RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 PDIA6Q15084 440 aa9.26□□□□□ -0.93
RAB3IP-209ENST00000547055 DDX12PQ92771 950 aa9.26□□□□□ -0.93
RAB3IP-209ENST00000547055 EPAS1Q99814 870 aa9.26□□□□□ -0.93
RAB3IP-209ENST00000547055 SLC4A5Q9BY07 1137 aa9.26□□□□□ -0.93
RAB3IP-209ENST00000547055 SPDYE16A6NNV3 312 aaPredicted RBP9.25□□□□□ -0.93
RAB3IP-209ENST00000547055 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
RAB3IP-209ENST00000547055 ZBED2Q9BTP6 218 aa9.25□□□□□ -0.93
RAB3IP-209ENST00000547055 ARIH1Q9Y4X5 557 aaPredicted RBP9.24□□□□□ -0.93
RAB3IP-209ENST00000547055 A0A0G2JS52 829 aa9.23□□□□□ -0.93
RAB3IP-209ENST00000547055 PPP1R3GB7ZBB8 358 aa9.22□□□□□ -0.93
RAB3IP-209ENST00000547055 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
RAB3IP-209ENST00000547055 COL9A1P20849 921 aa9.21□□□□□ -0.94
RAB3IP-209ENST00000547055 NBR1Q14596 966 aa9.21□□□□□ -0.94
RAB3IP-209ENST00000547055 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
RAB3IP-209ENST00000547055 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
RAB3IP-209ENST00000547055 Q6ZNB5 142 aa9.19□□□□□ -0.94
RAB3IP-209ENST00000547055 GRXCR2A6NFK2 248 aa9.18□□□□□ -0.94
RAB3IP-209ENST00000547055 BHMG1C9JSJ3 638 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-209ENST00000547055 PROX2Q3B8N5 592 aa9.18□□□□□ -0.94
RAB3IP-209ENST00000547055 MRPL50Q8N5N7 158 aaKnown RBP9.18□□□□□ -0.94
RAB3IP-209ENST00000547055 MAP3K7O43318 606 aa9.17□□□□□ -0.94
RAB3IP-209ENST00000547055 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
RAB3IP-209ENST00000547055 NBPF3Q9H094 633 aa9.17□□□□□ -0.94
RAB3IP-209ENST00000547055 GOLGA8CPA6NN73 597 aa9.16□□□□□ -0.94
RAB3IP-209ENST00000547055 TSR1Q2NL82 804 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-209ENST00000547055 RABGEF1Q9UJ41 708 aa9.15□□□□□ -0.94
RAB3IP-209ENST00000547055 KCNV2Q8TDN2 545 aa9.14□□□□□ -0.95
RAB3IP-209ENST00000547055 PTPN5P54829 565 aa9.13□□□□□ -0.95
RAB3IP-209ENST00000547055 ARHGEF1Q92888 912 aaKnown RBP9.13□□□□□ -0.95
RAB3IP-209ENST00000547055 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
RAB3IP-209ENST00000547055 WNT2BQ93097 391 aa9.12□□□□□ -0.95
RAB3IP-209ENST00000547055 TRIM6-TRIM34B2RNG4 842 aa9.11□□□□□ -0.95
RAB3IP-209ENST00000547055 ONECUT3O60422 494 aaPredicted RBP9.11□□□□□ -0.95
RAB3IP-209ENST00000547055 LCE2BO14633 110 aa9.1□□□□□ -0.95
RAB3IP-209ENST00000547055 OSBPP22059 807 aa9.1□□□□□ -0.95
RAB3IP-209ENST00000547055 PRIM1P49642 420 aaKnown RBP9.1□□□□□ -0.95
RAB3IP-209ENST00000547055 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
RAB3IP-209ENST00000547055 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
RAB3IP-209ENST00000547055 THSD4Q6ZMP0 1018 aa9.08□□□□□ -0.96
RAB3IP-209ENST00000547055 LAPTM4BQ86VI4 370 aa9.07□□□□□ -0.96
RAB3IP-209ENST00000547055 CERKQ8TCT0 537 aa9.07□□□□□ -0.96
RAB3IP-209ENST00000547055 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
RAB3IP-209ENST00000547055 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
RAB3IP-209ENST00000547055 ANKK1Q8NFD2 765 aa9.06□□□□□ -0.96
RAB3IP-209ENST00000547055 MLLT3P42568 568 aaPredicted RBP9.05□□□□□ -0.96
RAB3IP-209ENST00000547055 PRSS12P56730 875 aa9.05□□□□□ -0.96
RAB3IP-209ENST00000547055 CDCA7LQ96GN5 454 aa9.05□□□□□ -0.96
RAB3IP-209ENST00000547055 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
RAB3IP-209ENST00000547055 TSKSQ9UJT2 592 aa9.05□□□□□ -0.96
RAB3IP-209ENST00000547055 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
RAB3IP-209ENST00000547055 FAM98CQ17RN3 349 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-209ENST00000547055 BCAMP50895 628 aa9.01□□□□□ -0.97
RAB3IP-209ENST00000547055 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
RAB3IP-209ENST00000547055 FAM198AQ9UFP1 575 aa9□□□□□ -0.97
RAB3IP-209ENST00000547055 SMAPO00193 183 aa8.99□□□□□ -0.97
RAB3IP-209ENST00000547055 NBPF26B4DH59 902 aa8.98□□□□□ -0.97
RAB3IP-209ENST00000547055 SEMA3EO15041 775 aa8.98□□□□□ -0.97
RAB3IP-209ENST00000547055 NPDC1Q9NQX5 325 aaPredicted RBP8.98□□□□□ -0.97
RAB3IP-209ENST00000547055 RBM27Q9P2N5 1060 aaKnown RBP8.98□□□□□ -0.97
RAB3IP-209ENST00000547055 PNMA3Q9UL41 463 aa8.98□□□□□ -0.97
RAB3IP-209ENST00000547055 TATDN2Q93075 761 aa8.97□□□□□ -0.97
RAB3IP-209ENST00000547055 LRCH3Q96II8 777 aa8.97□□□□□ -0.97
RAB3IP-209ENST00000547055 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.97□□□□□ -0.97
RAB3IP-209ENST00000547055 TRAF7Q6Q0C0 670 aa8.96□□□□□ -0.98
RAB3IP-209ENST00000547055 PADI6Q6TGC4 694 aa8.96□□□□□ -0.98
RAB3IP-209ENST00000547055 C3orf80F5H4A9 247 aa8.95□□□□□ -0.98
RAB3IP-209ENST00000547055 NUDT18Q6ZVK8 323 aa8.95□□□□□ -0.98
RAB3IP-209ENST00000547055 KDM2AQ9Y2K7 1162 aa8.95□□□□□ -0.98
RAB3IP-209ENST00000547055 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
RAB3IP-209ENST00000547055 WBP1LQ9NX94 342 aa8.94□□□□□ -0.98
RAB3IP-209ENST00000547055 LAPTM4AQ15012 233 aa8.93□□□□□ -0.98
RAB3IP-209ENST00000547055 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
RAB3IP-209ENST00000547055 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
RAB3IP-209ENST00000547055 HPS5Q9UPZ3 1129 aa8.93□□□□□ -0.98
RAB3IP-209ENST00000547055 PTGDRQ13258 359 aa8.92□□□□□ -0.98
RAB3IP-209ENST00000547055 SAMD7Q7Z3H4 446 aa8.92□□□□□ -0.98
RAB3IP-209ENST00000547055 TTC13Q8NBP0 860 aa8.92□□□□□ -0.98
RAB3IP-209ENST00000547055 ITGBL1O95965 494 aaPredicted RBP8.91□□□□□ -0.98
RAB3IP-209ENST00000547055 HDGFP51858 240 aaKnown RBP8.91□□□□□ -0.98
RAB3IP-209ENST00000547055 TESPA1A2RU30 521 aaPredicted RBP8.9□□□□□ -0.98
RAB3IP-209ENST00000547055 PPP4CP60510 307 aa8.9□□□□□ -0.98
RAB3IP-209ENST00000547055 SMYD5Q6GMV2 418 aa8.9□□□□□ -0.98
RAB3IP-209ENST00000547055 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
RAB3IP-209ENST00000547055 RNF40O75150 1001 aa8.88□□□□□ -0.99
RAB3IP-209ENST00000547055 FCHSD2O94868 740 aa8.87□□□□□ -0.99
RAB3IP-209ENST00000547055 RBM26Q5T8P6 1007 aaKnown RBP8.86□□□□□ -0.99
RAB3IP-209ENST00000547055 EYA1Q99502 592 aa8.86□□□□□ -0.99
RAB3IP-209ENST00000547055 GFRA3O60609 400 aa8.85□□□□□ -0.99
RAB3IP-209ENST00000547055 SWT1Q5T5J6 900 aaKnown RBP8.84□□□□□ -0.99
RAB3IP-209ENST00000547055 RBM46Q8TBY0 533 aaKnown RBP8.83□□□□□ -1
RAB3IP-209ENST00000547055 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
RAB3IP-209ENST00000547055 ADGRG1Q9Y653 693 aa8.83□□□□□ -1
RAB3IP-209ENST00000547055 SLC4A3P48751 1232 aa8.82□□□□□ -1
RAB3IP-209ENST00000547055 KCNC4Q03721 635 aa8.82□□□□□ -1
RAB3IP-209ENST00000547055 FAM161AQ3B820 660 aa8.82□□□□□ -1
RAB3IP-209ENST00000547055 SLF2Q8IX21 1173 aa8.82□□□□□ -1
RAB3IP-209ENST00000547055 HIC1Q14526 733 aa8.81□□□□□ -1
RAB3IP-209ENST00000547055 DNAJB2P25686 324 aa8.8□□□□□ -1
RAB3IP-209ENST00000547055 ZNF787Q6DD87 383 aa8.8□□□□□ -1
RAB3IP-209ENST00000547055 NECTIN2Q92692 538 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms