RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 COG3Q96JB2 828 aa11.57□□□□□ -0.56
MTHFD1-202ENST00000545908 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
MTHFD1-202ENST00000545908 NAP1L2Q9ULW6 460 aaPredicted RBP11.56□□□□□ -0.56
MTHFD1-202ENST00000545908 FGD1P98174 961 aa11.55□□□□□ -0.56
MTHFD1-202ENST00000545908 C1orf141Q5JVX7 400 aa11.54□□□□□ -0.56
MTHFD1-202ENST00000545908 PLEKHH2Q8IVE3 1493 aa11.54□□□□□ -0.56
MTHFD1-202ENST00000545908 G3V3G9 751 aa11.54□□□□□ -0.56
MTHFD1-202ENST00000545908 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
MTHFD1-202ENST00000545908 CHMP3Q9Y3E7 222 aa11.54□□□□□ -0.56
MTHFD1-202ENST00000545908 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
MTHFD1-202ENST00000545908 TAF7LQ5H9L4 462 aa11.53□□□□□ -0.56
MTHFD1-202ENST00000545908 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
MTHFD1-202ENST00000545908 ISY1Q9ULR0 285 aaKnown RBP11.53□□□□□ -0.56
MTHFD1-202ENST00000545908 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
MTHFD1-202ENST00000545908 CCDC146Q8IYE0 955 aa11.52□□□□□ -0.56
MTHFD1-202ENST00000545908 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.56
MTHFD1-202ENST00000545908 LMOD3Q0VAK6 560 aa11.52□□□□□ -0.56
MTHFD1-202ENST00000545908 RGS3P49796 1198 aa11.52□□□□□ -0.57
MTHFD1-202ENST00000545908 POGZQ7Z3K3 1410 aa11.51□□□□□ -0.57
MTHFD1-202ENST00000545908 DHX57Q6P158 1386 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-202ENST00000545908 MSH5O43196 834 aa11.51□□□□□ -0.57
MTHFD1-202ENST00000545908 KIF14Q15058 1648 aa11.51□□□□□ -0.57
MTHFD1-202ENST00000545908 CGNL1Q0VF96 1302 aa11.51□□□□□ -0.57
MTHFD1-202ENST00000545908 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
MTHFD1-202ENST00000545908 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-202ENST00000545908 ZRSR1Q15695 479 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-202ENST00000545908 NBR1Q14596 966 aa11.5□□□□□ -0.57
MTHFD1-202ENST00000545908 ABCA10Q8WWZ4 1543 aa11.5□□□□□ -0.57
MTHFD1-202ENST00000545908 AFAP1Q8N556 730 aa11.5□□□□□ -0.57
MTHFD1-202ENST00000545908 PHF23Q9BUL5 403 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-202ENST00000545908 ITPRIPQ8IWB1 547 aa11.49□□□□□ -0.57
MTHFD1-202ENST00000545908 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
MTHFD1-202ENST00000545908 ANKRD50Q9ULJ7 1429 aa11.49□□□□□ -0.57
MTHFD1-202ENST00000545908 APBB1O00213 710 aa11.49□□□□□ -0.57
MTHFD1-202ENST00000545908 PANK3Q9H999 370 aa11.49□□□□□ -0.57
MTHFD1-202ENST00000545908 ST20-MTHFSA0A0A6YYL1 179 aa11.48□□□□□ -0.57
MTHFD1-202ENST00000545908 RRBP1Q9P2E9 1410 aaKnown RBP11.48□□□□□ -0.57
MTHFD1-202ENST00000545908 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
MTHFD1-202ENST00000545908 KIAA0586Q9BVV6 1533 aa11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 MCCP23508 829 aa11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 C9orf84Q5VXU9 1444 aa11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 GORABQ5T7V8 394 aa11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 USP47Q96K76 1375 aa11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 GTF2E1P29083 439 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 GRIN2AQ12879 1464 aa11.47□□□□□ -0.57
MTHFD1-202ENST00000545908 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.57
MTHFD1-202ENST00000545908 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-202ENST00000545908 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.57
MTHFD1-202ENST00000545908 CDK13Q14004 1512 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-202ENST00000545908 PHLDB1Q86UU1 1377 aa11.46□□□□□ -0.57
MTHFD1-202ENST00000545908 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
MTHFD1-202ENST00000545908 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.58
MTHFD1-202ENST00000545908 SMC4Q9NTJ3 1288 aa11.46□□□□□ -0.58
MTHFD1-202ENST00000545908 SLC4A10Q6U841 1118 aa11.45□□□□□ -0.58
MTHFD1-202ENST00000545908 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-202ENST00000545908 TROQ12816 1431 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-202ENST00000545908 MIA2Q96PC5 1412 aa11.45□□□□□ -0.58
MTHFD1-202ENST00000545908 GPATCH3Q96I76 525 aa11.45□□□□□ -0.58
MTHFD1-202ENST00000545908 KIF21AQ7Z4S6 1674 aa11.44□□□□□ -0.58
MTHFD1-202ENST00000545908 TTC5Q8N0Z6 440 aa11.44□□□□□ -0.58
MTHFD1-202ENST00000545908 PROSER2Q86WR7 435 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-202ENST00000545908 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
MTHFD1-202ENST00000545908 PCF11O94913 1555 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-202ENST00000545908 THEMISQ8N1K5 641 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-202ENST00000545908 RAPGEF3O95398 923 aa11.43□□□□□ -0.58
MTHFD1-202ENST00000545908 TIAM1Q13009 1591 aa11.43□□□□□ -0.58
MTHFD1-202ENST00000545908 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 CD109Q6YHK3 1445 aa11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 MYBBP1AQ9BQG0 1328 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 HDAC5Q9UQL6 1122 aa11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
MTHFD1-202ENST00000545908 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 KIAA1211Q6ZU35 1233 aa11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 RRP7AQ9Y3A4 280 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 GPRASP1Q5JY77 1395 aa11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 RCAN3Q9UKA8 241 aa11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 TEFQ10587 303 aa11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 NLRP13Q86W25 1043 aa11.41□□□□□ -0.58
MTHFD1-202ENST00000545908 B4GALNT3Q6L9W6 998 aa11.4□□□□□ -0.58
MTHFD1-202ENST00000545908 PRXQ9BXM0 1461 aa11.4□□□□□ -0.58
MTHFD1-202ENST00000545908 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
MTHFD1-202ENST00000545908 ARHGEF11O15085 1522 aa11.4□□□□□ -0.58
MTHFD1-202ENST00000545908 TMEM132EQ6IEE7 984 aa11.4□□□□□ -0.58
MTHFD1-202ENST00000545908 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.58
MTHFD1-202ENST00000545908 FRAT2O75474 233 aaPredicted RBP11.39□□□□□ -0.59
MTHFD1-202ENST00000545908 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
MTHFD1-202ENST00000545908 PIP4K2BP78356 416 aa11.39□□□□□ -0.59
MTHFD1-202ENST00000545908 ANKLE2Q86XL3 938 aa11.39□□□□□ -0.59
MTHFD1-202ENST00000545908 CTTNBP2Q8WZ74 1663 aa11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 DIAPH1O60610 1272 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 GNL2Q13823 731 aaKnown RBP11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 HMMRO75330 724 aa11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 RWDD1Q9H446 243 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 ZNF608Q9ULD9 1512 aaPredicted RBP11.38□□□□□ -0.59
MTHFD1-202ENST00000545908 DAPK1P53355 1430 aa11.37□□□□□ -0.59
MTHFD1-202ENST00000545908 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
MTHFD1-202ENST00000545908 CLSTN1O94985 981 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms