RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 DDX12PQ92771 950 aa14.37□□□□□ -0.11
CHPT1-203ENST00000546873 SLC4A5Q9BY07 1137 aa14.33□□□□□ -0.12
CHPT1-203ENST00000546873 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
CHPT1-203ENST00000546873 VPS9D1Q9Y2B5 631 aa14.32□□□□□ -0.12
CHPT1-203ENST00000546873 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
CHPT1-203ENST00000546873 NBR1Q14596 966 aa14.31□□□□□ -0.12
CHPT1-203ENST00000546873 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
CHPT1-203ENST00000546873 RBM33Q96EV2 1170 aaKnown RBP14.3□□□□□ -0.12
CHPT1-203ENST00000546873 HRO43593 1189 aa14.29□□□□□ -0.12
CHPT1-203ENST00000546873 ARHGEF1Q92888 912 aaKnown RBP14.29□□□□□ -0.12
CHPT1-203ENST00000546873 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
CHPT1-203ENST00000546873 GRXCR2A6NFK2 248 aa14.28□□□□□ -0.12
CHPT1-203ENST00000546873 C6orf132Q5T0Z8 1188 aa14.28□□□□□ -0.12
CHPT1-203ENST00000546873 MAP3K7O43318 606 aa14.26□□□□□ -0.13
CHPT1-203ENST00000546873 KCNV2Q8TDN2 545 aa14.25□□□□□ -0.13
CHPT1-203ENST00000546873 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
CHPT1-203ENST00000546873 EN1Q05925 392 aaPredicted RBP14.24□□□□□ -0.13
CHPT1-203ENST00000546873 GOLGA8CPA6NN73 597 aa14.23□□□□□ -0.13
CHPT1-203ENST00000546873 COL9A1P20849 921 aa14.22□□□□□ -0.13
CHPT1-203ENST00000546873 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
CHPT1-203ENST00000546873 RABGEF1Q9UJ41 708 aa14.18□□□□□ -0.14
CHPT1-203ENST00000546873 KCTD12Q96CX2 325 aaKnown RBP14.17□□□□□ -0.14
CHPT1-203ENST00000546873 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
CHPT1-203ENST00000546873 PROX2Q3B8N5 592 aa14.16□□□□□ -0.14
CHPT1-203ENST00000546873 BHMG1C9JSJ3 638 aaPredicted RBP14.15□□□□□ -0.14
CHPT1-203ENST00000546873 ONECUT3O60422 494 aaPredicted RBP14.15□□□□□ -0.14
CHPT1-203ENST00000546873 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
CHPT1-203ENST00000546873 CCDC180Q9P1Z9 1646 aa14.15□□□□□ -0.14
CHPT1-203ENST00000546873 TSR1Q2NL82 804 aaKnown RBP14.14□□□□□ -0.15
CHPT1-203ENST00000546873 OSBPP22059 807 aa14.13□□□□□ -0.15
CHPT1-203ENST00000546873 KIAA1468Q9P260 1216 aa14.12□□□□□ -0.15
CHPT1-203ENST00000546873 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
CHPT1-203ENST00000546873 PACS2Q86VP3 889 aa14.1□□□□□ -0.15
CHPT1-203ENST00000546873 WNT2BQ93097 391 aa14.1□□□□□ -0.15
CHPT1-203ENST00000546873 LAPTM4BQ86VI4 370 aa14.09□□□□□ -0.15
CHPT1-203ENST00000546873 ANKK1Q8NFD2 765 aa14.06□□□□□ -0.16
CHPT1-203ENST00000546873 MLLT3P42568 568 aaPredicted RBP14.05□□□□□ -0.16
CHPT1-203ENST00000546873 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
CHPT1-203ENST00000546873 PRSS12P56730 875 aa14.05□□□□□ -0.16
CHPT1-203ENST00000546873 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
CHPT1-203ENST00000546873 CDCA7LQ96GN5 454 aa14.05□□□□□ -0.16
CHPT1-203ENST00000546873 PTPN5P54829 565 aa14.03□□□□□ -0.16
CHPT1-203ENST00000546873 THSD4Q6ZMP0 1018 aa14.02□□□□□ -0.17
CHPT1-203ENST00000546873 CDHR5Q9HBB8 845 aa14.01□□□□□ -0.17
CHPT1-203ENST00000546873 SEPT9Q9UHD8 586 aaPredicted RBP14.01□□□□□ -0.17
CHPT1-203ENST00000546873 FAM98CQ17RN3 349 aaKnown RBP14□□□□□ -0.17
CHPT1-203ENST00000546873 SMYD5Q6GMV2 418 aa14□□□□□ -0.17
CHPT1-203ENST00000546873 TSKSQ9UJT2 592 aa14□□□□□ -0.17
CHPT1-203ENST00000546873 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
CHPT1-203ENST00000546873 SEMA3EO15041 775 aa13.99□□□□□ -0.17
CHPT1-203ENST00000546873 ZFRQ96KR1 1074 aaKnown RBP13.99□□□□□ -0.17
CHPT1-203ENST00000546873 RBM27Q9P2N5 1060 aaKnown RBP13.99□□□□□ -0.17
CHPT1-203ENST00000546873 NBPF26B4DH59 902 aa13.98□□□□□ -0.17
CHPT1-203ENST00000546873 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
CHPT1-203ENST00000546873 PNMA3Q9UL41 463 aa13.93□□□□□ -0.18
CHPT1-203ENST00000546873 TATDN2Q93075 761 aa13.92□□□□□ -0.18
CHPT1-203ENST00000546873 LRCH3Q96II8 777 aa13.92□□□□□ -0.18
CHPT1-203ENST00000546873 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.92□□□□□ -0.18
CHPT1-203ENST00000546873 PLA2G2EQ9NZK7 142 aa13.92□□□□□ -0.18
CHPT1-203ENST00000546873 SOWAHBA6NEL2 793 aa13.91□□□□□ -0.18
CHPT1-203ENST00000546873 HDGFP51858 240 aaKnown RBP13.91□□□□□ -0.18
CHPT1-203ENST00000546873 NPDC1Q9NQX5 325 aaPredicted RBP13.91□□□□□ -0.18
CHPT1-203ENST00000546873 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
CHPT1-203ENST00000546873 SMAPO00193 183 aa13.9□□□□□ -0.18
CHPT1-203ENST00000546873 BCAMP50895 628 aa13.9□□□□□ -0.18
CHPT1-203ENST00000546873 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
CHPT1-203ENST00000546873 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.18
CHPT1-203ENST00000546873 NUDT18Q6ZVK8 323 aa13.88□□□□□ -0.19
CHPT1-203ENST00000546873 FCHSD2O94868 740 aa13.86□□□□□ -0.19
CHPT1-203ENST00000546873 PTGDRQ13258 359 aa13.86□□□□□ -0.19
CHPT1-203ENST00000546873 NYAP1Q6ZVC0 841 aa13.86□□□□□ -0.19
CHPT1-203ENST00000546873 TULP1O00294 542 aaPredicted RBP13.85□□□□□ -0.19
CHPT1-203ENST00000546873 TTC13Q8NBP0 860 aa13.85□□□□□ -0.19
CHPT1-203ENST00000546873 TSR3Q9UJK0 312 aaKnown RBP13.84□□□□□ -0.19
CHPT1-203ENST00000546873 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.2
CHPT1-203ENST00000546873 SLC4A3P48751 1232 aa13.82□□□□□ -0.2
CHPT1-203ENST00000546873 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
CHPT1-203ENST00000546873 PPP4CP60510 307 aa13.8□□□□□ -0.2
CHPT1-203ENST00000546873 RBM26Q5T8P6 1007 aaKnown RBP13.8□□□□□ -0.2
CHPT1-203ENST00000546873 WBP1LQ9NX94 342 aa13.8□□□□□ -0.2
CHPT1-203ENST00000546873 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
CHPT1-203ENST00000546873 C3orf80F5H4A9 247 aa13.78□□□□□ -0.2
CHPT1-203ENST00000546873 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
CHPT1-203ENST00000546873 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
CHPT1-203ENST00000546873 RNF40O75150 1001 aa13.77□□□□□ -0.21
CHPT1-203ENST00000546873 HIC1Q14526 733 aa13.76□□□□□ -0.21
CHPT1-203ENST00000546873 SLF2Q8IX21 1173 aa13.73□□□□□ -0.21
CHPT1-203ENST00000546873 EYA1Q99502 592 aa13.73□□□□□ -0.21
CHPT1-203ENST00000546873 DNAJB2P25686 324 aa13.71□□□□□ -0.21
CHPT1-203ENST00000546873 SWT1Q5T5J6 900 aaKnown RBP13.71□□□□□ -0.21
CHPT1-203ENST00000546873 ADGRG1Q9Y653 693 aa13.71□□□□□ -0.21
CHPT1-203ENST00000546873 OATP04181 439 aa13.7□□□□□ -0.22
CHPT1-203ENST00000546873 IFFO2Q5TF58 517 aa13.7□□□□□ -0.22
CHPT1-203ENST00000546873 GPIHBP1Q8IV16 184 aa13.7□□□□□ -0.22
CHPT1-203ENST00000546873 GNPATO15228 680 aa13.69□□□□□ -0.22
CHPT1-203ENST00000546873 ITGBL1O95965 494 aaPredicted RBP13.65□□□□□ -0.22
CHPT1-203ENST00000546873 KCNC4Q03721 635 aa13.65□□□□□ -0.22
CHPT1-203ENST00000546873 RCCD1A6NED2 376 aa13.64□□□□□ -0.23
CHPT1-203ENST00000546873 FAM161AQ3B820 660 aa13.64□□□□□ -0.23
CHPT1-203ENST00000546873 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms