RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
NPIPB4-219ENST00000543660 PHF12Q96QT6 1004 aa8.32□□□□□ -1.08
NPIPB4-219ENST00000543660 PLCH2O75038 1416 aa8.31□□□□□ -1.08
NPIPB4-219ENST00000543660 ZNF335Q9H4Z2 1342 aaPredicted RBP8.3□□□□□ -1.08
NPIPB4-219ENST00000543660 TRAPPC8Q9Y2L5 1435 aa8.29□□□□□ -1.08
NPIPB4-219ENST00000543660 POTEMA6NI47 508 aa8.29□□□□□ -1.08
NPIPB4-219ENST00000543660 MNX1P50219 401 aaPredicted RBP8.29□□□□□ -1.08
NPIPB4-219ENST00000543660 MED1Q15648 1581 aaPredicted RBP8.28□□□□□ -1.08
NPIPB4-219ENST00000543660 AFAP1Q8N556 730 aa8.28□□□□□ -1.08
NPIPB4-219ENST00000543660 C3P01024 1663 aa8.27□□□□□ -1.08
NPIPB4-219ENST00000543660 HSPA1LP34931 641 aa8.27□□□□□ -1.09
NPIPB4-219ENST00000543660 EFCAB2Q5VUJ9 269 aa8.27□□□□□ -1.09
NPIPB4-219ENST00000543660 ASTLQ6HA08 431 aaPredicted RBP8.27□□□□□ -1.09
NPIPB4-219ENST00000543660 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
NPIPB4-219ENST00000543660 C7P10643 843 aa8.26□□□□□ -1.09
NPIPB4-219ENST00000543660 PELP1Q8IZL8 1130 aaKnown RBP8.26□□□□□ -1.09
NPIPB4-219ENST00000543660 PCDH10Q9P2E7 1040 aa8.26□□□□□ -1.09
NPIPB4-219ENST00000543660 ZNF518AQ6AHZ1 1483 aa8.26□□□□□ -1.09
NPIPB4-219ENST00000543660 CAMSAP1Q5T5Y3 1602 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 SLC39A7Q92504 469 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 METRNQ9UJH8 293 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 KDM5CP41229 1560 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 REREQ9P2R6 1566 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 DIP2CQ9Y2E4 1556 aa8.25□□□□□ -1.09
NPIPB4-219ENST00000543660 RANGAP1P46060 587 aaPredicted RBP8.24□□□□□ -1.09
NPIPB4-219ENST00000543660 MAMSTRQ6ZN01 415 aa8.24□□□□□ -1.09
NPIPB4-219ENST00000543660 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
NPIPB4-219ENST00000543660 AGLP35573 1532 aa8.24□□□□□ -1.09
NPIPB4-219ENST00000543660 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
NPIPB4-219ENST00000543660 NPATQ14207 1427 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 CNTLNQ9NXG0 1405 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 MLH3Q9UHC1 1453 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 ATMINO43313 823 aaPredicted RBP8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 PIP4K2BP78356 416 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 PKD2Q13563 968 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 MS4A3Q96HJ5 214 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 MYT1LQ9UL68 1186 aa8.22□□□□□ -1.09
NPIPB4-219ENST00000543660 ABCA6Q8N139 1617 aa8.21□□□□□ -1.09
NPIPB4-219ENST00000543660 PLA2R1Q13018 1463 aa8.21□□□□□ -1.09
NPIPB4-219ENST00000543660 TCOF1Q13428 1488 aaKnown RBP8.21□□□□□ -1.09
NPIPB4-219ENST00000543660 TOM1O60784 492 aa8.21□□□□□ -1.1
NPIPB4-219ENST00000543660 ZMYM3Q14202 1370 aa8.21□□□□□ -1.1
NPIPB4-219ENST00000543660 MYO5CQ9NQX4 1742 aa8.2□□□□□ -1.1
NPIPB4-219ENST00000543660 ARHGAP5Q13017 1502 aa8.19□□□□□ -1.1
NPIPB4-219ENST00000543660 KIF14Q15058 1648 aa8.18□□□□□ -1.1
NPIPB4-219ENST00000543660 RGS17Q9UGC6 210 aaPredicted RBP8.17□□□□□ -1.1
NPIPB4-219ENST00000543660 MROH2AA6NES4 1674 aa8.17□□□□□ -1.1
NPIPB4-219ENST00000543660 POTEJP0CG39 1038 aa8.16□□□□□ -1.1
NPIPB4-219ENST00000543660 ZNF142P52746 1687 aaPredicted RBP8.16□□□□□ -1.1
NPIPB4-219ENST00000543660 PTPRKQ15262 1439 aa8.16□□□□□ -1.1
NPIPB4-219ENST00000543660 ALKQ9UM73 1620 aa8.16□□□□□ -1.1
NPIPB4-219ENST00000543660 CDK11AQ9UQ88 783 aaPredicted RBP8.16□□□□□ -1.1
NPIPB4-219ENST00000543660 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.1
NPIPB4-219ENST00000543660 MYO3AQ8NEV4 1616 aa8.15□□□□□ -1.1
NPIPB4-219ENST00000543660 CEP170BQ9Y4F5 1589 aaPredicted RBP8.15□□□□□ -1.1
NPIPB4-219ENST00000543660 CPS1P31327 1500 aa8.15□□□□□ -1.1
NPIPB4-219ENST00000543660 TROQ12816 1431 aaPredicted RBP8.15□□□□□ -1.1
NPIPB4-219ENST00000543660 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.1
NPIPB4-219ENST00000543660 ABCC1P33527 1531 aa8.14□□□□□ -1.11
NPIPB4-219ENST00000543660 SHANK2Q9UPX8 1470 aa8.14□□□□□ -1.11
NPIPB4-219ENST00000543660 ATP1B4Q9UN42 357 aaPredicted RBP8.14□□□□□ -1.11
NPIPB4-219ENST00000543660 CCDC61Q9Y6R9 512 aa8.14□□□□□ -1.11
NPIPB4-219ENST00000543660 CDC42BPBQ9Y5S2 1711 aa8.14□□□□□ -1.11
NPIPB4-219ENST00000543660 TSPYL2Q9H2G4 693 aaPredicted RBP8.13□□□□□ -1.11
NPIPB4-219ENST00000543660 PROM2Q8N271 834 aa8.12□□□□□ -1.11
NPIPB4-219ENST00000543660 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
NPIPB4-219ENST00000543660 CLIP1P30622 1438 aa8.12□□□□□ -1.11
NPIPB4-219ENST00000543660 ITSN2Q9NZM3 1697 aa8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 DNMT1P26358 1616 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 NEURL4Q96JN8 1562 aa8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 ATN1P54259 1190 aaPredicted RBP8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 KIF12Q96FN5 646 aa8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 SUPT6HQ7KZ85 1726 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 CLTCQ00610 1675 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 FMN1Q68DA7 1419 aa8.11□□□□□ -1.11
NPIPB4-219ENST00000543660 SAMD9LQ8IVG5 1584 aa8.1□□□□□ -1.11
NPIPB4-219ENST00000543660 VWDEQ8N2E2 1590 aa8.1□□□□□ -1.11
NPIPB4-219ENST00000543660 GGT6Q6P531 493 aa8.1□□□□□ -1.11
NPIPB4-219ENST00000543660 PREX2Q70Z35 1606 aa8.1□□□□□ -1.11
NPIPB4-219ENST00000543660 SRCAPQ6ZRS2 3230 aa8.09□□□□□ -1.11
NPIPB4-219ENST00000543660 SPAG9O60271 1321 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-219ENST00000543660 POTEAQ6S8J7 498 aa8.09□□□□□ -1.11
NPIPB4-219ENST00000543660 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
NPIPB4-219ENST00000543660 ANKLE2Q86XL3 938 aa8.08□□□□□ -1.12
NPIPB4-219ENST00000543660 FAM163AQ96GL9 167 aaPredicted RBP8.08□□□□□ -1.12
NPIPB4-219ENST00000543660 EEA1Q15075 1411 aa8.08□□□□□ -1.12
NPIPB4-219ENST00000543660 A2MP01023 1474 aa8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 ARHGAP35Q9NRY4 1499 aa8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 POLR1AO95602 1720 aaPredicted RBP8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 PLEKHG5O94827 1062 aa8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 TIE1P35590 1138 aa8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 HNRNPMP52272 730 aaKnown RBP eCLIP8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 FBXO31Q5XUX0 539 aaPredicted RBP8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 BMP2KQ9NSY1 1161 aaPredicted RBP8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 LRRC7Q96NW7 1537 aa8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.07□□□□□ -1.12
NPIPB4-219ENST00000543660 MED14O60244 1454 aa8.06□□□□□ -1.12
NPIPB4-219ENST00000543660 ZNF777Q9ULD5 760 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms