RNA–Protein interactions for RNA: ENST00000546471.5

RRN3P1-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best)

Gene RRN3P1, Length 2,608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-202ENST00000546471 DCAF11Q8TEB1 546 aa12.62□□□□□ -0.39
RRN3P1-202ENST00000546471 PTPRGP23470 1445 aa12.62□□□□□ -0.39
RRN3P1-202ENST00000546471 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
RRN3P1-202ENST00000546471 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
RRN3P1-202ENST00000546471 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
RRN3P1-202ENST00000546471 ABCA8O94911 1581 aa12.61□□□□□ -0.39
RRN3P1-202ENST00000546471 DEKP35659 375 aaKnown RBP12.6□□□□□ -0.39
RRN3P1-202ENST00000546471 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
RRN3P1-202ENST00000546471 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
RRN3P1-202ENST00000546471 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
RRN3P1-202ENST00000546471 NUP160Q12769 1436 aa12.6□□□□□ -0.39
RRN3P1-202ENST00000546471 FBLN2P98095 1184 aa12.59□□□□□ -0.39
RRN3P1-202ENST00000546471 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
RRN3P1-202ENST00000546471 ATP10BO94823 1461 aa12.59□□□□□ -0.39
RRN3P1-202ENST00000546471 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
RRN3P1-202ENST00000546471 NBR1Q14596 966 aa12.58□□□□□ -0.4
RRN3P1-202ENST00000546471 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
RRN3P1-202ENST00000546471 RCAN3Q9UKA8 241 aa12.58□□□□□ -0.4
RRN3P1-202ENST00000546471 FAM135AQ9P2D6 1515 aa12.57□□□□□ -0.4
RRN3P1-202ENST00000546471 PARD3Q8TEW0 1356 aa12.57□□□□□ -0.4
RRN3P1-202ENST00000546471 HNRNPMP52272 730 aaKnown RBP eCLIP12.57□□□□□ -0.4
RRN3P1-202ENST00000546471 PRAG1Q86YV5 1406 aa12.56□□□□□ -0.4
RRN3P1-202ENST00000546471 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
RRN3P1-202ENST00000546471 TRPM1Q7Z4N2 1603 aa12.56□□□□□ -0.4
RRN3P1-202ENST00000546471 CCDC144AA2RUR9 1427 aa12.56□□□□□ -0.4
RRN3P1-202ENST00000546471 TCERG1O14776 1098 aaKnown RBP12.55□□□□□ -0.4
RRN3P1-202ENST00000546471 EXOC6Q8TAG9 804 aa12.55□□□□□ -0.4
RRN3P1-202ENST00000546471 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
RRN3P1-202ENST00000546471 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
RRN3P1-202ENST00000546471 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
RRN3P1-202ENST00000546471 WASHC2CQ9Y4E1 1318 aa12.53□□□□□ -0.4
RRN3P1-202ENST00000546471 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.4
RRN3P1-202ENST00000546471 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.4
RRN3P1-202ENST00000546471 GPRASP1Q5JY77 1395 aa12.52□□□□□ -0.41
RRN3P1-202ENST00000546471 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
RRN3P1-202ENST00000546471 LAMC1P11047 1609 aa12.52□□□□□ -0.41
RRN3P1-202ENST00000546471 INSRP06213 1382 aa12.52□□□□□ -0.41
RRN3P1-202ENST00000546471 ZMYM4Q5VZL5 1548 aa12.52□□□□□ -0.41
RRN3P1-202ENST00000546471 PREX2Q70Z35 1606 aa12.52□□□□□ -0.41
RRN3P1-202ENST00000546471 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
RRN3P1-202ENST00000546471 UNC13BO14795 1591 aa12.5□□□□□ -0.41
RRN3P1-202ENST00000546471 PRDM15P57071 1507 aaPredicted RBP12.5□□□□□ -0.41
RRN3P1-202ENST00000546471 MS4A1P11836 297 aa12.5□□□□□ -0.41
RRN3P1-202ENST00000546471 EIF2AK4Q9P2K8 1649 aaKnown RBP12.5□□□□□ -0.41
RRN3P1-202ENST00000546471 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
RRN3P1-202ENST00000546471 A2MP01023 1474 aa12.49□□□□□ -0.41
RRN3P1-202ENST00000546471 BLMP54132 1417 aaPredicted RBP12.49□□□□□ -0.41
RRN3P1-202ENST00000546471 CDC42BPBQ9Y5S2 1711 aa12.49□□□□□ -0.41
RRN3P1-202ENST00000546471 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
RRN3P1-202ENST00000546471 PLEKHH2Q8IVE3 1493 aa12.48□□□□□ -0.41
RRN3P1-202ENST00000546471 MAST1Q9Y2H9 1570 aa12.48□□□□□ -0.41
RRN3P1-202ENST00000546471 PDE4AP27815 886 aa12.48□□□□□ -0.41
RRN3P1-202ENST00000546471 NPM2Q86SE8 214 aaKnown RBP12.48□□□□□ -0.41
RRN3P1-202ENST00000546471 ERBINQ96RT1 1412 aa12.48□□□□□ -0.41
RRN3P1-202ENST00000546471 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
RRN3P1-202ENST00000546471 DISP3Q9P2K9 1392 aa12.47□□□□□ -0.41
RRN3P1-202ENST00000546471 PLA2R1Q13018 1463 aa12.47□□□□□ -0.41
RRN3P1-202ENST00000546471 SYCP2Q9BX26 1530 aa12.47□□□□□ -0.41
RRN3P1-202ENST00000546471 TMF1P82094 1093 aa12.46□□□□□ -0.41
RRN3P1-202ENST00000546471 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
RRN3P1-202ENST00000546471 TESK2Q96S53 571 aa12.46□□□□□ -0.41
RRN3P1-202ENST00000546471 BACH2Q9BYV9 841 aa12.46□□□□□ -0.42
RRN3P1-202ENST00000546471 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
RRN3P1-202ENST00000546471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
RRN3P1-202ENST00000546471 PANK3Q9H999 370 aa12.45□□□□□ -0.42
RRN3P1-202ENST00000546471 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
RRN3P1-202ENST00000546471 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
RRN3P1-202ENST00000546471 PLXNC1O60486 1568 aa12.44□□□□□ -0.42
RRN3P1-202ENST00000546471 ATP10AO60312 1499 aa12.42□□□□□ -0.42
RRN3P1-202ENST00000546471 PLIN1O60240 522 aa12.42□□□□□ -0.42
RRN3P1-202ENST00000546471 CRBNQ96SW2 442 aa12.41□□□□□ -0.42
RRN3P1-202ENST00000546471 TTC37Q6PGP7 1564 aa12.41□□□□□ -0.42
RRN3P1-202ENST00000546471 DUOX2Q9NRD8 1548 aa12.41□□□□□ -0.42
RRN3P1-202ENST00000546471 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
RRN3P1-202ENST00000546471 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
RRN3P1-202ENST00000546471 MAGI2Q86UL8 1455 aa12.4□□□□□ -0.42
RRN3P1-202ENST00000546471 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.39□□□□□ -0.43
RRN3P1-202ENST00000546471 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
RRN3P1-202ENST00000546471 PPM1GO15355 546 aaPredicted RBP12.38□□□□□ -0.43
RRN3P1-202ENST00000546471 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
RRN3P1-202ENST00000546471 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
RRN3P1-202ENST00000546471 NEFMP07197 916 aa12.38□□□□□ -0.43
RRN3P1-202ENST00000546471 ADAMTS8Q9UP79 889 aa12.38□□□□□ -0.43
RRN3P1-202ENST00000546471 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
RRN3P1-202ENST00000546471 CDCA8Q53HL2 280 aa12.36□□□□□ -0.43
RRN3P1-202ENST00000546471 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
RRN3P1-202ENST00000546471 PPP2R1AP30153 589 aa12.35□□□□□ -0.43
RRN3P1-202ENST00000546471 CENPQQ7L2Z9 268 aaPredicted RBP12.35□□□□□ -0.43
RRN3P1-202ENST00000546471 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.35□□□□□ -0.43
RRN3P1-202ENST00000546471 MADDQ8WXG6 1647 aa12.34□□□□□ -0.43
RRN3P1-202ENST00000546471 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
RRN3P1-202ENST00000546471 SYNMO15061 1565 aa12.34□□□□□ -0.43
RRN3P1-202ENST00000546471 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
RRN3P1-202ENST00000546471 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
RRN3P1-202ENST00000546471 PLEKHH1Q9ULM0 1364 aa12.34□□□□□ -0.43
RRN3P1-202ENST00000546471 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
RRN3P1-202ENST00000546471 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
RRN3P1-202ENST00000546471 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.44
RRN3P1-202ENST00000546471 ABCC2Q92887 1545 aa12.32□□□□□ -0.44
RRN3P1-202ENST00000546471 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms