RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
CPSF7-223ENST00000544669 UNC13BO14795 1591 aa17.65■□□□□ 0.42
CPSF7-223ENST00000544669 TMC1Q8TDI8 760 aa17.65■□□□□ 0.42
CPSF7-223ENST00000544669 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.42
CPSF7-223ENST00000544669 ATP10AO60312 1499 aa17.64■□□□□ 0.41
CPSF7-223ENST00000544669 DUOX2Q9NRD8 1548 aa17.63■□□□□ 0.41
CPSF7-223ENST00000544669 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
CPSF7-223ENST00000544669 ANP32EQ9BTT0 268 aa17.63■□□□□ 0.41
CPSF7-223ENST00000544669 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
CPSF7-223ENST00000544669 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
CPSF7-223ENST00000544669 EFCAB2Q5VUJ9 269 aa17.62■□□□□ 0.41
CPSF7-223ENST00000544669 UHRF1BP1LA0JNW5 1464 aa17.62■□□□□ 0.41
CPSF7-223ENST00000544669 BCORL1Q5H9F3 1711 aa17.61■□□□□ 0.41
CPSF7-223ENST00000544669 NUDCQ9Y266 331 aa17.61■□□□□ 0.41
CPSF7-223ENST00000544669 LAMC1P11047 1609 aa17.61■□□□□ 0.41
CPSF7-223ENST00000544669 ST20-MTHFSA0A0A6YYL1 179 aa17.61■□□□□ 0.41
CPSF7-223ENST00000544669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.41
CPSF7-223ENST00000544669 PRAG1Q86YV5 1406 aa17.6■□□□□ 0.41
CPSF7-223ENST00000544669 PNISRQ8TF01 805 aaKnown RBP17.6■□□□□ 0.41
CPSF7-223ENST00000544669 POLR3GLQ9BT43 218 aa17.6■□□□□ 0.41
CPSF7-223ENST00000544669 PLCH2O75038 1416 aa17.6■□□□□ 0.41
CPSF7-223ENST00000544669 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
CPSF7-223ENST00000544669 INSRP06213 1382 aa17.59■□□□□ 0.41
CPSF7-223ENST00000544669 SYCP2Q9BX26 1530 aa17.59■□□□□ 0.41
CPSF7-223ENST00000544669 KDM2AQ9Y2K7 1162 aa17.59■□□□□ 0.41
CPSF7-223ENST00000544669 IQGAP3Q86VI3 1631 aa17.58■□□□□ 0.41
CPSF7-223ENST00000544669 MYO5CQ9NQX4 1742 aa17.58■□□□□ 0.41
CPSF7-223ENST00000544669 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.4
CPSF7-223ENST00000544669 CHD1O14646 1710 aa17.56■□□□□ 0.4
CPSF7-223ENST00000544669 MAGI2Q86UL8 1455 aa17.56■□□□□ 0.4
CPSF7-223ENST00000544669 ARAP3Q8WWN8 1544 aa17.56■□□□□ 0.4
CPSF7-223ENST00000544669 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
CPSF7-223ENST00000544669 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
CPSF7-223ENST00000544669 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
CPSF7-223ENST00000544669 RTEL1-TNFRSF6BF6WH68 1400 aa17.55■□□□□ 0.4
CPSF7-223ENST00000544669 NLRP13Q86W25 1043 aa17.55■□□□□ 0.4
CPSF7-223ENST00000544669 LRPPRCP42704 1394 aaKnown RBP17.55■□□□□ 0.4
CPSF7-223ENST00000544669 TTC37Q6PGP7 1564 aa17.54■□□□□ 0.4
CPSF7-223ENST00000544669 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
CPSF7-223ENST00000544669 ZMYM4Q5VZL5 1548 aa17.53■□□□□ 0.4
CPSF7-223ENST00000544669 TMF1P82094 1093 aa17.51■□□□□ 0.39
CPSF7-223ENST00000544669 CDCA8Q53HL2 280 aa17.51■□□□□ 0.39
CPSF7-223ENST00000544669 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
CPSF7-223ENST00000544669 PARD3Q8TEW0 1356 aa17.49■□□□□ 0.39
CPSF7-223ENST00000544669 E9PCH4 1651 aa17.49■□□□□ 0.39
CPSF7-223ENST00000544669 PRDM15P57071 1507 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-223ENST00000544669 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-223ENST00000544669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.392e-8■■□□□ 11.7
CPSF7-223ENST00000544669 A2MP01023 1474 aa17.48■□□□□ 0.39
CPSF7-223ENST00000544669 COL17A1Q9UMD9 1497 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-223ENST00000544669 ABCC1P33527 1531 aa17.46■□□□□ 0.39
CPSF7-223ENST00000544669 RGL3Q3MIN7 710 aa17.45■□□□□ 0.38
CPSF7-223ENST00000544669 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
CPSF7-223ENST00000544669 KANK1Q14678 1352 aa17.45■□□□□ 0.38
CPSF7-223ENST00000544669 SPAG9O60271 1321 aaKnown RBP17.45■□□□□ 0.38
CPSF7-223ENST00000544669 ZCCHC11Q5TAX3 1644 aaKnown RBP17.43■□□□□ 0.38
CPSF7-223ENST00000544669 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
CPSF7-223ENST00000544669 TESK2Q96S53 571 aa17.42■□□□□ 0.38
CPSF7-223ENST00000544669 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
CPSF7-223ENST00000544669 NEURL4Q96JN8 1562 aa17.41■□□□□ 0.38
CPSF7-223ENST00000544669 CCDC136Q96JN2 1154 aa17.41■□□□□ 0.38
CPSF7-223ENST00000544669 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
CPSF7-223ENST00000544669 NBPF1Q3BBV0 1214 aa17.4■□□□□ 0.38
CPSF7-223ENST00000544669 B4GALNT3Q6L9W6 998 aa17.4■□□□□ 0.38
CPSF7-223ENST00000544669 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
CPSF7-223ENST00000544669 MYT1LQ9UL68 1186 aa17.4■□□□□ 0.38
CPSF7-223ENST00000544669 PTPRTO14522 1441 aa17.39■□□□□ 0.37
CPSF7-223ENST00000544669 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
CPSF7-223ENST00000544669 TRPM2O94759 1503 aa17.38■□□□□ 0.37
CPSF7-223ENST00000544669 RNF17Q9BXT8 1623 aaKnown RBP17.36■□□□□ 0.37
CPSF7-223ENST00000544669 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
CPSF7-223ENST00000544669 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
CPSF7-223ENST00000544669 CNGB1Q14028 1251 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-223ENST00000544669 PANK3Q9H999 370 aa17.35■□□□□ 0.37
CPSF7-223ENST00000544669 RCAN3Q9UKA8 241 aa17.34■□□□□ 0.37
CPSF7-223ENST00000544669 SCAF11Q99590 1463 aaKnown RBP17.34■□□□□ 0.37
CPSF7-223ENST00000544669 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
CPSF7-223ENST00000544669 ZFYVE16Q7Z3T8 1539 aa17.33■□□□□ 0.36
CPSF7-223ENST00000544669 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
CPSF7-223ENST00000544669 DEPDC5O75140 1603 aa17.33■□□□□ 0.36
CPSF7-223ENST00000544669 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
CPSF7-223ENST00000544669 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
CPSF7-223ENST00000544669 TET3O43151 1660 aa17.32■□□□□ 0.36
CPSF7-223ENST00000544669 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
CPSF7-223ENST00000544669 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
CPSF7-223ENST00000544669 FANCAO15360 1455 aa17.29■□□□□ 0.36
CPSF7-223ENST00000544669 MADDQ8WXG6 1647 aa17.29■□□□□ 0.36
CPSF7-223ENST00000544669 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
CPSF7-223ENST00000544669 ATP7AQ04656 1500 aa17.28■□□□□ 0.36
CPSF7-223ENST00000544669 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
CPSF7-223ENST00000544669 CEP152O94986 1710 aa17.28■□□□□ 0.36
CPSF7-223ENST00000544669 ABCA9Q8IUA7 1624 aa17.27■□□□□ 0.36
CPSF7-223ENST00000544669 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
CPSF7-223ENST00000544669 SYNMO15061 1565 aa17.27■□□□□ 0.35
CPSF7-223ENST00000544669 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.35
CPSF7-223ENST00000544669 CC2D1BQ5T0F9 858 aaKnown RBP17.26■□□□□ 0.35
CPSF7-223ENST00000544669 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
CPSF7-223ENST00000544669 IQGAP1P46940 1657 aa17.26■□□□□ 0.35
CPSF7-223ENST00000544669 MYOM2P54296 1465 aa17.25■□□□□ 0.35
CPSF7-223ENST00000544669 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms