RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 WDR70Q9NW82 654 aa13.09□□□□□ -0.31
PAAF1-212ENST00000543079 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
PAAF1-212ENST00000543079 PTPREP23469 700 aa13.07□□□□□ -0.32
PAAF1-212ENST00000543079 E2F4Q16254 413 aa13.07□□□□□ -0.32
PAAF1-212ENST00000543079 ADAM33Q9BZ11 813 aa13.07□□□□□ -0.32
PAAF1-212ENST00000543079 PHF14O94880 888 aa13.06□□□□□ -0.32
PAAF1-212ENST00000543079 HRO43593 1189 aa13.05□□□□□ -0.32
PAAF1-212ENST00000543079 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
PAAF1-212ENST00000543079 ARIH1Q9Y4X5 557 aaPredicted RBP13.03□□□□□ -0.32
PAAF1-212ENST00000543079 TYW1BQ6NUM6 668 aa13.02□□□□□ -0.33
PAAF1-212ENST00000543079 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
PAAF1-212ENST00000543079 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
PAAF1-212ENST00000543079 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.33
PAAF1-212ENST00000543079 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
PAAF1-212ENST00000543079 PDIA6Q15084 440 aa13□□□□□ -0.33
PAAF1-212ENST00000543079 EPAS1Q99814 870 aa13□□□□□ -0.33
PAAF1-212ENST00000543079 NESP48681 1621 aa12.99□□□□□ -0.33
PAAF1-212ENST00000543079 ZBED2Q9BTP6 218 aa12.99□□□□□ -0.33
PAAF1-212ENST00000543079 DDX12PQ92771 950 aa12.96□□□□□ -0.33
PAAF1-212ENST00000543079 STAC3Q96MF2 364 aa12.96□□□□□ -0.33
PAAF1-212ENST00000543079 NCAPD3P42695 1498 aa12.96□□□□□ -0.34
PAAF1-212ENST00000543079 PPP1R3GB7ZBB8 358 aa12.94□□□□□ -0.34
PAAF1-212ENST00000543079 BHMG1C9JSJ3 638 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-212ENST00000543079 C6orf132Q5T0Z8 1188 aa12.92□□□□□ -0.34
PAAF1-212ENST00000543079 COL9A1P20849 921 aa12.9□□□□□ -0.34
PAAF1-212ENST00000543079 HCSTQ9UBK5 93 aa12.89□□□□□ -0.35
PAAF1-212ENST00000543079 RBM33Q96EV2 1170 aaKnown RBP12.88□□□□□ -0.35
PAAF1-212ENST00000543079 PLCB2Q00722 1185 aa12.87□□□□□ -0.35
PAAF1-212ENST00000543079 NBR1Q14596 966 aa12.87□□□□□ -0.35
PAAF1-212ENST00000543079 THOC2Q8NI27 1593 aaKnown RBP12.86□□□□□ -0.35
PAAF1-212ENST00000543079 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
PAAF1-212ENST00000543079 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
PAAF1-212ENST00000543079 PROX2Q3B8N5 592 aa12.85□□□□□ -0.35
PAAF1-212ENST00000543079 NBPF3Q9H094 633 aa12.85□□□□□ -0.35
PAAF1-212ENST00000543079 RABGEF1Q9UJ41 708 aa12.85□□□□□ -0.35
PAAF1-212ENST00000543079 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-212ENST00000543079 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
PAAF1-212ENST00000543079 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
PAAF1-212ENST00000543079 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
PAAF1-212ENST00000543079 MAP3K7O43318 606 aa12.82□□□□□ -0.36
PAAF1-212ENST00000543079 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
PAAF1-212ENST00000543079 GOLGA8CPA6NN73 597 aa12.8□□□□□ -0.36
PAAF1-212ENST00000543079 TSR1Q2NL82 804 aaKnown RBP12.79□□□□□ -0.36
PAAF1-212ENST00000543079 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
PAAF1-212ENST00000543079 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
PAAF1-212ENST00000543079 OSBPP22059 807 aa12.78□□□□□ -0.36
PAAF1-212ENST00000543079 KCNV2Q8TDN2 545 aa12.78□□□□□ -0.36
PAAF1-212ENST00000543079 TRIM6-TRIM34B2RNG4 842 aa12.77□□□□□ -0.37
PAAF1-212ENST00000543079 PRIM1P49642 420 aaKnown RBP12.77□□□□□ -0.37
PAAF1-212ENST00000543079 LAPTM4BQ86VI4 370 aa12.76□□□□□ -0.37
PAAF1-212ENST00000543079 WNT2BQ93097 391 aa12.76□□□□□ -0.37
PAAF1-212ENST00000543079 THSD4Q6ZMP0 1018 aa12.75□□□□□ -0.37
PAAF1-212ENST00000543079 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
PAAF1-212ENST00000543079 PTPN5P54829 565 aa12.73□□□□□ -0.37
PAAF1-212ENST00000543079 PDS5BQ9NTI5 1447 aa12.72□□□□□ -0.37
PAAF1-212ENST00000543079 P3H3Q8IVL6 736 aa12.72□□□□□ -0.37
PAAF1-212ENST00000543079 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
PAAF1-212ENST00000543079 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
PAAF1-212ENST00000543079 PRSS12P56730 875 aa12.69□□□□□ -0.38
PAAF1-212ENST00000543079 ANKK1Q8NFD2 765 aa12.69□□□□□ -0.38
PAAF1-212ENST00000543079 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
PAAF1-212ENST00000543079 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
PAAF1-212ENST00000543079 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
PAAF1-212ENST00000543079 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
PAAF1-212ENST00000543079 MLLT3P42568 568 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-212ENST00000543079 SEPT9Q9UHD8 586 aaPredicted RBP12.67□□□□□ -0.38
PAAF1-212ENST00000543079 LAMC3Q9Y6N6 1575 aa12.67□□□□□ -0.38
PAAF1-212ENST00000543079 BAZ1AQ9NRL2 1556 aaPredicted RBP12.66□□□□□ -0.38
PAAF1-212ENST00000543079 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
PAAF1-212ENST00000543079 CDHR5Q9HBB8 845 aa12.66□□□□□ -0.38
PAAF1-212ENST00000543079 KIF21AQ7Z4S6 1674 aa12.65□□□□□ -0.38
PAAF1-212ENST00000543079 SOWAHBA6NEL2 793 aa12.64□□□□□ -0.39
PAAF1-212ENST00000543079 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
PAAF1-212ENST00000543079 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
PAAF1-212ENST00000543079 FAM198AQ9UFP1 575 aa12.63□□□□□ -0.39
PAAF1-212ENST00000543079 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
PAAF1-212ENST00000543079 MRC2Q9UBG0 1479 aa12.62□□□□□ -0.39
PAAF1-212ENST00000543079 CYB5RLQ6IPT4 315 aa12.62□□□□□ -0.39
PAAF1-212ENST00000543079 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
PAAF1-212ENST00000543079 BCAMP50895 628 aa12.6□□□□□ -0.39
PAAF1-212ENST00000543079 RIMBP3CA6NJZ7 1639 aa12.59□□□□□ -0.39
PAAF1-212ENST00000543079 RIMBP3BA6NNM3 1639 aa12.59□□□□□ -0.39
PAAF1-212ENST00000543079 RIMBP3Q9UFD9 1639 aa12.59□□□□□ -0.39
PAAF1-212ENST00000543079 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
PAAF1-212ENST00000543079 TATDN2Q93075 761 aa12.58□□□□□ -0.4
PAAF1-212ENST00000543079 NBPF26B4DH59 902 aa12.57□□□□□ -0.4
PAAF1-212ENST00000543079 SEMA3EO15041 775 aa12.57□□□□□ -0.4
PAAF1-212ENST00000543079 WDR62O43379 1518 aa12.57□□□□□ -0.4
PAAF1-212ENST00000543079 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
PAAF1-212ENST00000543079 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
PAAF1-212ENST00000543079 LRCH3Q96II8 777 aa12.56□□□□□ -0.4
PAAF1-212ENST00000543079 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.56□□□□□ -0.4
PAAF1-212ENST00000543079 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
PAAF1-212ENST00000543079 SMAPO00193 183 aa12.55□□□□□ -0.4
PAAF1-212ENST00000543079 NYAP1Q6ZVC0 841 aa12.55□□□□□ -0.4
PAAF1-212ENST00000543079 SMARCA4P51532 1647 aa12.55□□□□□ -0.4
PAAF1-212ENST00000543079 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
PAAF1-212ENST00000543079 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
PAAF1-212ENST00000543079 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
PAAF1-212ENST00000543079 TSR3Q9UJK0 312 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms