RNA–Protein interactions for RNA: ENST00000546125.1

KNTC1-215, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 624 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-215ENST00000546125 BCL2L12Q9HB09 334 aa6.23□□□□□ -1.41
KNTC1-215ENST00000546125 DMRTA1Q5VZB9 504 aa6.22□□□□□ -1.41
KNTC1-215ENST00000546125 PTPREP23469 700 aa6.21□□□□□ -1.42
KNTC1-215ENST00000546125 NBR1Q14596 966 aa6.21□□□□□ -1.42
KNTC1-215ENST00000546125 FBXW7Q969H0 707 aa6.21□□□□□ -1.42
KNTC1-215ENST00000546125 MLLT3P42568 568 aaPredicted RBP6.19□□□□□ -1.42
KNTC1-215ENST00000546125 SEMA3EO15041 775 aa6.18□□□□□ -1.42
KNTC1-215ENST00000546125 MAP3K7O43318 606 aa6.18□□□□□ -1.42
KNTC1-215ENST00000546125 C6orf132Q5T0Z8 1188 aa6.18□□□□□ -1.42
KNTC1-215ENST00000546125 COL9A1P20849 921 aa6.17□□□□□ -1.42
KNTC1-215ENST00000546125 OSBPP22059 807 aa6.17□□□□□ -1.42
KNTC1-215ENST00000546125 PRIM1P49642 420 aaKnown RBP6.17□□□□□ -1.42
KNTC1-215ENST00000546125 ADGRD1Q6QNK2 874 aa6.17□□□□□ -1.42
KNTC1-215ENST00000546125 EN1Q05925 392 aaPredicted RBP6.16□□□□□ -1.42
KNTC1-215ENST00000546125 TSR1Q2NL82 804 aaKnown RBP6.16□□□□□ -1.42
KNTC1-215ENST00000546125 STAC3Q96MF2 364 aa6.16□□□□□ -1.42
KNTC1-215ENST00000546125 TK2O00142 265 aa6.15□□□□□ -1.42
KNTC1-215ENST00000546125 ZBED2Q9BTP6 218 aa6.15□□□□□ -1.42
KNTC1-215ENST00000546125 VPS9D1Q9Y2B5 631 aa6.15□□□□□ -1.42
KNTC1-215ENST00000546125 PPP1R3GB7ZBB8 358 aa6.14□□□□□ -1.43
KNTC1-215ENST00000546125 PROX2Q3B8N5 592 aa6.14□□□□□ -1.43
KNTC1-215ENST00000546125 SLC4A5Q9BY07 1137 aa6.13□□□□□ -1.43
KNTC1-215ENST00000546125 TESPA1A2RU30 521 aaPredicted RBP6.12□□□□□ -1.43
KNTC1-215ENST00000546125 HRO43593 1189 aa6.12□□□□□ -1.43
KNTC1-215ENST00000546125 CDHR5Q9HBB8 845 aa6.12□□□□□ -1.43
KNTC1-215ENST00000546125 NUTM2FA1L443 756 aa6.11□□□□□ -1.43
KNTC1-215ENST00000546125 SMYD5Q6GMV2 418 aa6.11□□□□□ -1.43
KNTC1-215ENST00000546125 KIAA1468Q9P260 1216 aa6.11□□□□□ -1.43
KNTC1-215ENST00000546125 GOLGA8CPA6NN73 597 aa6.09□□□□□ -1.43
KNTC1-215ENST00000546125 TRIM6-TRIM34B2RNG4 842 aa6.09□□□□□ -1.43
KNTC1-215ENST00000546125 RBM26Q5T8P6 1007 aaKnown RBP6.09□□□□□ -1.43
KNTC1-215ENST00000546125 MRPL50Q8N5N7 158 aaKnown RBP6.09□□□□□ -1.43
KNTC1-215ENST00000546125 RABGEF1Q9UJ41 708 aa6.09□□□□□ -1.43
KNTC1-215ENST00000546125 BHMG1C9JSJ3 638 aaPredicted RBP6.08□□□□□ -1.44
KNTC1-215ENST00000546125 ONECUT3O60422 494 aaPredicted RBP6.08□□□□□ -1.44
KNTC1-215ENST00000546125 SLC24A1O60721 1099 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 PRSS12P56730 875 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 PACS2Q86VP3 889 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 CERKQ8TCT0 537 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 CDCA7LQ96GN5 454 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 NPDC1Q9NQX5 325 aaPredicted RBP6.08□□□□□ -1.44
KNTC1-215ENST00000546125 PLA2G2EQ9NZK7 142 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 TSKSQ9UJT2 592 aa6.08□□□□□ -1.44
KNTC1-215ENST00000546125 KCTD12Q96CX2 325 aaKnown RBP6.07□□□□□ -1.44
KNTC1-215ENST00000546125 NBPF3Q9H094 633 aa6.07□□□□□ -1.44
KNTC1-215ENST00000546125 FAM198AQ9UFP1 575 aa6.06□□□□□ -1.44
KNTC1-215ENST00000546125 SEPT9Q9UHD8 586 aaPredicted RBP6.06□□□□□ -1.44
KNTC1-215ENST00000546125 SMAPO00193 183 aa6.05□□□□□ -1.44
KNTC1-215ENST00000546125 TULP1O00294 542 aaPredicted RBP6.05□□□□□ -1.44
KNTC1-215ENST00000546125 PADI6Q6TGC4 694 aa6.05□□□□□ -1.44
KNTC1-215ENST00000546125 FCHSD2O94868 740 aa6.04□□□□□ -1.44
KNTC1-215ENST00000546125 PTGDRQ13258 359 aa6.04□□□□□ -1.44
KNTC1-215ENST00000546125 WNT2BQ93097 391 aa6.04□□□□□ -1.44
KNTC1-215ENST00000546125 PNMA3Q9UL41 463 aa6.04□□□□□ -1.44
KNTC1-215ENST00000546125 C3orf80F5H4A9 247 aa6.03□□□□□ -1.44
KNTC1-215ENST00000546125 LAPTM4BQ86VI4 370 aa6.03□□□□□ -1.44
KNTC1-215ENST00000546125 TATDN2Q93075 761 aa6.03□□□□□ -1.44
KNTC1-215ENST00000546125 HCSTQ9UBK5 93 aa6.03□□□□□ -1.44
KNTC1-215ENST00000546125 NBPF26B4DH59 902 aa6.02□□□□□ -1.45
KNTC1-215ENST00000546125 PTPN5P54829 565 aa6.02□□□□□ -1.45
KNTC1-215ENST00000546125 NUDT18Q6ZVK8 323 aa6.02□□□□□ -1.45
KNTC1-215ENST00000546125 ZFRQ96KR1 1074 aaKnown RBP6.02□□□□□ -1.45
KNTC1-215ENST00000546125 FAM98CQ17RN3 349 aaKnown RBP6.01□□□□□ -1.45
KNTC1-215ENST00000546125 GPIHBP1Q8IV16 184 aa6.01□□□□□ -1.45
KNTC1-215ENST00000546125 TTC13Q8NBP0 860 aa6.01□□□□□ -1.45
KNTC1-215ENST00000546125 ANKK1Q8NFD2 765 aa6.01□□□□□ -1.45
KNTC1-215ENST00000546125 RBM27Q9P2N5 1060 aaKnown RBP6.01□□□□□ -1.45
KNTC1-215ENST00000546125 FAM161AQ3B820 660 aa6□□□□□ -1.45
KNTC1-215ENST00000546125 FECHP22830 423 aa5.99□□□□□ -1.45
KNTC1-215ENST00000546125 BCAMP50895 628 aa5.99□□□□□ -1.45
KNTC1-215ENST00000546125 HIC1Q14526 733 aa5.99□□□□□ -1.45
KNTC1-215ENST00000546125 THSD4Q6ZMP0 1018 aa5.99□□□□□ -1.45
KNTC1-215ENST00000546125 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.99□□□□□ -1.45
KNTC1-215ENST00000546125 GNPATO15228 680 aa5.98□□□□□ -1.45
KNTC1-215ENST00000546125 HDGFP51858 240 aaKnown RBP5.98□□□□□ -1.45
KNTC1-215ENST00000546125 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.98□□□□□ -1.45
KNTC1-215ENST00000546125 SOWAHBA6NEL2 793 aa5.97□□□□□ -1.45
KNTC1-215ENST00000546125 SAMD7Q7Z3H4 446 aa5.97□□□□□ -1.45
KNTC1-215ENST00000546125 RBM46Q8TBY0 533 aaKnown RBP5.97□□□□□ -1.45
KNTC1-215ENST00000546125 LRCH3Q96II8 777 aa5.97□□□□□ -1.45
KNTC1-215ENST00000546125 EYA1Q99502 592 aa5.97□□□□□ -1.45
KNTC1-215ENST00000546125 ADGRG1Q9Y653 693 aa5.97□□□□□ -1.45
KNTC1-215ENST00000546125 GPR37O15354 613 aa5.96□□□□□ -1.46
KNTC1-215ENST00000546125 LMOD2Q6P5Q4 547 aa5.96□□□□□ -1.46
KNTC1-215ENST00000546125 RNF40O75150 1001 aa5.95□□□□□ -1.46
KNTC1-215ENST00000546125 WBP1LQ9NX94 342 aa5.95□□□□□ -1.46
KNTC1-215ENST00000546125 HPS5Q9UPZ3 1129 aa5.95□□□□□ -1.46
KNTC1-215ENST00000546125 RCCD1A6NED2 376 aa5.94□□□□□ -1.46
KNTC1-215ENST00000546125 OATP04181 439 aa5.94□□□□□ -1.46
KNTC1-215ENST00000546125 PPP4CP60510 307 aa5.94□□□□□ -1.46
KNTC1-215ENST00000546125 SWT1Q5T5J6 900 aaKnown RBP5.94□□□□□ -1.46
KNTC1-215ENST00000546125 DNAJB2P25686 324 aa5.93□□□□□ -1.46
KNTC1-215ENST00000546125 TSR3Q9UJK0 312 aaKnown RBP5.93□□□□□ -1.46
KNTC1-215ENST00000546125 KRI1Q8N9T8 703 aaKnown RBP5.92□□□□□ -1.46
KNTC1-215ENST00000546125 PXYLP1Q8TE99 480 aa5.92□□□□□ -1.46
KNTC1-215ENST00000546125 BCANQ96GW7 911 aa5.92□□□□□ -1.46
KNTC1-215ENST00000546125 RGS20O76081 388 aa5.91□□□□□ -1.46
KNTC1-215ENST00000546125 SLC4A3P48751 1232 aa5.91□□□□□ -1.46
KNTC1-215ENST00000546125 METTL3Q86U44 580 aaKnown RBP5.91□□□□□ -1.46
KNTC1-215ENST00000546125 NLRP7Q8WX94 980 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms