RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
SSH1-203ENST00000546433 U2SURPO15042 1029 aaKnown RBP13.31□□□□□ -0.28
SSH1-203ENST00000546433 TOM1O60784 492 aa13.31□□□□□ -0.28
SSH1-203ENST00000546433 FANCAO15360 1455 aa13.3□□□□□ -0.28
SSH1-203ENST00000546433 KTN1Q86UP2 1357 aaKnown RBP13.3□□□□□ -0.28
SSH1-203ENST00000546433 KIF21BO75037 1637 aa13.3□□□□□ -0.28
SSH1-203ENST00000546433 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
SSH1-203ENST00000546433 RGS3P49796 1198 aa13.29□□□□□ -0.28
SSH1-203ENST00000546433 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
SSH1-203ENST00000546433 TROQ12816 1431 aaPredicted RBP13.29□□□□□ -0.28
SSH1-203ENST00000546433 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
SSH1-203ENST00000546433 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
SSH1-203ENST00000546433 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.28
SSH1-203ENST00000546433 FYCO1Q9BQS8 1478 aa13.27□□□□□ -0.29
SSH1-203ENST00000546433 OS9Q13438 667 aaPredicted RBP13.27□□□□□ -0.29
SSH1-203ENST00000546433 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
SSH1-203ENST00000546433 GOLGA6L6A8MZA4 724 aa13.26□□□□□ -0.29
SSH1-203ENST00000546433 TNNT2P45379 298 aaPredicted RBP13.26□□□□□ -0.29
SSH1-203ENST00000546433 KIF14Q15058 1648 aa13.26□□□□□ -0.29
SSH1-203ENST00000546433 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
SSH1-203ENST00000546433 RALBP1Q15311 655 aa13.26□□□□□ -0.29
SSH1-203ENST00000546433 AFAP1Q8N556 730 aa13.26□□□□□ -0.29
SSH1-203ENST00000546433 HSCBQ8IWL3 235 aa13.25□□□□□ -0.29
SSH1-203ENST00000546433 WDR7Q9Y4E6 1490 aa13.25□□□□□ -0.29
SSH1-203ENST00000546433 CCDC144AA2RUR9 1427 aa13.24□□□□□ -0.29
SSH1-203ENST00000546433 MCCP23508 829 aa13.24□□□□□ -0.29
SSH1-203ENST00000546433 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
SSH1-203ENST00000546433 SOX12O15370 315 aa13.24□□□□□ -0.29
SSH1-203ENST00000546433 KIF15Q9NS87 1388 aa13.24□□□□□ -0.29
SSH1-203ENST00000546433 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
SSH1-203ENST00000546433 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
SSH1-203ENST00000546433 EHBP1L1Q8N3D4 1523 aa13.23□□□□□ -0.29
SSH1-203ENST00000546433 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
SSH1-203ENST00000546433 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
SSH1-203ENST00000546433 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
SSH1-203ENST00000546433 RAB3GAP2Q9H2M9 1393 aa13.22□□□□□ -0.29
SSH1-203ENST00000546433 NRDCO43847 1150 aa13.22□□□□□ -0.29
SSH1-203ENST00000546433 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
SSH1-203ENST00000546433 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
SSH1-203ENST00000546433 SLC52A1Q9NWF4 448 aa13.22□□□□□ -0.29
SSH1-203ENST00000546433 FGD1P98174 961 aa13.21□□□□□ -0.29
SSH1-203ENST00000546433 KCNJ4P48050 445 aa13.21□□□□□ -0.29
SSH1-203ENST00000546433 ROCK2O75116 1388 aaKnown RBP13.21□□□□□ -0.29
SSH1-203ENST00000546433 STAC3Q96MF2 364 aa13.21□□□□□ -0.29
SSH1-203ENST00000546433 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
SSH1-203ENST00000546433 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
SSH1-203ENST00000546433 MSH5O43196 834 aa13.2□□□□□ -0.3
SSH1-203ENST00000546433 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
SSH1-203ENST00000546433 CHMP4AQ9BY43 222 aa13.19□□□□□ -0.3
SSH1-203ENST00000546433 PTMSP20962 102 aa13.19□□□□□ -0.3
SSH1-203ENST00000546433 DHX57Q6P158 1386 aaKnown RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 L1TD1Q5T7N2 865 aaKnown RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
SSH1-203ENST00000546433 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
SSH1-203ENST00000546433 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
SSH1-203ENST00000546433 AMPHP49418 695 aa13.17□□□□□ -0.3
SSH1-203ENST00000546433 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
SSH1-203ENST00000546433 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
SSH1-203ENST00000546433 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
SSH1-203ENST00000546433 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
SSH1-203ENST00000546433 RWDD1Q9H446 243 aaPredicted RBP13.15□□□□□ -0.3
SSH1-203ENST00000546433 RCAN3Q9UKA8 241 aa13.14□□□□□ -0.31
SSH1-203ENST00000546433 UHRF1BP1Q6BDS2 1440 aa13.14□□□□□ -0.31
SSH1-203ENST00000546433 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
SSH1-203ENST00000546433 TCERG1O14776 1098 aaKnown RBP13.14□□□□□ -0.31
SSH1-203ENST00000546433 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
SSH1-203ENST00000546433 FAM135AQ9P2D6 1515 aa13.13□□□□□ -0.31
SSH1-203ENST00000546433 NAP1L5Q96NT1 182 aaPredicted RBP13.13□□□□□ -0.31
SSH1-203ENST00000546433 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
SSH1-203ENST00000546433 PBRM1Q86U86 1689 aa13.13□□□□□ -0.31
SSH1-203ENST00000546433 NUTM2FA1L443 756 aa13.13□□□□□ -0.31
SSH1-203ENST00000546433 LRPPRCP42704 1394 aaKnown RBP13.12□□□□□ -0.31
SSH1-203ENST00000546433 NUP160Q12769 1436 aa13.12□□□□□ -0.31
SSH1-203ENST00000546433 ESCO1Q5FWF5 840 aa13.12□□□□□ -0.31
SSH1-203ENST00000546433 PLCB2Q00722 1185 aa13.12□□□□□ -0.31
SSH1-203ENST00000546433 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
SSH1-203ENST00000546433 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
SSH1-203ENST00000546433 PMFBP1Q8TBY8 1022 aa13.11□□□□□ -0.31
SSH1-203ENST00000546433 PRXQ9BXM0 1461 aa13.11□□□□□ -0.31
SSH1-203ENST00000546433 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
SSH1-203ENST00000546433 CHAF1AQ13111 956 aaPredicted RBP13.11□□□□□ -0.31
SSH1-203ENST00000546433 RRBP1Q9P2E9 1410 aaKnown RBP13.1□□□□□ -0.31
SSH1-203ENST00000546433 C9orf84Q5VXU9 1444 aa13.1□□□□□ -0.31
SSH1-203ENST00000546433 NAP1L2Q9ULW6 460 aaPredicted RBP13.1□□□□□ -0.31
SSH1-203ENST00000546433 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
SSH1-203ENST00000546433 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
SSH1-203ENST00000546433 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
SSH1-203ENST00000546433 TNRQ92752 1358 aa13.1□□□□□ -0.31
SSH1-203ENST00000546433 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 MSH6P52701 1360 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 G3V3G9 751 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 CCDC141Q6ZP82 1450 aa13.09□□□□□ -0.31
SSH1-203ENST00000546433 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms