RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 KDM6BO15054 1643 aa17.23■□□□□ 0.35
RFC5-209ENST00000543153 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
RFC5-209ENST00000543153 ABCC2Q92887 1545 aa17.22■□□□□ 0.35
RFC5-209ENST00000543153 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
RFC5-209ENST00000543153 BOLA1Q9Y3E2 137 aa17.22■□□□□ 0.35
RFC5-209ENST00000543153 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
RFC5-209ENST00000543153 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
RFC5-209ENST00000543153 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
RFC5-209ENST00000543153 TSPOAP1O95153 1857 aa17.19■□□□□ 0.34
RFC5-209ENST00000543153 CRISPLD2Q9H0B8 497 aa17.19■□□□□ 0.34
RFC5-209ENST00000543153 ASXL2Q76L83 1435 aa17.18■□□□□ 0.34
RFC5-209ENST00000543153 UACAQ9BZF9 1416 aa17.18■□□□□ 0.34
RFC5-209ENST00000543153 PLB1Q6P1J6 1458 aa17.18■□□□□ 0.34
RFC5-209ENST00000543153 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
RFC5-209ENST00000543153 E2F4Q16254 413 aa17.16■□□□□ 0.34
RFC5-209ENST00000543153 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
RFC5-209ENST00000543153 METRNQ9UJH8 293 aa17.15■□□□□ 0.34
RFC5-209ENST00000543153 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
RFC5-209ENST00000543153 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
RFC5-209ENST00000543153 COLQQ9Y215 455 aaPredicted RBP17.14■□□□□ 0.33
RFC5-209ENST00000543153 UGGT2Q9NYU1 1516 aa17.13■□□□□ 0.33
RFC5-209ENST00000543153 MFSD10Q14728 455 aa17.13■□□□□ 0.33
RFC5-209ENST00000543153 TMEM121BQ9BXQ6 578 aaPredicted RBP17.13■□□□□ 0.33
RFC5-209ENST00000543153 KIAA0556O60303 1618 aa17.12■□□□□ 0.33
RFC5-209ENST00000543153 TMC2Q8TDI7 906 aa17.12■□□□□ 0.33
RFC5-209ENST00000543153 KCNV2Q8TDN2 545 aa17.12■□□□□ 0.33
RFC5-209ENST00000543153 GPHNQ9NQX3 736 aaPredicted RBP17.12■□□□□ 0.33
RFC5-209ENST00000543153 GLI2P10070 1586 aa17.08■□□□□ 0.32
RFC5-209ENST00000543153 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
RFC5-209ENST00000543153 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
RFC5-209ENST00000543153 ZCCHC11Q5TAX3 1644 aaKnown RBP17.06■□□□□ 0.32
RFC5-209ENST00000543153 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
RFC5-209ENST00000543153 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
RFC5-209ENST00000543153 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
RFC5-209ENST00000543153 PPP1R15BQ5SWA1 713 aa17.04■□□□□ 0.32
RFC5-209ENST00000543153 TEX14Q8IWB6 1497 aa17.04■□□□□ 0.32
RFC5-209ENST00000543153 POTEFA5A3E0 1075 aa17.02■□□□□ 0.32
RFC5-209ENST00000543153 FAM9AQ8IZU1 332 aaPredicted RBP17.02■□□□□ 0.32
RFC5-209ENST00000543153 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
RFC5-209ENST00000543153 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
RFC5-209ENST00000543153 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
RFC5-209ENST00000543153 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
RFC5-209ENST00000543153 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
RFC5-209ENST00000543153 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
RFC5-209ENST00000543153 C2orf72A6NCS6 295 aa16.96■□□□□ 0.31
RFC5-209ENST00000543153 FOXK1P85037 733 aa16.96■□□□□ 0.31
RFC5-209ENST00000543153 CAMK2BQ13554 666 aa16.96■□□□□ 0.31
RFC5-209ENST00000543153 DSG2Q14126 1118 aa16.96■□□□□ 0.31
RFC5-209ENST00000543153 KCNH8Q96L42 1107 aa16.96■□□□□ 0.31
RFC5-209ENST00000543153 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
RFC5-209ENST00000543153 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
RFC5-209ENST00000543153 ABCA8O94911 1581 aa16.93■□□□□ 0.3
RFC5-209ENST00000543153 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
RFC5-209ENST00000543153 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
RFC5-209ENST00000543153 KIF3CO14782 793 aa16.91■□□□□ 0.3
RFC5-209ENST00000543153 PLPP6Q8IY26 295 aa16.9■□□□□ 0.3
RFC5-209ENST00000543153 ARIH1Q9Y4X5 557 aaPredicted RBP16.9■□□□□ 0.3
RFC5-209ENST00000543153 TULP1O00294 542 aaPredicted RBP16.89■□□□□ 0.29
RFC5-209ENST00000543153 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
RFC5-209ENST00000543153 RANGAP1P46060 587 aaPredicted RBP16.87■□□□□ 0.29
RFC5-209ENST00000543153 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
RFC5-209ENST00000543153 MAGI3Q5TCQ9 1506 aa16.86■□□□□ 0.29
RFC5-209ENST00000543153 TMEM92Q6UXU6 159 aa16.84■□□□□ 0.29
RFC5-209ENST00000543153 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
RFC5-209ENST00000543153 ATP10BO94823 1461 aa16.8■□□□□ 0.28
RFC5-209ENST00000543153 EEA1Q15075 1411 aa16.79■□□□□ 0.28
RFC5-209ENST00000543153 EMILIN3Q9NT22 766 aa16.79■□□□□ 0.28
RFC5-209ENST00000543153 SAMD9Q5K651 1589 aa16.79■□□□□ 0.28
RFC5-209ENST00000543153 SEMA3EO15041 775 aa16.78■□□□□ 0.28
RFC5-209ENST00000543153 RAPGEF6Q8TEU7 1601 aa16.78■□□□□ 0.28
RFC5-209ENST00000543153 SMYD5Q6GMV2 418 aa16.77■□□□□ 0.28
RFC5-209ENST00000543153 DPYSL4O14531 572 aa16.76■□□□□ 0.27
RFC5-209ENST00000543153 SPDYE16A6NNV3 312 aaPredicted RBP16.75■□□□□ 0.27
RFC5-209ENST00000543153 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
RFC5-209ENST00000543153 TESPA1A2RU30 521 aaPredicted RBP16.74■□□□□ 0.27
RFC5-209ENST00000543153 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
RFC5-209ENST00000543153 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
RFC5-209ENST00000543153 ABCA9Q8IUA7 1624 aa16.73■□□□□ 0.27
RFC5-209ENST00000543153 ARAP3Q8WWN8 1544 aa16.72■□□□□ 0.27
RFC5-209ENST00000543153 KIF21BO75037 1637 aa16.72■□□□□ 0.27
RFC5-209ENST00000543153 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
RFC5-209ENST00000543153 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
RFC5-209ENST00000543153 PHLDB1Q86UU1 1377 aa16.7■□□□□ 0.26
RFC5-209ENST00000543153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.7■□□□□ 0.26
RFC5-209ENST00000543153 MAMSTRQ6ZN01 415 aa16.69■□□□□ 0.26
RFC5-209ENST00000543153 RAPGEF3O95398 923 aa16.68■□□□□ 0.26
RFC5-209ENST00000543153 PDIA6Q15084 440 aa16.68■□□□□ 0.26
RFC5-209ENST00000543153 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
RFC5-209ENST00000543153 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
RFC5-209ENST00000543153 NEO1Q92859 1461 aa16.67■□□□□ 0.26
RFC5-209ENST00000543153 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
RFC5-209ENST00000543153 TBC1D12O60347 775 aa16.67■□□□□ 0.26
RFC5-209ENST00000543153 EFCAB5A4FU69 1503 aa16.66■□□□□ 0.26
RFC5-209ENST00000543153 OXER1Q8TDS5 423 aa16.66■□□□□ 0.26
RFC5-209ENST00000543153 SCUBE2Q9NQ36 999 aa16.66■□□□□ 0.26
RFC5-209ENST00000543153 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
RFC5-209ENST00000543153 UBTFP17480 764 aaKnown RBP16.63■□□□□ 0.25
RFC5-209ENST00000543153 ATP1B4Q9UN42 357 aaPredicted RBP16.63■□□□□ 0.25
RFC5-209ENST00000543153 SLC34A2O95436 690 aa16.62■□□□□ 0.25
RFC5-209ENST00000543153 ZNF316A6NFI3 1004 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms