RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.37
TRAF1-203ENST00000546084 CCDC144AA2RUR9 1427 aa12.76□□□□□ -0.37
TRAF1-203ENST00000546084 RRP1P56182 461 aaKnown RBP12.76□□□□□ -0.37
TRAF1-203ENST00000546084 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
TRAF1-203ENST00000546084 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
TRAF1-203ENST00000546084 PDE4AP27815 886 aa12.75□□□□□ -0.37
TRAF1-203ENST00000546084 SPAG9O60271 1321 aaKnown RBP12.75□□□□□ -0.37
TRAF1-203ENST00000546084 DAPK1P53355 1430 aa12.75□□□□□ -0.37
TRAF1-203ENST00000546084 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
TRAF1-203ENST00000546084 CFAP70Q5T0N1 1121 aa12.75□□□□□ -0.37
TRAF1-203ENST00000546084 MORC1Q86VD1 984 aa12.75□□□□□ -0.37
TRAF1-203ENST00000546084 ABCC5O15440 1437 aa12.75□□□□□ -0.37
TRAF1-203ENST00000546084 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
TRAF1-203ENST00000546084 RALBP1Q15311 655 aa12.74□□□□□ -0.37
TRAF1-203ENST00000546084 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
TRAF1-203ENST00000546084 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
TRAF1-203ENST00000546084 TCERG1O14776 1098 aaKnown RBP12.74□□□□□ -0.37
TRAF1-203ENST00000546084 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
TRAF1-203ENST00000546084 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
TRAF1-203ENST00000546084 ZBTB7CA1YPR0 619 aa12.73□□□□□ -0.37
TRAF1-203ENST00000546084 U2AF1L5P0DN76 240 aaPredicted RBP12.73□□□□□ -0.37
TRAF1-203ENST00000546084 U2AF1Q01081 240 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRAF1-203ENST00000546084 SLKQ9H2G2 1235 aaPredicted RBP12.73□□□□□ -0.37
TRAF1-203ENST00000546084 RPRD2Q5VT52 1461 aaKnown RBP12.72□□□□□ -0.37
TRAF1-203ENST00000546084 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
TRAF1-203ENST00000546084 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
TRAF1-203ENST00000546084 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
TRAF1-203ENST00000546084 TPRNQ4KMQ1 711 aa12.72□□□□□ -0.37
TRAF1-203ENST00000546084 UGGT2Q9NYU1 1516 aa12.71□□□□□ -0.37
TRAF1-203ENST00000546084 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
TRAF1-203ENST00000546084 POGKQ9P215 609 aa12.71□□□□□ -0.37
TRAF1-203ENST00000546084 KDM6BO15054 1643 aa12.71□□□□□ -0.38
TRAF1-203ENST00000546084 COG6Q9Y2V7 657 aa12.71□□□□□ -0.38
TRAF1-203ENST00000546084 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
TRAF1-203ENST00000546084 CUL7Q14999 1698 aa12.7□□□□□ -0.38
TRAF1-203ENST00000546084 DENND4BO75064 1496 aaPredicted RBP12.7□□□□□ -0.38
TRAF1-203ENST00000546084 LAMC3Q9Y6N6 1575 aa12.69□□□□□ -0.38
TRAF1-203ENST00000546084 APBB1O00213 710 aa12.69□□□□□ -0.38
TRAF1-203ENST00000546084 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
TRAF1-203ENST00000546084 A0A0U1RQG5 324 aaPredicted RBP12.68□□□□□ -0.38
TRAF1-203ENST00000546084 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
TRAF1-203ENST00000546084 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
TRAF1-203ENST00000546084 FTSJ3Q8IY81 847 aaKnown RBP12.68□□□□□ -0.38
TRAF1-203ENST00000546084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAF1-203ENST00000546084 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
TRAF1-203ENST00000546084 CTTNBP2Q8WZ74 1663 aa12.67□□□□□ -0.38
TRAF1-203ENST00000546084 BCAR3O75815 825 aa12.67□□□□□ -0.38
TRAF1-203ENST00000546084 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
TRAF1-203ENST00000546084 PANK1Q8TE04 598 aa12.66□□□□□ -0.38
TRAF1-203ENST00000546084 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
TRAF1-203ENST00000546084 C9orf84Q5VXU9 1444 aa12.66□□□□□ -0.38
TRAF1-203ENST00000546084 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
TRAF1-203ENST00000546084 CDCA8Q53HL2 280 aa12.65□□□□□ -0.38
TRAF1-203ENST00000546084 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
TRAF1-203ENST00000546084 SLC12A5Q9H2X9 1139 aa12.65□□□□□ -0.38
TRAF1-203ENST00000546084 SPATA31E1Q6ZUB1 1445 aa12.65□□□□□ -0.38
TRAF1-203ENST00000546084 TROQ12816 1431 aaPredicted RBP12.65□□□□□ -0.38
TRAF1-203ENST00000546084 DDRGK1Q96HY6 314 aa12.64□□□□□ -0.39
TRAF1-203ENST00000546084 BACH2Q9BYV9 841 aa12.64□□□□□ -0.39
TRAF1-203ENST00000546084 ARID4BQ4LE39 1312 aaPredicted RBP12.64□□□□□ -0.39
TRAF1-203ENST00000546084 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
TRAF1-203ENST00000546084 WASHC2CQ9Y4E1 1318 aa12.63□□□□□ -0.39
TRAF1-203ENST00000546084 MINK1Q8N4C8 1332 aaPredicted RBP12.63□□□□□ -0.39
TRAF1-203ENST00000546084 TEX14Q8IWB6 1497 aa12.63□□□□□ -0.39
TRAF1-203ENST00000546084 GZF1Q9H116 711 aaPredicted RBP12.63□□□□□ -0.39
TRAF1-203ENST00000546084 IQGAP2Q13576 1575 aa12.63□□□□□ -0.39
TRAF1-203ENST00000546084 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
TRAF1-203ENST00000546084 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
TRAF1-203ENST00000546084 UPF2Q9HAU5 1272 aaKnown RBP12.62□□□□□ -0.39
TRAF1-203ENST00000546084 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
TRAF1-203ENST00000546084 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
TRAF1-203ENST00000546084 PDE3BQ13370 1112 aa12.62□□□□□ -0.39
TRAF1-203ENST00000546084 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
TRAF1-203ENST00000546084 CAMSAP2Q08AD1 1489 aa12.6□□□□□ -0.39
TRAF1-203ENST00000546084 FBLN1P23142 703 aa12.6□□□□□ -0.39
TRAF1-203ENST00000546084 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
TRAF1-203ENST00000546084 MS4A1P11836 297 aa12.6□□□□□ -0.39
TRAF1-203ENST00000546084 SAMD9Q5K651 1589 aa12.59□□□□□ -0.39
TRAF1-203ENST00000546084 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
TRAF1-203ENST00000546084 RAPGEF3O95398 923 aa12.59□□□□□ -0.39
TRAF1-203ENST00000546084 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.4
TRAF1-203ENST00000546084 NUP153P49790 1475 aaKnown RBP12.57□□□□□ -0.4
TRAF1-203ENST00000546084 KANK1Q14678 1352 aa12.57□□□□□ -0.4
TRAF1-203ENST00000546084 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
TRAF1-203ENST00000546084 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
TRAF1-203ENST00000546084 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
TRAF1-203ENST00000546084 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
TRAF1-203ENST00000546084 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
TRAF1-203ENST00000546084 MTHFSP49914 203 aa12.56□□□□□ -0.4
TRAF1-203ENST00000546084 GCC2Q8IWJ2 1684 aa12.56□□□□□ -0.4
TRAF1-203ENST00000546084 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
TRAF1-203ENST00000546084 LRRIQ1Q96JM4 1722 aa12.55□□□□□ -0.4
TRAF1-203ENST00000546084 CENPJQ9HC77 1338 aaPredicted RBP12.55□□□□□ -0.4
TRAF1-203ENST00000546084 NFKBIBQ15653 356 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms