RNA–Protein interactions for RNA: ENST00000542800.1

C1orf53-203, Transcript of chromosome 1 open reading frame 53, humanhuman

TSL 3

Gene C1orf53, Length 341 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf53-203ENST00000542800 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
C1orf53-203ENST00000542800 COL9A1P20849 921 aa8.58□□□□□ -1.04
C1orf53-203ENST00000542800 PDE4AP27815 886 aa8.58□□□□□ -1.04
C1orf53-203ENST00000542800 RYDENQ9NUL5 291 aaKnown RBP8.58□□□□□ -1.04
C1orf53-203ENST00000542800 FBXW7Q969H0 707 aa8.57□□□□□ -1.04
C1orf53-203ENST00000542800 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
C1orf53-203ENST00000542800 CCDC180Q9P1Z9 1646 aa8.56□□□□□ -1.04
C1orf53-203ENST00000542800 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
C1orf53-203ENST00000542800 KIAA1468Q9P260 1216 aa8.56□□□□□ -1.04
C1orf53-203ENST00000542800 TSR3Q9UJK0 312 aaKnown RBP8.56□□□□□ -1.04
C1orf53-203ENST00000542800 TYW1BQ6NUM6 668 aa8.54□□□□□ -1.04
C1orf53-203ENST00000542800 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.54□□□□□ -1.04
C1orf53-203ENST00000542800 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
C1orf53-203ENST00000542800 FAM98CQ17RN3 349 aaKnown RBP8.53□□□□□ -1.04
C1orf53-203ENST00000542800 LRCH3Q96II8 777 aa8.53□□□□□ -1.04
C1orf53-203ENST00000542800 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
C1orf53-203ENST00000542800 PHF14O94880 888 aa8.52□□□□□ -1.05
C1orf53-203ENST00000542800 ZNF787Q6DD87 383 aa8.52□□□□□ -1.05
C1orf53-203ENST00000542800 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
C1orf53-203ENST00000542800 SEPT9Q9UHD8 586 aaPredicted RBP8.52□□□□□ -1.05
C1orf53-203ENST00000542800 DDX27Q96GQ7 796 aaKnown RBP8.51□□□□□ -1.05
C1orf53-203ENST00000542800 V9GY48 417 aaPredicted RBP8.51□□□□□ -1.05
C1orf53-203ENST00000542800 DNAJC5Q9H3Z4 198 aa8.5□□□□□ -1.05
C1orf53-203ENST00000542800 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
C1orf53-203ENST00000542800 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
C1orf53-203ENST00000542800 LARP6Q9BRS8 491 aaKnown RBP8.47□□□□□ -1.05
C1orf53-203ENST00000542800 NKX1-1Q15270 411 aaPredicted RBP8.46□□□□□ -1.06
C1orf53-203ENST00000542800 C6orf132Q5T0Z8 1188 aa8.46□□□□□ -1.06
C1orf53-203ENST00000542800 ZNF775Q96BV0 537 aaPredicted RBP8.46□□□□□ -1.06
C1orf53-203ENST00000542800 PPP4CP60510 307 aa8.45□□□□□ -1.06
C1orf53-203ENST00000542800 MFSD10Q14728 455 aa8.45□□□□□ -1.06
C1orf53-203ENST00000542800 TJAP1Q5JTD0 557 aa8.45□□□□□ -1.06
C1orf53-203ENST00000542800 EPAS1Q99814 870 aa8.45□□□□□ -1.06
C1orf53-203ENST00000542800 EMILIN3Q9NT22 766 aa8.45□□□□□ -1.06
C1orf53-203ENST00000542800 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
C1orf53-203ENST00000542800 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
C1orf53-203ENST00000542800 IL21Q9HBE4 155 aa8.42□□□□□ -1.06
C1orf53-203ENST00000542800 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
C1orf53-203ENST00000542800 MTRQ99707 1265 aa8.4□□□□□ -1.06
C1orf53-203ENST00000542800 PACS2Q86VP3 889 aa8.39□□□□□ -1.07
C1orf53-203ENST00000542800 ZCCHC6Q5VYS8 1495 aaKnown RBP8.38□□□□□ -1.07
C1orf53-203ENST00000542800 GGCXP38435 758 aa8.35□□□□□ -1.07
C1orf53-203ENST00000542800 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
C1orf53-203ENST00000542800 SAMD7Q7Z3H4 446 aa8.34□□□□□ -1.07
C1orf53-203ENST00000542800 TSKSQ9UJT2 592 aa8.34□□□□□ -1.07
C1orf53-203ENST00000542800 ZNF516Q92618 1163 aa8.31□□□□□ -1.08
C1orf53-203ENST00000542800 EN1Q05925 392 aaPredicted RBP8.3□□□□□ -1.08
C1orf53-203ENST00000542800 TMUB1Q9BVT8 246 aa8.3□□□□□ -1.08
C1orf53-203ENST00000542800 GTPBP6O43824 516 aaPredicted RBP8.29□□□□□ -1.08
C1orf53-203ENST00000542800 DPYSL4O14531 572 aa8.28□□□□□ -1.08
C1orf53-203ENST00000542800 CAMK2BQ13554 666 aa8.28□□□□□ -1.08
C1orf53-203ENST00000542800 PKDCCQ504Y2 493 aa8.28□□□□□ -1.08
C1orf53-203ENST00000542800 NECTIN2Q92692 538 aa8.28□□□□□ -1.08
C1orf53-203ENST00000542800 DDX12PQ92771 950 aa8.28□□□□□ -1.08
C1orf53-203ENST00000542800 SMAPO00193 183 aa8.27□□□□□ -1.09
C1orf53-203ENST00000542800 MAP3K7O43318 606 aa8.27□□□□□ -1.09
C1orf53-203ENST00000542800 DGAT1O75907 488 aa8.27□□□□□ -1.09
C1orf53-203ENST00000542800 NBPF26B4DH59 902 aa8.26□□□□□ -1.09
C1orf53-203ENST00000542800 APLP1P51693 650 aa8.26□□□□□ -1.09
C1orf53-203ENST00000542800 HDGFP51858 240 aaKnown RBP8.26□□□□□ -1.09
C1orf53-203ENST00000542800 MYT1Q01538 1121 aa8.26□□□□□ -1.09
C1orf53-203ENST00000542800 NBR1Q14596 966 aa8.26□□□□□ -1.09
C1orf53-203ENST00000542800 TSR1Q2NL82 804 aaKnown RBP8.26□□□□□ -1.09
C1orf53-203ENST00000542800 NKX2-3Q8TAU0 364 aa8.26□□□□□ -1.09
C1orf53-203ENST00000542800 CDCA7LQ96GN5 454 aa8.26□□□□□ -1.09
C1orf53-203ENST00000542800 RNF40O75150 1001 aa8.25□□□□□ -1.09
C1orf53-203ENST00000542800 PRSS12P56730 875 aa8.25□□□□□ -1.09
C1orf53-203ENST00000542800 TRIM67Q6ZTA4 783 aa8.25□□□□□ -1.09
C1orf53-203ENST00000542800 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
C1orf53-203ENST00000542800 TATDN2Q93075 761 aa8.24□□□□□ -1.09
C1orf53-203ENST00000542800 DCAF1Q9Y4B6 1507 aa8.24□□□□□ -1.09
C1orf53-203ENST00000542800 TREML4Q6UXN2 200 aa8.23□□□□□ -1.09
C1orf53-203ENST00000542800 PNMA3Q9UL41 463 aa8.23□□□□□ -1.09
C1orf53-203ENST00000542800 PRR20EP86478 221 aa8.22□□□□□ -1.09
C1orf53-203ENST00000542800 PRR20CP86479 221 aa8.22□□□□□ -1.09
C1orf53-203ENST00000542800 PRR20DP86480 221 aa8.22□□□□□ -1.09
C1orf53-203ENST00000542800 PRR20BP86481 221 aa8.22□□□□□ -1.09
C1orf53-203ENST00000542800 PRR20AP86496 221 aa8.22□□□□□ -1.09
C1orf53-203ENST00000542800 FAM198AQ9UFP1 575 aa8.22□□□□□ -1.09
C1orf53-203ENST00000542800 POTECB2RU33 542 aa8.21□□□□□ -1.1
C1orf53-203ENST00000542800 SLC19A1P41440 591 aa8.21□□□□□ -1.1
C1orf53-203ENST00000542800 COPS2P61201 443 aa8.21□□□□□ -1.1
C1orf53-203ENST00000542800 ZPR1O75312 459 aa8.19□□□□□ -1.1
C1orf53-203ENST00000542800 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
C1orf53-203ENST00000542800 CADPS2Q86UW7 1296 aa8.19□□□□□ -1.1
C1orf53-203ENST00000542800 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
C1orf53-203ENST00000542800 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
C1orf53-203ENST00000542800 ZNF598Q86UK7 904 aaKnown RBP8.18□□□□□ -1.1
C1orf53-203ENST00000542800 RNF223E7ERA6 249 aa8.17□□□□□ -1.1
C1orf53-203ENST00000542800 PDIA6Q15084 440 aa8.17□□□□□ -1.1
C1orf53-203ENST00000542800 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
C1orf53-203ENST00000542800 FAM187AA6NFU0 413 aa8.16□□□□□ -1.1
C1orf53-203ENST00000542800 NUDT18Q6ZVK8 323 aa8.16□□□□□ -1.1
C1orf53-203ENST00000542800 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
C1orf53-203ENST00000542800 RBM27Q9P2N5 1060 aaKnown RBP8.16□□□□□ -1.1
C1orf53-203ENST00000542800 EMID1Q96A84 441 aaPredicted RBP8.15□□□□□ -1.1
C1orf53-203ENST00000542800 SPDYE16A6NNV3 312 aaPredicted RBP8.14□□□□□ -1.11
C1orf53-203ENST00000542800 SLC4A3P48751 1232 aa8.14□□□□□ -1.11
C1orf53-203ENST00000542800 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
C1orf53-203ENST00000542800 ZNF697Q5TEC3 545 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms