RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 GLI2P10070 1586 aa21.6■■□□□ 1.05
CALCOCO1-203ENST00000546443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.057e-7■■■■□ 19.8
CALCOCO1-203ENST00000546443 VWDEQ8N2E2 1590 aa21.6■■□□□ 1.05
CALCOCO1-203ENST00000546443 HSPA5P11021 654 aaKnown RBP21.6■■□□□ 1.05
CALCOCO1-203ENST00000546443 NEO1Q92859 1461 aa21.59■■□□□ 1.05
CALCOCO1-203ENST00000546443 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
CALCOCO1-203ENST00000546443 E9PCH4 1651 aa21.58■■□□□ 1.05
CALCOCO1-203ENST00000546443 DHX29Q7Z478 1369 aaKnown RBP21.58■■□□□ 1.04
CALCOCO1-203ENST00000546443 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
CALCOCO1-203ENST00000546443 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
CALCOCO1-203ENST00000546443 MROH1Q8NDA8 1641 aa21.56■■□□□ 1.04
CALCOCO1-203ENST00000546443 DDX10Q13206 875 aaKnown RBP21.56■■□□□ 1.04
CALCOCO1-203ENST00000546443 TET3O43151 1660 aa21.56■■□□□ 1.04
CALCOCO1-203ENST00000546443 MLH3Q9UHC1 1453 aa21.55■■□□□ 1.04
CALCOCO1-203ENST00000546443 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
CALCOCO1-203ENST00000546443 SPATA31E1Q6ZUB1 1445 aa21.54■■□□□ 1.04
CALCOCO1-203ENST00000546443 PRDM15P57071 1507 aaPredicted RBP21.54■■□□□ 1.04
CALCOCO1-203ENST00000546443 HECW2Q9P2P5 1572 aa21.54■■□□□ 1.04
CALCOCO1-203ENST00000546443 POLR1AO95602 1720 aaPredicted RBP21.53■■□□□ 1.04
CALCOCO1-203ENST00000546443 RALGAPBQ86X10 1494 aa21.52■■□□□ 1.04
CALCOCO1-203ENST00000546443 RNF17Q9BXT8 1623 aaKnown RBP21.5■■□□□ 1.03
CALCOCO1-203ENST00000546443 SPHKAPQ2M3C7 1700 aa21.5■■□□□ 1.03
CALCOCO1-203ENST00000546443 BCORL1Q5H9F3 1711 aa21.5■■□□□ 1.03
CALCOCO1-203ENST00000546443 A2MP01023 1474 aa21.49■■□□□ 1.03
CALCOCO1-203ENST00000546443 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
CALCOCO1-203ENST00000546443 DIP2BQ9P265 1576 aa21.49■■□□□ 1.03
CALCOCO1-203ENST00000546443 ABCA6Q8N139 1617 aa21.48■■□□□ 1.03
CALCOCO1-203ENST00000546443 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
CALCOCO1-203ENST00000546443 TRPM2O94759 1503 aa21.47■■□□□ 1.03
CALCOCO1-203ENST00000546443 MYT1LQ9UL68 1186 aa21.47■■□□□ 1.03
CALCOCO1-203ENST00000546443 PTPRTO14522 1441 aa21.47■■□□□ 1.03
CALCOCO1-203ENST00000546443 KANK1Q14678 1352 aa21.47■■□□□ 1.03
CALCOCO1-203ENST00000546443 KIF3BO15066 747 aa21.46■■□□□ 1.03
CALCOCO1-203ENST00000546443 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
CALCOCO1-203ENST00000546443 CEP152O94986 1710 aa21.45■■□□□ 1.02
CALCOCO1-203ENST00000546443 LMTK2Q8IWU2 1503 aa21.45■■□□□ 1.02
CALCOCO1-203ENST00000546443 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.02
CALCOCO1-203ENST00000546443 TRPM1Q7Z4N2 1603 aa21.44■■□□□ 1.02
CALCOCO1-203ENST00000546443 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
CALCOCO1-203ENST00000546443 PRAG1Q86YV5 1406 aa21.42■■□□□ 1.02
CALCOCO1-203ENST00000546443 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
CALCOCO1-203ENST00000546443 CCDC7Q96M83 1385 aa21.41■■□□□ 1.02
CALCOCO1-203ENST00000546443 CLTCL1P53675 1640 aa21.41■■□□□ 1.02
CALCOCO1-203ENST00000546443 DIP2CQ9Y2E4 1556 aa21.41■■□□□ 1.02
CALCOCO1-203ENST00000546443 EFCAB6Q5THR3 1501 aa21.4■■□□□ 1.02
CALCOCO1-203ENST00000546443 ZNF326Q5BKZ1 582 aaKnown RBP21.4■■□□□ 1.02
CALCOCO1-203ENST00000546443 USP47Q96K76 1375 aa21.4■■□□□ 1.02
CALCOCO1-203ENST00000546443 C11orf95C9JLR9 678 aaPredicted RBP21.39■■□□□ 1.02
CALCOCO1-203ENST00000546443 KDM2AQ9Y2K7 1162 aa21.39■■□□□ 1.02
CALCOCO1-203ENST00000546443 LAMC1P11047 1609 aa21.38■■□□□ 1.01
CALCOCO1-203ENST00000546443 YTHDC1Q96MU7 727 aaKnown RBP21.38■■□□□ 1.01
CALCOCO1-203ENST00000546443 NEURL4Q96JN8 1562 aa21.37■■□□□ 1.01
CALCOCO1-203ENST00000546443 RAPGEF3O95398 923 aa21.36■■□□□ 1.01
CALCOCO1-203ENST00000546443 CNTLNQ9NXG0 1405 aa21.35■■□□□ 1.01
CALCOCO1-203ENST00000546443 ZMYM4Q5VZL5 1548 aa21.35■■□□□ 1.01
CALCOCO1-203ENST00000546443 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
CALCOCO1-203ENST00000546443 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
CALCOCO1-203ENST00000546443 ANP32CO43423 234 aa21.33■■□□□ 1
CALCOCO1-203ENST00000546443 TSPOAP1O95153 1857 aa21.33■■□□□ 1
CALCOCO1-203ENST00000546443 KIF7Q2M1P5 1343 aa21.32■■□□□ 1
CALCOCO1-203ENST00000546443 GPRASP1Q5JY77 1395 aa21.32■■□□□ 1
CALCOCO1-203ENST00000546443 CCER2I3L3R5 266 aa21.31■■□□□ 1
CALCOCO1-203ENST00000546443 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
CALCOCO1-203ENST00000546443 KIF13AQ9H1H9 1805 aa21.31■■□□□ 1
CALCOCO1-203ENST00000546443 MADDQ8WXG6 1647 aa21.31■■□□□ 1
CALCOCO1-203ENST00000546443 ABCC3O15438 1527 aa21.29■■□□□ 1
CALCOCO1-203ENST00000546443 KIF1BO60333 1816 aa21.29■■□□□ 1
CALCOCO1-203ENST00000546443 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
CALCOCO1-203ENST00000546443 YEATS2Q9ULM3 1422 aa21.27■■□□□ 1
CALCOCO1-203ENST00000546443 CAMSAP1Q5T5Y3 1602 aa21.27■■□□□ 1
CALCOCO1-203ENST00000546443 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
CALCOCO1-203ENST00000546443 IFT172Q9UG01 1749 aa21.26■□□□□ 0.99
CALCOCO1-203ENST00000546443 UGGT1Q9NYU2 1555 aa21.25■□□□□ 0.99
CALCOCO1-203ENST00000546443 ZC3H13Q5T200 1668 aaKnown RBP21.25■□□□□ 0.99
CALCOCO1-203ENST00000546443 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
CALCOCO1-203ENST00000546443 MROH2AA6NES4 1674 aa21.24■□□□□ 0.99
CALCOCO1-203ENST00000546443 NPATQ14207 1427 aa21.24■□□□□ 0.99
CALCOCO1-203ENST00000546443 NBPF1Q3BBV0 1214 aa21.23■□□□□ 0.99
CALCOCO1-203ENST00000546443 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
CALCOCO1-203ENST00000546443 GGT6Q6P531 493 aa21.22■□□□□ 0.99
CALCOCO1-203ENST00000546443 REREQ9P2R6 1566 aa21.22■□□□□ 0.99
CALCOCO1-203ENST00000546443 KIAA1210Q9ULL0 1709 aa21.21■□□□□ 0.99
CALCOCO1-203ENST00000546443 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
CALCOCO1-203ENST00000546443 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
CALCOCO1-203ENST00000546443 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
CALCOCO1-203ENST00000546443 IQGAP1P46940 1657 aa21.19■□□□□ 0.98
CALCOCO1-203ENST00000546443 MYOM2P54296 1465 aa21.19■□□□□ 0.98
CALCOCO1-203ENST00000546443 CFAP65Q6ZU64 1925 aaKnown RBP21.17■□□□□ 0.98
CALCOCO1-203ENST00000546443 NOS1P29475 1434 aa21.17■□□□□ 0.98
CALCOCO1-203ENST00000546443 ARHGAP31Q2M1Z3 1444 aa21.17■□□□□ 0.98
CALCOCO1-203ENST00000546443 PIK3C2BO00750 1634 aa21.16■□□□□ 0.98
CALCOCO1-203ENST00000546443 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
CALCOCO1-203ENST00000546443 AGLP35573 1532 aa21.14■□□□□ 0.98
CALCOCO1-203ENST00000546443 SYNMO15061 1565 aa21.14■□□□□ 0.97
CALCOCO1-203ENST00000546443 PPLO60437 1756 aa21.13■□□□□ 0.97
CALCOCO1-203ENST00000546443 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
CALCOCO1-203ENST00000546443 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
CALCOCO1-203ENST00000546443 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
CALCOCO1-203ENST00000546443 TESK2Q96S53 571 aa21.09■□□□□ 0.97
CALCOCO1-203ENST00000546443 PREX1Q8TCU6 1659 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms