RNA–Protein interactions for RNA: ENST00000544102.1

VNN3-213, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-213ENST00000544102 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
VNN3-213ENST00000544102 FCHSD2O94868 740 aa8.46□□□□□ -1.06
VNN3-213ENST00000544102 EMP3P54852 163 aa8.46□□□□□ -1.06
VNN3-213ENST00000544102 MARVELD3Q96A59 401 aa8.46□□□□□ -1.06
VNN3-213ENST00000544102 ERBB3P21860 1342 aa8.46□□□□□ -1.06
VNN3-213ENST00000544102 HIC1Q14526 733 aa8.45□□□□□ -1.06
VNN3-213ENST00000544102 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
VNN3-213ENST00000544102 GNPATO15228 680 aa8.43□□□□□ -1.06
VNN3-213ENST00000544102 CERKQ8TCT0 537 aa8.43□□□□□ -1.06
VNN3-213ENST00000544102 PTPREP23469 700 aa8.42□□□□□ -1.06
VNN3-213ENST00000544102 POTEB3A0JP26 581 aa8.41□□□□□ -1.06
VNN3-213ENST00000544102 FAM205CA6NFA0 338 aa8.41□□□□□ -1.06
VNN3-213ENST00000544102 POTEBQ6S5H4 581 aa8.41□□□□□ -1.06
VNN3-213ENST00000544102 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
VNN3-213ENST00000544102 COL9A1P20849 921 aa8.4□□□□□ -1.06
VNN3-213ENST00000544102 FECHP22830 423 aa8.4□□□□□ -1.06
VNN3-213ENST00000544102 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
VNN3-213ENST00000544102 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.06
VNN3-213ENST00000544102 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
VNN3-213ENST00000544102 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
VNN3-213ENST00000544102 MAP2K5Q13163 448 aa8.39□□□□□ -1.07
VNN3-213ENST00000544102 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
VNN3-213ENST00000544102 MINK1Q8N4C8 1332 aaPredicted RBP8.38□□□□□ -1.07
VNN3-213ENST00000544102 PBX2P40425 430 aa8.38□□□□□ -1.07
VNN3-213ENST00000544102 TTC13Q8NBP0 860 aa8.38□□□□□ -1.07
VNN3-213ENST00000544102 ARHGAP33O14559 1287 aa8.37□□□□□ -1.07
VNN3-213ENST00000544102 PRSS12P56730 875 aa8.37□□□□□ -1.07
VNN3-213ENST00000544102 KCNK17Q96T54 332 aa8.37□□□□□ -1.07
VNN3-213ENST00000544102 IRF6O14896 467 aa8.36□□□□□ -1.07
VNN3-213ENST00000544102 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
VNN3-213ENST00000544102 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
VNN3-213ENST00000544102 PSEN2P49810 448 aa8.35□□□□□ -1.07
VNN3-213ENST00000544102 PADI6Q6TGC4 694 aa8.35□□□□□ -1.07
VNN3-213ENST00000544102 KCNH8Q96L42 1107 aa8.35□□□□□ -1.07
VNN3-213ENST00000544102 AK7Q96M32 723 aa8.35□□□□□ -1.07
VNN3-213ENST00000544102 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
VNN3-213ENST00000544102 ZBED2Q9BTP6 218 aa8.34□□□□□ -1.07
VNN3-213ENST00000544102 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
VNN3-213ENST00000544102 SLC4A5Q9BY07 1137 aa8.33□□□□□ -1.08
VNN3-213ENST00000544102 FAM198AQ9UFP1 575 aa8.33□□□□□ -1.08
VNN3-213ENST00000544102 TSKSQ9UJT2 592 aa8.33□□□□□ -1.08
VNN3-213ENST00000544102 AXIN2Q9Y2T1 843 aa8.33□□□□□ -1.08
VNN3-213ENST00000544102 TRIM6-TRIM34B2RNG4 842 aa8.32□□□□□ -1.08
VNN3-213ENST00000544102 DMRTA1Q5VZB9 504 aa8.32□□□□□ -1.08
VNN3-213ENST00000544102 TRIM66O15016 1216 aa8.31□□□□□ -1.08
VNN3-213ENST00000544102 PROX2Q3B8N5 592 aa8.31□□□□□ -1.08
VNN3-213ENST00000544102 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
VNN3-213ENST00000544102 OATP04181 439 aa8.28□□□□□ -1.08
VNN3-213ENST00000544102 AMHR2Q16671 573 aa8.28□□□□□ -1.08
VNN3-213ENST00000544102 METTL3Q86U44 580 aaKnown RBP8.28□□□□□ -1.08
VNN3-213ENST00000544102 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
VNN3-213ENST00000544102 C3orf80F5H4A9 247 aa8.27□□□□□ -1.09
VNN3-213ENST00000544102 TK2O00142 265 aa8.27□□□□□ -1.09
VNN3-213ENST00000544102 LSM11P83369 360 aaKnown RBP eCLIP8.27□□□□□ -1.09
VNN3-213ENST00000544102 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
VNN3-213ENST00000544102 PACS2Q86VP3 889 aa8.27□□□□□ -1.09
VNN3-213ENST00000544102 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
VNN3-213ENST00000544102 VPS9D1Q9Y2B5 631 aa8.27□□□□□ -1.09
VNN3-213ENST00000544102 NBPF26B4DH59 902 aa8.26□□□□□ -1.09
VNN3-213ENST00000544102 PDE4DQ08499 809 aa8.26□□□□□ -1.09
VNN3-213ENST00000544102 TATDN2Q93075 761 aa8.26□□□□□ -1.09
VNN3-213ENST00000544102 PHOX2BQ99453 314 aa8.26□□□□□ -1.09
VNN3-213ENST00000544102 EYA1Q99502 592 aa8.26□□□□□ -1.09
VNN3-213ENST00000544102 KIAA1468Q9P260 1216 aa8.26□□□□□ -1.09
VNN3-213ENST00000544102 POTEMA6NI47 508 aa8.25□□□□□ -1.09
VNN3-213ENST00000544102 BRPF1P55201 1214 aaPredicted RBP8.25□□□□□ -1.09
VNN3-213ENST00000544102 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
VNN3-213ENST00000544102 NUDT18Q6ZVK8 323 aa8.25□□□□□ -1.09
VNN3-213ENST00000544102 RBM46Q8TBY0 533 aaKnown RBP8.25□□□□□ -1.09
VNN3-213ENST00000544102 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
VNN3-213ENST00000544102 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
VNN3-213ENST00000544102 PNMA3Q9UL41 463 aa8.24□□□□□ -1.09
VNN3-213ENST00000544102 BHMG1C9JSJ3 638 aaPredicted RBP8.23□□□□□ -1.09
VNN3-213ENST00000544102 ADGRD1Q6QNK2 874 aa8.23□□□□□ -1.09
VNN3-213ENST00000544102 TMUB1Q9BVT8 246 aa8.23□□□□□ -1.09
VNN3-213ENST00000544102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
VNN3-213ENST00000544102 HRO43593 1189 aa8.21□□□□□ -1.1
VNN3-213ENST00000544102 NEUROD2Q15784 382 aa8.21□□□□□ -1.1
VNN3-213ENST00000544102 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.1
VNN3-213ENST00000544102 RCCD1A6NED2 376 aa8.2□□□□□ -1.1
VNN3-213ENST00000544102 SMAPO00193 183 aa8.2□□□□□ -1.1
VNN3-213ENST00000544102 LAPTM4BQ86VI4 370 aa8.2□□□□□ -1.1
VNN3-213ENST00000544102 DNAJB2P25686 324 aa8.19□□□□□ -1.1
VNN3-213ENST00000544102 CLCN1P35523 988 aa8.19□□□□□ -1.1
VNN3-213ENST00000544102 CDAN1Q8IWY9 1227 aa8.19□□□□□ -1.1
VNN3-213ENST00000544102 REPIN1Q9BWE0 567 aaKnown RBP8.19□□□□□ -1.1
VNN3-213ENST00000544102 NBPF3Q9H094 633 aa8.19□□□□□ -1.1
VNN3-213ENST00000544102 GPBP1L1Q9HC44 474 aaPredicted RBP8.19□□□□□ -1.1
VNN3-213ENST00000544102 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
VNN3-213ENST00000544102 MDM2Q00987 491 aaPredicted RBP8.18□□□□□ -1.1
VNN3-213ENST00000544102 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
VNN3-213ENST00000544102 FAM98CQ17RN3 349 aaKnown RBP8.18□□□□□ -1.1
VNN3-213ENST00000544102 ANKRD13DQ6ZTN6 518 aa8.18□□□□□ -1.1
VNN3-213ENST00000544102 KDM4CQ9H3R0 1056 aa8.18□□□□□ -1.1
VNN3-213ENST00000544102 TMEM134Q9H6X4 195 aa8.18□□□□□ -1.1
VNN3-213ENST00000544102 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
VNN3-213ENST00000544102 GIGYF2Q6Y7W6 1299 aaKnown RBP8.17□□□□□ -1.1
VNN3-213ENST00000544102 NLRP7Q8WX94 980 aa8.17□□□□□ -1.1
VNN3-213ENST00000544102 DAXXQ9UER7 740 aaPredicted RBP8.16□□□□□ -1.1
VNN3-213ENST00000544102 MRPL50Q8N5N7 158 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms