RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 NLRP13Q86W25 1043 aa8.48□□□□□ -1.05
SMAD5-211ENST00000545279 TRAK1Q9UPV9 953 aa8.47□□□□□ -1.05
SMAD5-211ENST00000545279 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
SMAD5-211ENST00000545279 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
SMAD5-211ENST00000545279 LAS1LQ9Y4W2 734 aaKnown RBP8.47□□□□□ -1.05
SMAD5-211ENST00000545279 LTV1Q96GA3 475 aaPredicted RBP8.46□□□□□ -1.05
SMAD5-211ENST00000545279 CDK11BP21127 795 aaKnown RBP8.46□□□□□ -1.05
SMAD5-211ENST00000545279 MSH6P52701 1360 aa8.46□□□□□ -1.05
SMAD5-211ENST00000545279 TEFQ10587 303 aa8.46□□□□□ -1.05
SMAD5-211ENST00000545279 MIA2Q96PC5 1412 aa8.46□□□□□ -1.06
SMAD5-211ENST00000545279 MINK1Q8N4C8 1332 aaPredicted RBP8.45□□□□□ -1.06
SMAD5-211ENST00000545279 TAF7LQ5H9L4 462 aa8.45□□□□□ -1.06
SMAD5-211ENST00000545279 ADGRL1O94910 1474 aa8.45□□□□□ -1.06
SMAD5-211ENST00000545279 DIEXFQ68CQ4 756 aaKnown RBP8.45□□□□□ -1.06
SMAD5-211ENST00000545279 CNTLNQ9NXG0 1405 aa8.45□□□□□ -1.06
SMAD5-211ENST00000545279 WDHD1O75717 1129 aaPredicted RBP8.44□□□□□ -1.06
SMAD5-211ENST00000545279 WWC1Q8IX03 1113 aa8.44□□□□□ -1.06
SMAD5-211ENST00000545279 CASKIN1Q8WXD9 1431 aa8.44□□□□□ -1.06
SMAD5-211ENST00000545279 NLRP6P59044 892 aa8.44□□□□□ -1.06
SMAD5-211ENST00000545279 LMTK3Q96Q04 1460 aa8.43□□□□□ -1.06
SMAD5-211ENST00000545279 EFCAB5A4FU69 1503 aa8.43□□□□□ -1.06
SMAD5-211ENST00000545279 FAM9BQ8IZU0 186 aa8.43□□□□□ -1.06
SMAD5-211ENST00000545279 CENPJQ9HC77 1338 aaPredicted RBP8.43□□□□□ -1.06
SMAD5-211ENST00000545279 ROCK1Q13464 1354 aa8.43□□□□□ -1.06
SMAD5-211ENST00000545279 FANCAO15360 1455 aa8.43□□□□□ -1.06
SMAD5-211ENST00000545279 TNRQ92752 1358 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 ANKRD50Q9ULJ7 1429 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 FYCO1Q9BQS8 1478 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.42□□□□□ -1.069e-7■■■□□ 17.4
SMAD5-211ENST00000545279 ZNF692Q9BU19 519 aaPredicted RBP8.42□□□□□ -1.06
SMAD5-211ENST00000545279 CASC1Q6TDU7 716 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 CUX1P39880 1505 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 ERICH3Q5RHP9 1530 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 SMG6Q86US8 1419 aaKnown RBP8.42□□□□□ -1.06
SMAD5-211ENST00000545279 CGNL1Q0VF96 1302 aa8.42□□□□□ -1.06
SMAD5-211ENST00000545279 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 FTSJ3Q8IY81 847 aaKnown RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 STRN4Q9NRL3 753 aa8.41□□□□□ -1.06
SMAD5-211ENST00000545279 UHRF1BP1Q6BDS2 1440 aa8.41□□□□□ -1.06
SMAD5-211ENST00000545279 TATP17735 454 aaPredicted RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 ISY1Q9ULR0 285 aaKnown RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
SMAD5-211ENST00000545279 FRAT2O75474 233 aaPredicted RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 HSP90AB1P08238 724 aaKnown RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
SMAD5-211ENST00000545279 CWC22Q9HCG8 908 aaKnown RBP8.41□□□□□ -1.06
SMAD5-211ENST00000545279 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
SMAD5-211ENST00000545279 SLC26A8Q96RN1 970 aa8.4□□□□□ -1.06
SMAD5-211ENST00000545279 RRBP1Q9P2E9 1410 aaKnown RBP8.4□□□□□ -1.06
SMAD5-211ENST00000545279 URB2Q14146 1524 aaKnown RBP8.4□□□□□ -1.06
SMAD5-211ENST00000545279 GORABQ5T7V8 394 aa8.4□□□□□ -1.06
SMAD5-211ENST00000545279 KCNH5Q8NCM2 988 aa8.4□□□□□ -1.06
SMAD5-211ENST00000545279 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
SMAD5-211ENST00000545279 ASXL2Q76L83 1435 aa8.4□□□□□ -1.06
SMAD5-211ENST00000545279 C11orf95C9JLR9 678 aaPredicted RBP8.4□□□□□ -1.07
SMAD5-211ENST00000545279 DDX10Q13206 875 aaKnown RBP8.4□□□□□ -1.07
SMAD5-211ENST00000545279 HFM1A2PYH4 1435 aa8.4□□□□□ -1.07
SMAD5-211ENST00000545279 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
SMAD5-211ENST00000545279 IPO8O15397 1037 aaKnown RBP8.39□□□□□ -1.07
SMAD5-211ENST00000545279 KTN1Q86UP2 1357 aaKnown RBP8.39□□□□□ -1.07
SMAD5-211ENST00000545279 ANKRD30BQ9BXX2 1392 aa8.39□□□□□ -1.07
SMAD5-211ENST00000545279 NCOA2Q15596 1464 aa8.39□□□□□ -1.07
SMAD5-211ENST00000545279 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
SMAD5-211ENST00000545279 RBM33Q96EV2 1170 aaKnown RBP8.39□□□□□ -1.07
SMAD5-211ENST00000545279 POLD1P28340 1107 aa8.39□□□□□ -1.07
SMAD5-211ENST00000545279 NEXNQ0ZGT2 675 aa8.39□□□□□ -1.07
SMAD5-211ENST00000545279 ABTB2Q8N961 1025 aa8.39□□□□□ -1.07
SMAD5-211ENST00000545279 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
SMAD5-211ENST00000545279 PLEKHO1Q53GL0 409 aaPredicted RBP8.38□□□□□ -1.07
SMAD5-211ENST00000545279 LRRC59Q96AG4 307 aaKnown RBP8.38□□□□□ -1.07
SMAD5-211ENST00000545279 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
SMAD5-211ENST00000545279 SPG7Q9UQ90 795 aa8.37□□□□□ -1.07
SMAD5-211ENST00000545279 CEBPAP49715 358 aaPredicted RBP8.37□□□□□ -1.07
SMAD5-211ENST00000545279 SMC4Q9NTJ3 1288 aa8.37□□□□□ -1.07
SMAD5-211ENST00000545279 SALL2Q9Y467 1007 aaPredicted RBP8.37□□□□□ -1.07
SMAD5-211ENST00000545279 HNRNPUQ00839 825 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMAD5-211ENST00000545279 CTDP1Q9Y5B0 961 aaPredicted RBP8.37□□□□□ -1.07
SMAD5-211ENST00000545279 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
SMAD5-211ENST00000545279 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
SMAD5-211ENST00000545279 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
SMAD5-211ENST00000545279 AMOTL1Q8IY63 956 aa8.36□□□□□ -1.07
SMAD5-211ENST00000545279 USP35Q9P2H5 1018 aa8.36□□□□□ -1.07
SMAD5-211ENST00000545279 DDX58O95786 925 aaKnown RBP8.36□□□□□ -1.07
SMAD5-211ENST00000545279 EPRSP07814 1512 aaKnown RBP8.36□□□□□ -1.07
SMAD5-211ENST00000545279 NPHP3Q7Z494 1330 aa8.36□□□□□ -1.07
SMAD5-211ENST00000545279 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
SMAD5-211ENST00000545279 ADAMTS2O95450 1211 aa8.35□□□□□ -1.07
SMAD5-211ENST00000545279 HSPA2P54652 639 aa8.35□□□□□ -1.07
SMAD5-211ENST00000545279 BAG6P46379 1132 aa8.35□□□□□ -1.07
SMAD5-211ENST00000545279 RALBP1Q15311 655 aa8.35□□□□□ -1.07
SMAD5-211ENST00000545279 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
SMAD5-211ENST00000545279 PHF8Q9UPP1 1060 aa8.35□□□□□ -1.07
SMAD5-211ENST00000545279 KCNJ4P48050 445 aa8.35□□□□□ -1.07
SMAD5-211ENST00000545279 WDR7Q9Y4E6 1490 aa8.34□□□□□ -1.07
SMAD5-211ENST00000545279 CHMP3Q9Y3E7 222 aa8.34□□□□□ -1.07
SMAD5-211ENST00000545279 DHX29Q7Z478 1369 aaKnown RBP8.34□□□□□ -1.08
SMAD5-211ENST00000545279 IQGAP2Q13576 1575 aa8.33□□□□□ -1.08
SMAD5-211ENST00000545279 C9orf84Q5VXU9 1444 aa8.33□□□□□ -1.08
SMAD5-211ENST00000545279 DAPK1P53355 1430 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms