RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 DPYSL4O14531 572 aa7.18□□□□□ -1.26
KNTC1-213ENST00000542727 RABGEF1Q9UJ41 708 aa7.18□□□□□ -1.26
KNTC1-213ENST00000542727 SPDYE16A6NNV3 312 aaPredicted RBP7.17□□□□□ -1.26
KNTC1-213ENST00000542727 ONECUT3O60422 494 aaPredicted RBP7.17□□□□□ -1.26
KNTC1-213ENST00000542727 PDIA6Q15084 440 aa7.16□□□□□ -1.26
KNTC1-213ENST00000542727 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
KNTC1-213ENST00000542727 LAPTM4BQ86VI4 370 aa7.15□□□□□ -1.26
KNTC1-213ENST00000542727 WNT2BQ93097 391 aa7.15□□□□□ -1.26
KNTC1-213ENST00000542727 ARIH1Q9Y4X5 557 aaPredicted RBP7.15□□□□□ -1.26
KNTC1-213ENST00000542727 E2F4Q16254 413 aa7.14□□□□□ -1.27
KNTC1-213ENST00000542727 C6orf132Q5T0Z8 1188 aa7.14□□□□□ -1.27
KNTC1-213ENST00000542727 WDR70Q9NW82 654 aa7.14□□□□□ -1.27
KNTC1-213ENST00000542727 PAXIP1Q6ZW49 1069 aaPredicted RBP7.13□□□□□ -1.27
KNTC1-213ENST00000542727 CFAP44Q96MT7 982 aa7.13□□□□□ -1.27
KNTC1-213ENST00000542727 COL9A1P20849 921 aa7.12□□□□□ -1.27
KNTC1-213ENST00000542727 PTPN5P54829 565 aa7.12□□□□□ -1.27
KNTC1-213ENST00000542727 IFFO2Q5TF58 517 aa7.12□□□□□ -1.27
KNTC1-213ENST00000542727 ANKK1Q8NFD2 765 aa7.12□□□□□ -1.27
KNTC1-213ENST00000542727 EN1Q05925 392 aaPredicted RBP7.11□□□□□ -1.27
KNTC1-213ENST00000542727 PROX2Q3B8N5 592 aa7.11□□□□□ -1.27
KNTC1-213ENST00000542727 NBR1Q14596 966 aa7.1□□□□□ -1.27
KNTC1-213ENST00000542727 NYAP1Q6ZVC0 841 aa7.1□□□□□ -1.27
KNTC1-213ENST00000542727 DDX12PQ92771 950 aa7.1□□□□□ -1.27
KNTC1-213ENST00000542727 TRIM6-TRIM34B2RNG4 842 aa7.09□□□□□ -1.27
KNTC1-213ENST00000542727 CERKQ8TCT0 537 aa7.09□□□□□ -1.27
KNTC1-213ENST00000542727 MAP3K7O43318 606 aa7.08□□□□□ -1.28
KNTC1-213ENST00000542727 KIAA1468Q9P260 1216 aa7.08□□□□□ -1.28
KNTC1-213ENST00000542727 RGS20O76081 388 aa7.07□□□□□ -1.28
KNTC1-213ENST00000542727 FAM98CQ17RN3 349 aaKnown RBP7.07□□□□□ -1.28
KNTC1-213ENST00000542727 RBM33Q96EV2 1170 aaKnown RBP7.07□□□□□ -1.28
KNTC1-213ENST00000542727 SOWAHBA6NEL2 793 aa7.06□□□□□ -1.28
KNTC1-213ENST00000542727 ZFRQ96KR1 1074 aaKnown RBP7.06□□□□□ -1.28
KNTC1-213ENST00000542727 PACS2Q86VP3 889 aa7.05□□□□□ -1.28
KNTC1-213ENST00000542727 TSR1Q2NL82 804 aaKnown RBP7.03□□□□□ -1.28
KNTC1-213ENST00000542727 RBM27Q9P2N5 1060 aaKnown RBP7.03□□□□□ -1.28
KNTC1-213ENST00000542727 ITGBL1O95965 494 aaPredicted RBP7.02□□□□□ -1.29
KNTC1-213ENST00000542727 BCAMP50895 628 aa7.02□□□□□ -1.29
KNTC1-213ENST00000542727 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
KNTC1-213ENST00000542727 SEPT9Q9UHD8 586 aaPredicted RBP7.02□□□□□ -1.29
KNTC1-213ENST00000542727 A0A0G2JS52 829 aa7.01□□□□□ -1.29
KNTC1-213ENST00000542727 GRXCR2A6NFK2 248 aa7.01□□□□□ -1.29
KNTC1-213ENST00000542727 PRSS12P56730 875 aa7.01□□□□□ -1.29
KNTC1-213ENST00000542727 CDCA7LQ96GN5 454 aa7.01□□□□□ -1.29
KNTC1-213ENST00000542727 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.01□□□□□ -1.29
KNTC1-213ENST00000542727 TSKSQ9UJT2 592 aa7.01□□□□□ -1.29
KNTC1-213ENST00000542727 NBPF26B4DH59 902 aa7□□□□□ -1.29
KNTC1-213ENST00000542727 TSR3Q9UJK0 312 aaKnown RBP7□□□□□ -1.29
KNTC1-213ENST00000542727 OSBPP22059 807 aa6.99□□□□□ -1.29
KNTC1-213ENST00000542727 ARHGEF1Q92888 912 aaKnown RBP6.99□□□□□ -1.29
KNTC1-213ENST00000542727 WBP1LQ9NX94 342 aa6.98□□□□□ -1.29
KNTC1-213ENST00000542727 NECTIN2Q92692 538 aa6.97□□□□□ -1.29
KNTC1-213ENST00000542727 HPS5Q9UPZ3 1129 aa6.97□□□□□ -1.29
KNTC1-213ENST00000542727 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
KNTC1-213ENST00000542727 PRIM1P49642 420 aaKnown RBP6.95□□□□□ -1.3
KNTC1-213ENST00000542727 HDGFP51858 240 aaKnown RBP6.95□□□□□ -1.3
KNTC1-213ENST00000542727 KCNC4Q03721 635 aa6.95□□□□□ -1.3
KNTC1-213ENST00000542727 TATDN2Q93075 761 aa6.95□□□□□ -1.3
KNTC1-213ENST00000542727 PPP4CP60510 307 aa6.94□□□□□ -1.3
KNTC1-213ENST00000542727 PNMA3Q9UL41 463 aa6.94□□□□□ -1.3
KNTC1-213ENST00000542727 TTC13Q8NBP0 860 aa6.93□□□□□ -1.3
KNTC1-213ENST00000542727 CDHR5Q9HBB8 845 aa6.93□□□□□ -1.3
KNTC1-213ENST00000542727 TSHZ2Q9NRE2 1034 aa6.93□□□□□ -1.3
KNTC1-213ENST00000542727 SAMD7Q7Z3H4 446 aa6.92□□□□□ -1.3
KNTC1-213ENST00000542727 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
KNTC1-213ENST00000542727 FAM198AQ9UFP1 575 aa6.92□□□□□ -1.3
KNTC1-213ENST00000542727 SLC4A3P48751 1232 aa6.91□□□□□ -1.3
KNTC1-213ENST00000542727 NUDT18Q6ZVK8 323 aa6.91□□□□□ -1.3
KNTC1-213ENST00000542727 SMAPO00193 183 aa6.9□□□□□ -1.3
KNTC1-213ENST00000542727 PADI6Q6TGC4 694 aa6.89□□□□□ -1.31
KNTC1-213ENST00000542727 SLF2Q8IX21 1173 aa6.89□□□□□ -1.31
KNTC1-213ENST00000542727 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
KNTC1-213ENST00000542727 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
KNTC1-213ENST00000542727 PRR14Q9BWN1 585 aa6.87□□□□□ -1.31
KNTC1-213ENST00000542727 C3orf80F5H4A9 247 aa6.86□□□□□ -1.31
KNTC1-213ENST00000542727 RNF40O75150 1001 aa6.86□□□□□ -1.31
KNTC1-213ENST00000542727 MLLT3P42568 568 aaPredicted RBP6.86□□□□□ -1.31
KNTC1-213ENST00000542727 PTGDRQ13258 359 aa6.86□□□□□ -1.31
KNTC1-213ENST00000542727 IL21Q9HBE4 155 aa6.86□□□□□ -1.31
KNTC1-213ENST00000542727 TJAP1Q5JTD0 557 aa6.85□□□□□ -1.31
KNTC1-213ENST00000542727 SWT1Q5T5J6 900 aaKnown RBP6.84□□□□□ -1.31
KNTC1-213ENST00000542727 RBM46Q8TBY0 533 aaKnown RBP6.84□□□□□ -1.31
KNTC1-213ENST00000542727 EYA1Q99502 592 aa6.84□□□□□ -1.31
KNTC1-213ENST00000542727 MTRQ99707 1265 aa6.84□□□□□ -1.31
KNTC1-213ENST00000542727 PLCB2Q00722 1185 aa6.83□□□□□ -1.32
KNTC1-213ENST00000542727 FCHSD2O94868 740 aa6.82□□□□□ -1.32
KNTC1-213ENST00000542727 DNAJB2P25686 324 aa6.82□□□□□ -1.32
KNTC1-213ENST00000542727 APLP1P51693 650 aa6.82□□□□□ -1.32
KNTC1-213ENST00000542727 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
KNTC1-213ENST00000542727 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
KNTC1-213ENST00000542727 NUTM2FA1L443 756 aa6.8□□□□□ -1.32
KNTC1-213ENST00000542727 ADGRG1Q9Y653 693 aa6.8□□□□□ -1.32
KNTC1-213ENST00000542727 GGCXP38435 758 aa6.79□□□□□ -1.32
KNTC1-213ENST00000542727 TMEM134Q9H6X4 195 aa6.79□□□□□ -1.32
KNTC1-213ENST00000542727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.78□□□□□ -1.32
KNTC1-213ENST00000542727 SEMA3EO15041 775 aa6.78□□□□□ -1.32
KNTC1-213ENST00000542727 V9GY48 417 aaPredicted RBP6.78□□□□□ -1.32
KNTC1-213ENST00000542727 OATP04181 439 aa6.77□□□□□ -1.33
KNTC1-213ENST00000542727 HIC1Q14526 733 aa6.77□□□□□ -1.33
KNTC1-213ENST00000542727 KMT5BQ4FZB7 885 aa6.77□□□□□ -1.33
KNTC1-213ENST00000542727 PPP1R18Q6NYC8 613 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms