RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CCDC7Q96M83 1385 aa19.94■□□□□ 0.78
LDB3-207ENST00000542786 KDM5CP41229 1560 aa19.94■□□□□ 0.78
LDB3-207ENST00000542786 VWDEQ8N2E2 1590 aa19.94■□□□□ 0.78
LDB3-207ENST00000542786 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
LDB3-207ENST00000542786 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
LDB3-207ENST00000542786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.78
LDB3-207ENST00000542786 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
LDB3-207ENST00000542786 CFAP74Q9C0B2 1584 aa19.91■□□□□ 0.78
LDB3-207ENST00000542786 MROH1Q8NDA8 1641 aa19.91■□□□□ 0.78
LDB3-207ENST00000542786 KIDINS220Q9ULH0 1771 aa19.9■□□□□ 0.78
LDB3-207ENST00000542786 NPM1P06748 294 aaKnown RBP eCLIP19.9■□□□□ 0.78
LDB3-207ENST00000542786 E9PCH4 1651 aa19.9■□□□□ 0.78
LDB3-207ENST00000542786 CNTLNQ9NXG0 1405 aa19.9■□□□□ 0.78
LDB3-207ENST00000542786 BCORL1Q5H9F3 1711 aa19.89■□□□□ 0.77
LDB3-207ENST00000542786 USP47Q96K76 1375 aa19.89■□□□□ 0.77
LDB3-207ENST00000542786 A2MP01023 1474 aa19.89■□□□□ 0.77
LDB3-207ENST00000542786 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
LDB3-207ENST00000542786 PRDM15P57071 1507 aaPredicted RBP19.88■□□□□ 0.77
LDB3-207ENST00000542786 TET3O43151 1660 aa19.87■□□□□ 0.77
LDB3-207ENST00000542786 PRAG1Q86YV5 1406 aa19.87■□□□□ 0.77
LDB3-207ENST00000542786 ANP32CO43423 234 aa19.87■□□□□ 0.77
LDB3-207ENST00000542786 GTF3C3Q9Y5Q9 886 aa19.87■□□□□ 0.77
LDB3-207ENST00000542786 ZNF518AQ6AHZ1 1483 aa19.87■□□□□ 0.77
LDB3-207ENST00000542786 DHX29Q7Z478 1369 aaKnown RBP19.86■□□□□ 0.77
LDB3-207ENST00000542786 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
LDB3-207ENST00000542786 PTPRTO14522 1441 aa19.86■□□□□ 0.77
LDB3-207ENST00000542786 POGZQ7Z3K3 1410 aa19.86■□□□□ 0.77
LDB3-207ENST00000542786 TRPM1Q7Z4N2 1603 aa19.86■□□□□ 0.77
LDB3-207ENST00000542786 TRPM2O94759 1503 aa19.85■□□□□ 0.77
LDB3-207ENST00000542786 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.76
LDB3-207ENST00000542786 DCAF11Q8TEB1 546 aa19.83■□□□□ 0.76
LDB3-207ENST00000542786 MLH3Q9UHC1 1453 aa19.81■□□□□ 0.76
LDB3-207ENST00000542786 RNF17Q9BXT8 1623 aaKnown RBP19.81■□□□□ 0.76
LDB3-207ENST00000542786 NEO1Q92859 1461 aa19.81■□□□□ 0.76
LDB3-207ENST00000542786 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
LDB3-207ENST00000542786 FRMPD1Q5SYB0 1578 aa19.81■□□□□ 0.76
LDB3-207ENST00000542786 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
LDB3-207ENST00000542786 LAMC1P11047 1609 aa19.8■□□□□ 0.76
LDB3-207ENST00000542786 RIMBP3CA6NJZ7 1639 aa19.79■□□□□ 0.76
LDB3-207ENST00000542786 RIMBP3BA6NNM3 1639 aa19.79■□□□□ 0.76
LDB3-207ENST00000542786 RIMBP3Q9UFD9 1639 aa19.79■□□□□ 0.76
LDB3-207ENST00000542786 MAP3K4Q9Y6R4 1608 aa19.79■□□□□ 0.76
LDB3-207ENST00000542786 HECW2Q9P2P5 1572 aa19.78■□□□□ 0.76
LDB3-207ENST00000542786 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
LDB3-207ENST00000542786 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
LDB3-207ENST00000542786 LMTK2Q8IWU2 1503 aa19.77■□□□□ 0.76
LDB3-207ENST00000542786 CEP152O94986 1710 aa19.77■□□□□ 0.76
LDB3-207ENST00000542786 GLI2P10070 1586 aa19.77■□□□□ 0.76
LDB3-207ENST00000542786 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
LDB3-207ENST00000542786 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
LDB3-207ENST00000542786 NEURL4Q96JN8 1562 aa19.75■□□□□ 0.75
LDB3-207ENST00000542786 EFCAB6Q5THR3 1501 aa19.75■□□□□ 0.75
LDB3-207ENST00000542786 KANK1Q14678 1352 aa19.75■□□□□ 0.75
LDB3-207ENST00000542786 KIF3BO15066 747 aa19.75■□□□□ 0.75
LDB3-207ENST00000542786 ABCA6Q8N139 1617 aa19.75■□□□□ 0.75
LDB3-207ENST00000542786 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
LDB3-207ENST00000542786 PPRC1Q5VV67 1664 aaKnown RBP19.73■□□□□ 0.75
LDB3-207ENST00000542786 RGL3Q3MIN7 710 aa19.72■□□□□ 0.75
LDB3-207ENST00000542786 MADDQ8WXG6 1647 aa19.72■□□□□ 0.75
LDB3-207ENST00000542786 RICTORQ6R327 1708 aa19.7■□□□□ 0.74
LDB3-207ENST00000542786 PRKRIP1Q9H875 184 aaPredicted RBP19.69■□□□□ 0.74
LDB3-207ENST00000542786 NBPF1Q3BBV0 1214 aa19.68■□□□□ 0.74
LDB3-207ENST00000542786 DIP2CQ9Y2E4 1556 aa19.67■□□□□ 0.74
LDB3-207ENST00000542786 ST20-MTHFSA0A0A6YYL1 179 aa19.67■□□□□ 0.74
LDB3-207ENST00000542786 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
LDB3-207ENST00000542786 MYT1LQ9UL68 1186 aa19.66■□□□□ 0.74
LDB3-207ENST00000542786 DIP2BQ9P265 1576 aa19.65■□□□□ 0.74
LDB3-207ENST00000542786 UGGT1Q9NYU2 1555 aa19.64■□□□□ 0.73
LDB3-207ENST00000542786 ABCC3O15438 1527 aa19.63■□□□□ 0.73
LDB3-207ENST00000542786 RAPGEF3O95398 923 aa19.62■□□□□ 0.73
LDB3-207ENST00000542786 COL17A1Q9UMD9 1497 aaPredicted RBP19.61■□□□□ 0.73
LDB3-207ENST00000542786 IQGAP1P46940 1657 aa19.61■□□□□ 0.73
LDB3-207ENST00000542786 CCDC184Q52MB2 194 aa19.61■□□□□ 0.73
LDB3-207ENST00000542786 STAC3Q96MF2 364 aa19.61■□□□□ 0.73
LDB3-207ENST00000542786 NPATQ14207 1427 aa19.6■□□□□ 0.73
LDB3-207ENST00000542786 IFT172Q9UG01 1749 aa19.6■□□□□ 0.73
LDB3-207ENST00000542786 TESK2Q96S53 571 aa19.6■□□□□ 0.73
LDB3-207ENST00000542786 MYOM2P54296 1465 aa19.6■□□□□ 0.73
LDB3-207ENST00000542786 ZMYM4Q5VZL5 1548 aa19.6■□□□□ 0.73
LDB3-207ENST00000542786 KIAA1210Q9ULL0 1709 aa19.59■□□□□ 0.73
LDB3-207ENST00000542786 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
LDB3-207ENST00000542786 ADGRB3O60242 1522 aa19.59■□□□□ 0.73
LDB3-207ENST00000542786 YEATS2Q9ULM3 1422 aa19.57■□□□□ 0.72
LDB3-207ENST00000542786 NRXN1Q9ULB1 1477 aa19.56■□□□□ 0.72
LDB3-207ENST00000542786 CAMSAP1Q5T5Y3 1602 aa19.56■□□□□ 0.72
LDB3-207ENST00000542786 KIF1BO60333 1816 aa19.56■□□□□ 0.72
LDB3-207ENST00000542786 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
LDB3-207ENST00000542786 SIGLEC1Q9BZZ2 1709 aa19.53■□□□□ 0.72
LDB3-207ENST00000542786 NOS1P29475 1434 aa19.52■□□□□ 0.72
LDB3-207ENST00000542786 ZC3H13Q5T200 1668 aaKnown RBP19.51■□□□□ 0.71
LDB3-207ENST00000542786 SCAF11Q99590 1463 aaKnown RBP19.51■□□□□ 0.71
LDB3-207ENST00000542786 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
LDB3-207ENST00000542786 POLR3GLQ9BT43 218 aa19.5■□□□□ 0.71
LDB3-207ENST00000542786 ARHGAP31Q2M1Z3 1444 aa19.5■□□□□ 0.71
LDB3-207ENST00000542786 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
LDB3-207ENST00000542786 GGT6Q6P531 493 aa19.49■□□□□ 0.71
LDB3-207ENST00000542786 DNAJC5Q9H3Z4 198 aa19.49■□□□□ 0.71
LDB3-207ENST00000542786 SYNMO15061 1565 aa19.49■□□□□ 0.71
LDB3-207ENST00000542786 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
LDB3-207ENST00000542786 REREQ9P2R6 1566 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms