGAT1O75907 488 aa8.5□□□□□ -1.05
HCFC2-203ENST00000547194 EMID1Q96A84 441 aaPredicted RBP8.49□□□□□ -1.05
HCFC2-203ENST00000547194 TMUB1Q9BVT8 246 aa8.49□□□□□ -1.05
HCFC2-203ENST00000547194 PDIA6Q15084 440 aa8.48□□□□□ -1.05
HCFC2-203ENST00000547194 SLF2Q8IX21 1173 aa8.48□□□□□ -1.05
HCFC2-203ENST00000547194 CERKQ8TCT0 537 aa8.48□□□□□ -1.05
HCFC2-203ENST00000547194 PCDHB3Q9Y5E6 796 aa8.48□□□□□ -1.05
HCFC2-203ENST00000547194 ZNF697Q5TEC3 545 aa8.47□□□□□ -1.05
HCFC2-203ENST00000547194 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
HCFC2-203ENST00000547194 BLOC1S3Q6QNY0 202 aa8.47□□□□□ -1.05
HCFC2-203ENST00000547194 AMER1Q5JTC6 1135 aaPredicted RBP8.46□□□□□ -1.06
HCFC2-203ENST00000547194 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
HCFC2-203ENST00000547194 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.06
HCFC2-203ENST00000547194 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
HCFC2-203ENST00000547194 S1PR4O95977 384 aa8.44□□□□□ -1.06
HCFC2-203ENST00000547194 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
HCFC2-203ENST00000547194 PADI6Q6TGC4 694 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms