RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
TCF4-208ENST00000543082 IQGAP2Q13576 1575 aa12.76□□□□□ -0.37
TCF4-208ENST00000543082 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
TCF4-208ENST00000543082 CRBNQ96SW2 442 aa12.74□□□□□ -0.37
TCF4-208ENST00000543082 TDRD9Q8NDG6 1382 aaKnown RBP12.73□□□□□ -0.37
TCF4-208ENST00000543082 BLMP54132 1417 aaPredicted RBP12.73□□□□□ -0.37
TCF4-208ENST00000543082 PARD3Q8TEW0 1356 aa12.73□□□□□ -0.37
TCF4-208ENST00000543082 KDM2BQ8NHM5 1336 aa12.73□□□□□ -0.37
TCF4-208ENST00000543082 FAM161AQ3B820 660 aa12.73□□□□□ -0.37
TCF4-208ENST00000543082 ZNF326Q5BKZ1 582 aaKnown RBP12.72□□□□□ -0.37
TCF4-208ENST00000543082 CENPQQ7L2Z9 268 aaPredicted RBP12.72□□□□□ -0.37
TCF4-208ENST00000543082 CROCC2H7BZ55 1655 aa12.72□□□□□ -0.37
TCF4-208ENST00000543082 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
TCF4-208ENST00000543082 PBRM1Q86U86 1689 aa12.71□□□□□ -0.37
TCF4-208ENST00000543082 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
TCF4-208ENST00000543082 ITSN2Q9NZM3 1697 aa12.7□□□□□ -0.38
TCF4-208ENST00000543082 CARD11Q9BXL7 1154 aa12.7□□□□□ -0.38
TCF4-208ENST00000543082 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
TCF4-208ENST00000543082 ADGRL2O95490 1459 aa12.69□□□□□ -0.38
TCF4-208ENST00000543082 PLIN1O60240 522 aa12.69□□□□□ -0.38
TCF4-208ENST00000543082 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
TCF4-208ENST00000543082 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
TCF4-208ENST00000543082 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
TCF4-208ENST00000543082 GLIPR1L2Q4G1C9 344 aa12.67□□□□□ -0.38
TCF4-208ENST00000543082 DCAF11Q8TEB1 546 aa12.67□□□□□ -0.38
TCF4-208ENST00000543082 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
TCF4-208ENST00000543082 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
TCF4-208ENST00000543082 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
TCF4-208ENST00000543082 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
TCF4-208ENST00000543082 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
TCF4-208ENST00000543082 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
TCF4-208ENST00000543082 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
TCF4-208ENST00000543082 PKD2Q13563 968 aa12.64□□□□□ -0.39
TCF4-208ENST00000543082 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
TCF4-208ENST00000543082 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
TCF4-208ENST00000543082 TRPM1Q7Z4N2 1603 aa12.63□□□□□ -0.39
TCF4-208ENST00000543082 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
TCF4-208ENST00000543082 KDM5DQ9BY66 1539 aa12.62□□□□□ -0.39
TCF4-208ENST00000543082 ZNF644Q9H582 1327 aaPredicted RBP12.62□□□□□ -0.39
TCF4-208ENST00000543082 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
TCF4-208ENST00000543082 C20orf194Q5TEA3 1177 aa12.62□□□□□ -0.39
TCF4-208ENST00000543082 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
TCF4-208ENST00000543082 KIAA0556O60303 1618 aa12.62□□□□□ -0.39
TCF4-208ENST00000543082 LAMC1P11047 1609 aa12.61□□□□□ -0.39
TCF4-208ENST00000543082 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
TCF4-208ENST00000543082 CLASP1Q7Z460 1538 aa12.59□□□□□ -0.39
TCF4-208ENST00000543082 ANKRD30AQ9BXX3 1397 aa12.59□□□□□ -0.39
TCF4-208ENST00000543082 RRAGDQ9NQL2 400 aaPredicted RBP12.59□□□□□ -0.39
TCF4-208ENST00000543082 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
TCF4-208ENST00000543082 COL17A1Q9UMD9 1497 aaPredicted RBP12.59□□□□□ -0.39
TCF4-208ENST00000543082 BECN1Q14457 450 aa12.59□□□□□ -0.39
TCF4-208ENST00000543082 POGKQ9P215 609 aa12.59□□□□□ -0.39
TCF4-208ENST00000543082 TROQ12816 1431 aaPredicted RBP12.58□□□□□ -0.39
TCF4-208ENST00000543082 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
TCF4-208ENST00000543082 ANKRD50Q9ULJ7 1429 aa12.58□□□□□ -0.4
TCF4-208ENST00000543082 DISP1Q96F81 1524 aa12.57□□□□□ -0.4
TCF4-208ENST00000543082 RGS3P49796 1198 aa12.57□□□□□ -0.4
TCF4-208ENST00000543082 GPATCH8Q9UKJ3 1502 aaKnown RBP12.57□□□□□ -0.4
TCF4-208ENST00000543082 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
TCF4-208ENST00000543082 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
TCF4-208ENST00000543082 ARID3CA6NKF2 412 aa12.55□□□□□ -0.4
TCF4-208ENST00000543082 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
TCF4-208ENST00000543082 CFDP1Q9UEE9 299 aaPredicted RBP12.54□□□□□ -0.4
TCF4-208ENST00000543082 PRDM15P57071 1507 aaPredicted RBP12.54□□□□□ -0.4
TCF4-208ENST00000543082 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
TCF4-208ENST00000543082 USP19O94966 1318 aa12.54□□□□□ -0.4
TCF4-208ENST00000543082 PTPRGP23470 1445 aa12.54□□□□□ -0.4
TCF4-208ENST00000543082 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
TCF4-208ENST00000543082 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
TCF4-208ENST00000543082 NUP155O75694 1391 aa12.53□□□□□ -0.4
TCF4-208ENST00000543082 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
TCF4-208ENST00000543082 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
TCF4-208ENST00000543082 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.4
TCF4-208ENST00000543082 RRP9O43818 475 aaKnown RBP12.52□□□□□ -0.4
TCF4-208ENST00000543082 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
TCF4-208ENST00000543082 EIF2AK4Q9P2K8 1649 aaKnown RBP12.52□□□□□ -0.4
TCF4-208ENST00000543082 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.4
TCF4-208ENST00000543082 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
TCF4-208ENST00000543082 PLEKHH1Q9ULM0 1364 aa12.52□□□□□ -0.41
TCF4-208ENST00000543082 CLCN1P35523 988 aa12.52□□□□□ -0.41
TCF4-208ENST00000543082 ZNF521Q96K83 1311 aa12.52□□□□□ -0.41
TCF4-208ENST00000543082 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
TCF4-208ENST00000543082 NAP1L5Q96NT1 182 aaPredicted RBP12.51□□□□□ -0.41
TCF4-208ENST00000543082 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
TCF4-208ENST00000543082 GOLGA6L3A6NEY3 463 aa12.5□□□□□ -0.41
TCF4-208ENST00000543082 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
TCF4-208ENST00000543082 MYO5CQ9NQX4 1742 aa12.5□□□□□ -0.41
TCF4-208ENST00000543082 ERBINQ96RT1 1412 aa12.49□□□□□ -0.41
TCF4-208ENST00000543082 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
TCF4-208ENST00000543082 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
TCF4-208ENST00000543082 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
TCF4-208ENST00000543082 ADAMTS8Q9UP79 889 aa12.49□□□□□ -0.41
TCF4-208ENST00000543082 DISP3Q9P2K9 1392 aa12.49□□□□□ -0.41
TCF4-208ENST00000543082 NINLQ9Y2I6 1382 aa12.49□□□□□ -0.41
TCF4-208ENST00000543082 FSD2A1L4K1 749 aa12.49□□□□□ -0.41
TCF4-208ENST00000543082 SLKQ9H2G2 1235 aaPredicted RBP12.49□□□□□ -0.41
TCF4-208ENST00000543082 ZMYM3Q14202 1370 aa12.48□□□□□ -0.41
TCF4-208ENST00000543082 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
TCF4-208ENST00000543082 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
TCF4-208ENST00000543082 C9orf84Q5VXU9 1444 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms