RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 CARMIL1Q5VZK9 1371 aa10.89□□□□□ -0.67
LDHC-209ENST00000545848 RIMBP2O15034 1052 aa10.88□□□□□ -0.67
LDHC-209ENST00000545848 DISP1Q96F81 1524 aa10.88□□□□□ -0.67
LDHC-209ENST00000545848 KIAA0586Q9BVV6 1533 aa10.88□□□□□ -0.67
LDHC-209ENST00000545848 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
LDHC-209ENST00000545848 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
LDHC-209ENST00000545848 KIAA0556O60303 1618 aa10.85□□□□□ -0.67
LDHC-209ENST00000545848 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
LDHC-209ENST00000545848 RAPGEF2Q9Y4G8 1499 aa10.85□□□□□ -0.67
LDHC-209ENST00000545848 C2orf72A6NCS6 295 aa10.84□□□□□ -0.67
LDHC-209ENST00000545848 KIF3CO14782 793 aa10.84□□□□□ -0.67
LDHC-209ENST00000545848 HS3ST6Q96QI5 342 aa10.84□□□□□ -0.67
LDHC-209ENST00000545848 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
LDHC-209ENST00000545848 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
LDHC-209ENST00000545848 UGGT2Q9NYU1 1516 aa10.82□□□□□ -0.68
LDHC-209ENST00000545848 POTEB3A0JP26 581 aa10.81□□□□□ -0.68
LDHC-209ENST00000545848 POTEBQ6S5H4 581 aa10.81□□□□□ -0.68
LDHC-209ENST00000545848 JPH4Q96JJ6 628 aa10.81□□□□□ -0.68
LDHC-209ENST00000545848 ABCC2Q92887 1545 aa10.8□□□□□ -0.68
LDHC-209ENST00000545848 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
LDHC-209ENST00000545848 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
LDHC-209ENST00000545848 PPRC1Q5VV67 1664 aaKnown RBP10.79□□□□□ -0.68
LDHC-209ENST00000545848 DIP2BQ9P265 1576 aa10.78□□□□□ -0.68
LDHC-209ENST00000545848 ERBB3P21860 1342 aa10.78□□□□□ -0.68
LDHC-209ENST00000545848 SAMD9Q5K651 1589 aa10.77□□□□□ -0.68
LDHC-209ENST00000545848 KIF21BO75037 1637 aa10.77□□□□□ -0.68
LDHC-209ENST00000545848 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
LDHC-209ENST00000545848 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
LDHC-209ENST00000545848 TSPOAP1O95153 1857 aa10.76□□□□□ -0.69
LDHC-209ENST00000545848 ARSIQ5FYB1 569 aa10.75□□□□□ -0.69
LDHC-209ENST00000545848 FAM9AQ8IZU1 332 aaPredicted RBP10.74□□□□□ -0.69
LDHC-209ENST00000545848 LRRIQ1Q96JM4 1722 aa10.74□□□□□ -0.69
LDHC-209ENST00000545848 MAPKBP1O60336 1514 aa10.74□□□□□ -0.69
LDHC-209ENST00000545848 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
LDHC-209ENST00000545848 ABCA8O94911 1581 aa10.73□□□□□ -0.69
LDHC-209ENST00000545848 VARS2Q5ST30 1063 aaKnown RBP10.72□□□□□ -0.69
LDHC-209ENST00000545848 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
LDHC-209ENST00000545848 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
LDHC-209ENST00000545848 TTBK1Q5TCY1 1321 aaPredicted RBP10.72□□□□□ -0.69
LDHC-209ENST00000545848 KHSRPQ92945 711 aaKnown RBP eCLIP10.71□□□□□ -0.69
LDHC-209ENST00000545848 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
LDHC-209ENST00000545848 SLC34A2O95436 690 aa10.69□□□□□ -0.7
LDHC-209ENST00000545848 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
LDHC-209ENST00000545848 GTPBP6O43824 516 aaPredicted RBP10.68□□□□□ -0.7
LDHC-209ENST00000545848 FOXK1P85037 733 aa10.68□□□□□ -0.7
LDHC-209ENST00000545848 PTPRGP23470 1445 aa10.67□□□□□ -0.7
LDHC-209ENST00000545848 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
LDHC-209ENST00000545848 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
LDHC-209ENST00000545848 UHRF1BP1LA0JNW5 1464 aa10.67□□□□□ -0.7
LDHC-209ENST00000545848 KDM5BQ9UGL1 1544 aa10.66□□□□□ -0.7
LDHC-209ENST00000545848 ABCC10Q5T3U5 1492 aa10.66□□□□□ -0.7
LDHC-209ENST00000545848 MAP3K4Q9Y6R4 1608 aa10.66□□□□□ -0.7
LDHC-209ENST00000545848 NUDT7P0C024 238 aa10.65□□□□□ -0.7
LDHC-209ENST00000545848 PLPP6Q8IY26 295 aa10.65□□□□□ -0.7
LDHC-209ENST00000545848 FHOD3Q2V2M9 1422 aa10.65□□□□□ -0.7
LDHC-209ENST00000545848 UACAQ9BZF9 1416 aa10.65□□□□□ -0.7
LDHC-209ENST00000545848 RAPGEF6Q8TEU7 1601 aa10.65□□□□□ -0.7
LDHC-209ENST00000545848 ZNF316A6NFI3 1004 aaPredicted RBP10.64□□□□□ -0.71
LDHC-209ENST00000545848 DSG2Q14126 1118 aa10.64□□□□□ -0.71
LDHC-209ENST00000545848 EEA1Q15075 1411 aa10.64□□□□□ -0.71
LDHC-209ENST00000545848 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
LDHC-209ENST00000545848 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
LDHC-209ENST00000545848 ZNF687Q8N1G0 1237 aa10.63□□□□□ -0.71
LDHC-209ENST00000545848 CARMIL2Q6F5E8 1435 aa10.63□□□□□ -0.71
LDHC-209ENST00000545848 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
LDHC-209ENST00000545848 MMRN1Q13201 1228 aa10.62□□□□□ -0.71
LDHC-209ENST00000545848 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
LDHC-209ENST00000545848 ARHGAP35Q9NRY4 1499 aa10.61□□□□□ -0.71
LDHC-209ENST00000545848 EPRSP07814 1512 aaKnown RBP10.6□□□□□ -0.71
LDHC-209ENST00000545848 CRISPLD2Q9H0B8 497 aa10.6□□□□□ -0.71
LDHC-209ENST00000545848 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
LDHC-209ENST00000545848 GLI2P10070 1586 aa10.6□□□□□ -0.71
LDHC-209ENST00000545848 RANGAP1P46060 587 aaPredicted RBP10.59□□□□□ -0.71
LDHC-209ENST00000545848 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
LDHC-209ENST00000545848 COL17A1Q9UMD9 1497 aaPredicted RBP10.58□□□□□ -0.72
LDHC-209ENST00000545848 ARID3CA6NKF2 412 aa10.58□□□□□ -0.72
LDHC-209ENST00000545848 RTN4Q9NQC3 1192 aaKnown RBP10.58□□□□□ -0.72
LDHC-209ENST00000545848 LHX6Q9UPM6 363 aa10.58□□□□□ -0.72
LDHC-209ENST00000545848 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
LDHC-209ENST00000545848 NCKAP5LQ9HCH0 1330 aa10.58□□□□□ -0.72
LDHC-209ENST00000545848 ATP10BO94823 1461 aa10.57□□□□□ -0.72
LDHC-209ENST00000545848 PCF11O94913 1555 aaKnown RBP10.56□□□□□ -0.72
LDHC-209ENST00000545848 WDR7Q9Y4E6 1490 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 KDM6BO15054 1643 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 EFCAB5A4FU69 1503 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 CFAP43Q8NDM7 1665 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 PDE4AP27815 886 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 TTC37Q6PGP7 1564 aa10.55□□□□□ -0.72
LDHC-209ENST00000545848 KDM4FA0A1W2PPD8 638 aa10.54□□□□□ -0.72
LDHC-209ENST00000545848 FAM69CQ0P6D2 419 aa10.54□□□□□ -0.72
LDHC-209ENST00000545848 KIF14Q15058 1648 aa10.54□□□□□ -0.72
LDHC-209ENST00000545848 ABCA9Q8IUA7 1624 aa10.53□□□□□ -0.72
LDHC-209ENST00000545848 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
LDHC-209ENST00000545848 TBC1D12O60347 775 aa10.52□□□□□ -0.73
LDHC-209ENST00000545848 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
LDHC-209ENST00000545848 SIGLEC1Q9BZZ2 1709 aa10.52□□□□□ -0.73
LDHC-209ENST00000545848 FRMPD1Q5SYB0 1578 aa10.52□□□□□ -0.73
LDHC-209ENST00000545848 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
LDHC-209ENST00000545848 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms